NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (tih_rna_sample_00668_B23MVV7LT4_1) - dev_rna_exp0017-73d51683 - Workflow Tracker

Runs
dev_rna_exp0017-73d51683
Tasks
GATK4_MARKDUPLICATES (tih_rna_sample_00668_B23MVV7LT4_1)

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Task Info

Status: succeeded
Hash: f9bed874a96e
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: tih_rna_sample_00668_B23MVV7LT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 5f/ffbabd
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/ffbabd255baf597253a8a017603418
Native ID: nf-5fffbabd255baf597253a8a017603418-7ee75

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.4 / 2
Memory (peak / alloc): 96.3 GB / 148.0 GB
Process I/O (rchar / wchar): 54.3 GB / 36.2 GB
Disk I/O (read / write): - / 36.2 GB
Host: i-00609bbcb2c4c3a7c ( on-demand)

Runtime

Submitted: Jun 08, 2026 2:26:51 AM
Completed: Jun 08, 2026 3:19:06 AM
Total Duration: 52m 14s

Phases

Queue: 39s
Execution: 49m 19s
Stage/Unstage: 2m 16s

Attempt 1

Execution

Status: failed
Hash: cd/4cf56a
Failure Reason: spot eviction ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/4cf56a4578894b5c4e6a0685730f33
Native ID: nf-cd4cf56a4578894b5c4e6a0685730f33-48fb6

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 74.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-01564d74d601ffe69 ( spot)

Runtime

Submitted: Jun 08, 2026 2:00:41 AM
Completed: Jun 08, 2026 2:26:51 AM
Total Duration: 26m 10s

Phases

Queue: 26m 10s
Execution: -
Stage/Unstage: -