nfcore/rnafusion summary report

Databases: COSMIC Mitelman FusionGDB2

Score: 0.625 (explain)

Explained score: 0.5 * (0.125 + 0.125) + 0.5 * (0.500 + 0.500 + 0.000)

position: chr1:156130773:+#chr1:156874906:+
junction_reads: 339
spanning_reads: 6
ffmp: 1.7297

position: chr1:156130773#chr1:156874906
reading-frame: in-frame
type: deletion
split_reads1: 162
split_reads2: 167
discordant_mates: 5
coverage1: 11895
coverage2: 3415
confidence: high

{'starfusion': {'position': 'chr1:156130773:+#chr1:156874906:+', 'junction_reads': 339, 'spanning_reads': 6, 'ffmp': 1.7297}, 'arriba': {'position': 'chr1:156130773#chr1:156874906', 'reading-frame': 'in-frame', 'type': 'deletion', 'split_reads1': '162', 'split_reads2': '167', 'discordant_mates': '5', 'coverage1': '11895', 'coverage2': '3415', 'confidence': 'high'}}

LMNA--NTRK1