AIH curated blacklist: matched 4 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 191
Pass (FILTER=PASS): 34 (17.8%)
Fail (FILTER=FAIL): 157 (82.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 4
All 4 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 27
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 22
confidence_below_min(medium<high): 21
confidence_below_min(low<high): 16
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 2
confidence_below_min(medium<high);aih_curated_blacklist: 2
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 2
Breakdown by confidence:
high: 34 pass, 2 fail (total: 36)
low: 0 pass, 96 fail (total: 96)
medium: 0 pass, 59 fail (total: 59)
Arriba filter: 191 rows -> 34 PASS; wrote tih_rna_sample_00639_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00639_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00639_B23MVV7LT4_1.arriba.fusions.filter_summary.txt