AIH curated blacklist: matched 6 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 179
Pass (FILTER=PASS): 6 (3.4%)
Fail (FILTER=FAIL): 173 (96.6%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 6
All 6 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 63
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 19
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 17
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(low<high): 9
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 2
aih_curated_blacklist: 1
total_reads_below_min(3.0<8.0): 1
Breakdown by confidence:
high: 6 pass, 2 fail (total: 8)
low: 0 pass, 55 fail (total: 55)
medium: 0 pass, 116 fail (total: 116)
Arriba filter: 179 rows -> 6 PASS; wrote tih_rna_sample_00660_B23MVV7LT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00660_B23MVV7LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00660_B23MVV7LT4_1.arriba.fusions.filter_summary.txt