File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/b9058e06b8af90a932515c2a3b1bcf/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:10:33
                             Started mapping on |	Jun 08 10:17:14
                                    Finished on |	Jun 08 11:17:13
       Mapping speed, Million of reads per hour |	296.43

                          Number of input reads |	296348474
                      Average input read length |	270
                                    UNIQUE READS:
                   Uniquely mapped reads number |	279190475
                        Uniquely mapped reads % |	94.21%
                          Average mapped length |	269.55
                       Number of splices: Total |	338187130
            Number of splices: Annotated (sjdb) |	333129452
                       Number of splices: GT/AG |	334252013
                       Number of splices: GC/AG |	2366212
                       Number of splices: AT/AC |	324255
               Number of splices: Non-canonical |	1244650
                      Mismatch rate per base, % |	0.17%
                         Deletion rate per base |	0.02%
                        Deletion average length |	1.93
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.79
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	13694748
             % of reads mapped to multiple loci |	4.62%
        Number of reads mapped to too many loci |	427860
             % of reads mapped to too many loci |	0.14%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2712969
                 % of reads unmapped: too short |	0.92%
                Number of reads unmapped: other |	322422
                     % of reads unmapped: other |	0.11%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%