Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/06/eaf36033706345ffd4f5992eba9beb/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d1/25020835817369b2eddaff6731154a/tih_rna_sample_00677_B23MVV7LT4_1.star_alignment.Aligned.sortedByCoord.out.cram Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/06/eaf36033706345ffd4f5992eba9beb/.command.run ==> STAGING COMPLETE (3 inputs) ls: *.bai: No such file or directory ls: *.csi: No such file or directory