File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/e8fabff0c84a6ef0c0d7db532e3fa4/.command.err
Size
557 bytes
Task
NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (tih_rna_sample_00588_B23MVV7LT4_1)
Attempt

Content

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Processing Kallisto file: tih_rna_sample_00588_B23MVV7LT4_1/abundance.h5
Successfully converted tih_rna_sample_00588_B23MVV7LT4_1/abundance.h5 to tih_rna_sample_00588_B23MVV7LT4_1_kallisto_mqc.tsv
  Sample: tih_rna_sample_00588_B23MVV7LT4_1
  Mean Fragment Length: 143.8 bp
  Median Fragment Length: 129.0 bp
  pct_mito_est_counts: 0.01%
  pct_ribo_est_counts: 1.064%
  pct_hk_est_counts: 0.418%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.023%
  pct_ribo_tpm: 3.315%
  pct_hk_tpm: 0.645%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.008%