[W::hts_idx_load3] The index file is older than the data file: FFPE_HD789_01_RNA_13_B23MVV7LT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	380356838
Known Splicing Events:	377149204
Partial Novel Splicing Events:	2238084
Novel Splicing Events:	873632
Filtered Splicing Events:	95918

Total splicing  Junctions:	661173
Known Splicing Junctions:	309708
Partial Novel Splicing Junctions:	232168
Novel Splicing Junctions:	119297

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Create BED file ...
Create Interact file ...