File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/e08130e20b9b2ef0997316c3a2b1a7/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:26:50
                             Started mapping on |	Jun 08 10:33:57
                                    Finished on |	Jun 08 12:06:34
       Mapping speed, Million of reads per hour |	191.51

                          Number of input reads |	295611244
                      Average input read length |	270
                                    UNIQUE READS:
                   Uniquely mapped reads number |	284420441
                        Uniquely mapped reads % |	96.21%
                          Average mapped length |	269.11
                       Number of splices: Total |	378666782
            Number of splices: Annotated (sjdb) |	374612741
                       Number of splices: GT/AG |	374924312
                       Number of splices: GC/AG |	2282601
                       Number of splices: AT/AC |	267552
               Number of splices: Non-canonical |	1192317
                      Mismatch rate per base, % |	0.20%
                         Deletion rate per base |	0.02%
                        Deletion average length |	1.77
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.75
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	7354649
             % of reads mapped to multiple loci |	2.49%
        Number of reads mapped to too many loci |	385941
             % of reads mapped to too many loci |	0.13%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	3120323
                 % of reads unmapped: too short |	1.06%
                Number of reads unmapped: other |	329890
                     % of reads unmapped: other |	0.11%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%