Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/12611a5903169ba3ab29bd47d9e942/tih_rna_sample_00761_B23MVV7LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/bf46cc3ec86b44097960c44c147ecb/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/bf46cc3ec86b44097960c44c147ecb/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory