#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
AKAP13--GOLGA6L3	517	0	517.00	0.00	AKAP13^ENSG00000170776.22	20334	chr15:85585823:+	GOLGA6L3^ENSG00000188388.10	65982	chr15:85242220:+	ONLY_REF_SPLICE	YES	1698	59	0.30	8.63	GT	1.8062	AG	1.7819	1.7534	2301	0
ZNF207--IKZF3	354	7	354.00	6.92	ZNF207^ENSG00000010244.19	2781	chr17:32351912:+	IKZF3^ENSG00000161405.17	28761	chr17:39832151:-	ONLY_REF_SPLICE	YES	1086	211	0.33	1.71	GT	1.9656	AG	1.5546	1.2241	3143	0
ZNF207--IKZF3	10	3	10.00	0.08	ZNF207^ENSG00000010244.19	2781	chr17:32351912:+	IKZF3^ENSG00000161405.17	29815	chr17:39829488:-	ONLY_REF_SPLICE	YES	1086	437	0.01	0.03	GT	1.9656	AG	1.9329	0.0342	2490	0
ZNF207--IKZF3	1	1	1.00	0.00	ZNF207^ENSG00000010244.19	2781	chr17:32351912:+	IKZF3^ENSG00000161405.17	30917	chr17:39792933:-	ONLY_REF_SPLICE	YES	1086	451	0.00	0.01	GT	1.9656	AG	1.7465	0.0034	2175	0
UBE2Q2P1--GOLGA6L10	331	1	331.00	1.00	UBE2Q2P1^ENSG00000189136.9	13590	chr15:84526781:-	GOLGA6L10^ENSG00000278662.5	17775	chr15:82347629:-	ONLY_REF_SPLICE	YES	0	67	333.00	4.90	GT	1.8323	AG	1.7819	1.126	1203	0
UBE2Q2P1--GOLGA6L10	2	0	2.00	0.00	UBE2Q2P1^ENSG00000189136.9	10644	chr15:84538532:-	GOLGA6L10^ENSG00000278662.5	17775	chr15:82347629:-	ONLY_REF_SPLICE	YES	0	67	3.00	0.04	GT	1.6729	AG	1.7819	0.0068	2226	0
ANKRD13C--SSBP3	237	0	237.00	0.00	ANKRD13C^ENSG00000118454.13	4989	chr1:70315481:-	SSBP3^ENSG00000157216.16	38680	chr1:54243299:-	ONLY_REF_SPLICE	YES	321	743	0.74	0.32	GT	1.7465	AG	1.9329	0.8038	75	1
ANKRD13C--SSBP3	14	0	14.00	0.00	ANKRD13C^ENSG00000118454.13	3903	chr1:70324853:-	SSBP3^ENSG00000157216.16	38680	chr1:54243299:-	ONLY_REF_SPLICE	YES	321	743	0.05	0.02	GT	1.7056	AG	1.9329	0.0475	1053	0
ANKRD13C--SSBP3	8	0	8.00	0.00	ANKRD13C^ENSG00000118454.13	4989	chr1:70315481:-	SSBP3^ENSG00000157216.16	38656	chr1:54243323:-	ONLY_REF_SPLICE	YES	321	733	0.03	0.01	GT	1.7465	AG	1.9656	0.0271	98	1
ANKRD13C--SSBP3	3	0	3.00	0.00	ANKRD13C^ENSG00000118454.13	4989	chr1:70315481:-	SSBP3^ENSG00000157216.16	39767	chr1:54242212:-	ONLY_REF_SPLICE	YES	321	570	0.01	0.01	GT	1.7465	AG	1.4716	0.0102	1007	0
ANKRD13C--SSBP3	2	0	2.00	0.00	ANKRD13C^ENSG00000118454.13	2798	chr1:70336058:-	SSBP3^ENSG00000157216.16	38680	chr1:54243299:-	ONLY_REF_SPLICE	YES	232	743	0.01	0.00	GT	1.5301	AG	1.9329	0.0068	1717	0
ACACA--AATF	161	1	161.00	1.00	ACACA^ENSG00000278540.5	17242	chr17:37284838:-	AATF^ENSG00000275700.6	98964	chr17:37056601:+	ONLY_REF_SPLICE	YES	403	215	0.40	0.75	GT	1.5058	AG	1.9329	0.5494	1175	0
ACACA--AATF	56	0	56.00	0.00	ACACA^ENSG00000278540.5	12168	chr17:37330173:-	AATF^ENSG00000275700.6	98964	chr17:37056601:+	ONLY_REF_SPLICE	YES	339	215	0.17	0.26	GT	1.9899	AG	1.9329	0.1899	1133	0
TLK2--AC240565.1	157	0	157.00	0.00	TLK2^ENSG00000146872.18	17137	chr17:62560126:+	AC240565.1^ENSG00000280136.2	41242	chr17:106864:-	ONLY_REF_SPLICE	YES	553	43	0.29	3.59	GT	1.8892	AG	1.8892	0.5325	1734	0
TRPS1--RAD21	141	1	141.00	1.00	TRPS1^ENSG00000104447.13	13825	chr8:115587001:-	RAD21^ENSG00000164754.15	29554	chr8:116866761:-	ONLY_REF_SPLICE	YES	1818	987	0.08	0.14	GT	1.9329	AG	1.1033	0.4816	2735	0
ZNF444--MCM8	132	0	132.00	0.00	ZNF444^ENSG00000167685.15	6154	chr19:56146420:+	MCM8^ENSG00000125885.13	24340	chr20:5963274:+	ONLY_REF_SPLICE	YES	118	237	1.12	0.56	GT	1.5301	AG	1.5656	0.4477	2253	0
ZNF444--MCM8	1	0	1.00	0.00	ZNF444^ENSG00000167685.15	6154	chr19:56146420:+	MCM8^ENSG00000125885.13	25426	chr20:5967436:+	ONLY_REF_SPLICE	YES	118	290	0.02	0.01	GT	1.5301	AG	1.8892	0.0034	2599	0
ZNF444--MCM8	1	0	1.00	0.00	ZNF444^ENSG00000167685.15	2587	chr19:56141357:+	MCM8^ENSG00000125885.13	24340	chr20:5963274:+	ONLY_REF_SPLICE	YES	4	237	0.40	0.01	GT	1.7968	AG	1.5656	0.0034	4144	0
RIMS2--KDM2A	83	0	83.00	0.00	RIMS2^ENSG00000176406.23	6407	chr8:103766537:+	KDM2A^ENSG00000173120.15	62952	chr11:67180079:+	ONLY_REF_SPLICE	YES	374	741	0.22	0.11	GT	1.9656	AG	1.9656	0.2815	2282	0
RIMS2--KDM2A	5	0	5.00	0.00	RIMS2^ENSG00000176406.23	4084	chr8:103697296:+	KDM2A^ENSG00000173120.15	62952	chr11:67180079:+	ONLY_REF_SPLICE	YES	499	741	0.01	0.01	GT	1.8892	AG	1.9656	0.017	3167	0
CSMD3--TRPS1	80	0	80.00	0.00	CSMD3^ENSG00000164796.18	11576	chr8:113173722:-	TRPS1^ENSG00000104447.13	109876	chr8:115418452:-	ONLY_REF_SPLICE	YES	23	1421	3.38	0.06	GT	1.9219	AG	1.8892	0.2713	1804	0
CSMD3--TRPS1	1	0	1.00	0.00	CSMD3^ENSG00000164796.18	10381	chr8:113278592:-	TRPS1^ENSG00000104447.13	109876	chr8:115418452:-	ONLY_REF_SPLICE	YES	57	1421	0.03	0.00	GT	1.8062	AG	1.8892	0.0034	2229	0
NF1--SLC24A3	80	0	80.00	0.00	NF1^ENSG00000196712.18	9263	chr17:31182665:+	SLC24A3^ENSG00000185052.13	79403	chr20:19280959:+	ONLY_REF_SPLICE	YES	403	213	0.20	0.38	GT	1.6049	AG	1.9899	0.2713	803	0
NF1--SLC24A3	2	0	2.00	0.00	NF1^ENSG00000196712.18	1443	chr17:31095369:+	SLC24A3^ENSG00000185052.13	79403	chr20:19280959:+	ONLY_REF_SPLICE	YES	842	213	0.00	0.01	GT	1.9086	AG	1.9899	0.0068	8258	0
AP3S2--KLHL25	78	3	78.00	3.00	AP3S2^ENSG00000157823.17	4520	chr15:89888521:-	KLHL25^ENSG00000183655.13	24707	chr15:85769820:-	ONLY_REF_SPLICE	YES	714	74	0.11	1.09	GT	1.9656	AG	1.9219	0.2747	589	0
AP3S2--KLHL25	1	0	1.00	0.00	AP3S2^ENSG00000157823.17	1758	chr15:89893881:-	KLHL25^ENSG00000183655.13	24707	chr15:85769820:-	ONLY_REF_SPLICE	YES	520	74	0.00	0.03	GT	1.8323	AG	1.9219	0.0034	679	0
AP3S2--KLHL25	1	0	1.00	0.00	AP3S2^ENSG00000157823.17	3992	chr15:89889049:-	KLHL25^ENSG00000183655.13	24707	chr15:85769820:-	ONLY_REF_SPLICE	YES	500	74	0.00	0.03	GT	1.6729	AG	1.9219	0.0034	256	0
USP5--SPSB2	73	1	73.00	1.00	USP5^ENSG00000111667.14	5360	chr12:6858617:+	SPSB2^ENSG00000111671.10	23236	chr12:6871319:-	ONLY_REF_SPLICE	YES	395	290	0.19	0.26	GT	1.9656	AG	1.6729	0.251	1185	0
USP5--SPSB2	7	0	7.00	0.00	USP5^ENSG00000111667.14	4466	chr12:6857723:+	SPSB2^ENSG00000111671.10	23236	chr12:6871319:-	ONLY_REF_SPLICE	YES	267	290	0.03	0.03	GT	1.8323	AG	1.6729	0.0237	374	0
EXT1--TRPS1	72	0	72.00	0.00	EXT1^ENSG00000182197.12	2742	chr8:118110085:-	TRPS1^ENSG00000104447.13	31461	chr8:115620060:-	ONLY_REF_SPLICE	YES	212	2694	0.34	0.03	GT	1.8892	AG	1.8892	0.2442	2948	0
EXT1--TRPS1	5	0	5.00	0.00	EXT1^ENSG00000182197.12	2742	chr8:118110085:-	TRPS1^ENSG00000104447.13	33390	chr8:115605002:-	ONLY_REF_SPLICE	YES	212	3311	0.03	0.00	GT	1.8892	AG	1.8892	0.017	1021	0
EXT1--TRPS1	5	0	5.00	0.00	EXT1^ENSG00000182197.12	2742	chr8:118110085:-	TRPS1^ENSG00000104447.13	30293	chr8:115623758:-	ONLY_REF_SPLICE	YES	212	1960	0.03	0.00	GT	1.8892	AG	1.9656	0.017	3647	0
EXT1--TRPS1	1	0	1.00	0.00	EXT1^ENSG00000182197.12	2742	chr8:118110085:-	TRPS1^ENSG00000104447.13	24340	chr8:115701072:-	ONLY_REF_SPLICE	YES	212	0	0.01	2.00	GT	1.8892	AG	1.1033	0.0034	1408	0
EXT1--TRPS1	1	0	1.00	0.00	EXT1^ENSG00000182197.12	2742	chr8:118110085:-	TRPS1^ENSG00000104447.13	35520	chr8:115587604:-	ONLY_REF_SPLICE	YES	212	2261	0.01	0.00	GT	1.8892	AG	1.8256	0.0034	993	0
EIF3H--CSMD3	59	7	59.00	7.00	EIF3H^ENSG00000147677.11	13652	chr8:116655856:-	CSMD3^ENSG00000164796.18	32149	chr8:113278704:-	ONLY_REF_SPLICE	YES	3220	23	0.02	2.79	GT	1.8892	AG	1.9656	0.2238	2260	0
EIF3H--CSMD3	1	0	1.00	0.00	EIF3H^ENSG00000147677.11	13652	chr8:116655856:-	CSMD3^ENSG00000164796.18	33262	chr8:113173916:-	ONLY_REF_SPLICE	YES	3220	42	0.00	0.05	GT	1.8892	AG	1.9329	0.0034	1921	0
SNX1--SPTBN2	46	0	46.00	0.00	SNX1^ENSG00000028528.15	3516	chr15:64112684:+	SPTBN2^ENSG00000173898.14	30913	chr11:66721262:-	ONLY_REF_SPLICE	YES	812	87	0.06	0.53	GC	1.9656	AG	1.5656	0.156	1711	0
SNX1--SPTBN2	20	0	20.00	0.00	SNX1^ENSG00000028528.15	3520	chr15:64112688:+	SPTBN2^ENSG00000173898.14	28532	chr11:66729188:-	INCL_NON_REF_SPLICE	YES	809	0	0.03	21.00	GT	1.9656	AG	1.8892	0.0678	1639	0
SNX1--SPTBN2	9	0	9.00	0.00	SNX1^ENSG00000028528.15	3516	chr15:64112684:+	SPTBN2^ENSG00000173898.14	30735	chr11:66721440:-	ONLY_REF_SPLICE	YES	812	27	0.01	0.36	GC	1.9656	AG	1.8256	0.0305	1587	0
EXT1--AC103993.1	39	0	39.00	0.00	EXT1^ENSG00000182197.12	2742	chr8:118110085:-	AC103993.1^ENSG00000253207.3	25508	chr8:113616584:+	ONLY_REF_SPLICE	YES	212	0	0.19	40.00	GT	1.8892	AG	1.9899	0.1323	591	0
ELP4--RAB6A	32	0	32.00	0.00	ELP4^ENSG00000109911.19	5988	chr11:31539783:+	RAB6A^ENSG00000175582.20	58793	chr11:73720899:-	ONLY_REF_SPLICE	YES	174	940	0.19	0.04	GT	1.9329	AG	1.9656	0.1085	2526	0
SSBP3--ANKRD13C	26	0	26.00	0.00	SSBP3^ENSG00000157216.16	20695	chr1:54239129:-	ANKRD13C^ENSG00000118454.13	32668	chr1:70315566:-	ONLY_REF_SPLICE	YES	431	317	0.06	0.08	GT	1.7819	AG	1.8295	0.0882	3385	0
PGAP3--C2CD3	25	1	25.00	0.96	PGAP3^ENSG00000161395.14	4923	chr17:39684597:-	C2CD3^ENSG00000168014.18	17764	chr11:74161556:-	ONLY_REF_SPLICE	YES	487	283	0.06	0.10	GT	1.5656	AG	1.8323	0.0881	2483	0
PGAP3--C2CD3	22	0	22.00	0.00	PGAP3^ENSG00000161395.14	4923	chr17:39684597:-	C2CD3^ENSG00000168014.18	20290	chr11:74139828:-	ONLY_REF_SPLICE	YES	487	261	0.05	0.09	GT	1.5656	AG	1.7819	0.0746	2944	0
PGAP3--C2CD3	5	0	5.00	0.00	PGAP3^ENSG00000161395.14	2516	chr17:39687834:-	C2CD3^ENSG00000168014.18	24134	chr11:74133557:-	ONLY_REF_SPLICE	YES	430	296	0.01	0.02	GT	1.9656	AG	1.9656	0.017	709	0
PGAP3--C2CD3	2	0	2.00	0.00	PGAP3^ENSG00000161395.14	2516	chr17:39687834:-	C2CD3^ENSG00000168014.18	17764	chr11:74161556:-	ONLY_REF_SPLICE	YES	430	283	0.01	0.01	GT	1.9656	AG	1.8323	0.0068	2354	0
PGAP3--C2CD3	1	1	1.00	0.04	PGAP3^ENSG00000161395.14	4923	chr17:39684597:-	C2CD3^ENSG00000168014.18	16697	chr11:74164876:-	ONLY_REF_SPLICE	YES	487	254	0.01	0.01	GT	1.5656	AG	1.9656	0.0035	1647	0
SRSF11--FAM151A	24	0	24.00	0.00	SRSF11^ENSG00000116754.13	1099	chr1:70205780:+	FAM151A^ENSG00000162391.12	24704	chr1:54620007:-	ONLY_REF_SPLICE	YES	36	96	0.68	0.26	GT	1.5058	AG	1.7232	0.0814	1802	0
STAC2--CDS2	22	0	22.00	0.00	STAC2^ENSG00000141750.7	7133	chr17:39212995:-	CDS2^ENSG00000101290.14	15460	chr20:5173523:+	ONLY_REF_SPLICE	YES	921	1097	0.02	0.02	GT	1.8062	AG	1.8323	0.0746	1882	0
LRRC40--AL035412.1	18	0	18.00	0.00	LRRC40^ENSG00000066557.6	9261	chr1:70173465:-	AL035412.1^ENSG00000285041.1	20847	chr1:68634593:+	ONLY_REF_SPLICE	YES	208	0	0.09	19.00	GT	1.6402	AG	1.8892	0.061	1678	0
VRK2--ARHGAP23	16	0	16.00	0.00	VRK2^ENSG00000028116.18	19544	chr2:58135199:+	ARHGAP23^ENSG00000275832.5	53098	chr17:38509944:+	ONLY_REF_SPLICE	YES	528	125	0.03	0.13	GT	1.9656	AG	1.5219	0.0543	2741	0
NUDCD1--FAM83A	15	0	15.00	0.00	NUDCD1^ENSG00000120526.12	21274	chr8:109243151:-	FAM83A^ENSG00000147689.16	35013	chr8:123207157:+	INCL_NON_REF_SPLICE	YES	201	4	0.08	3.20	GC	1.4295	AG	1.7819	0.0509	1267	0
PPFIBP1--ARNTL2	15	0	15.00	0.00	PPFIBP1^ENSG00000110841.14	4200	chr12:27578239:+	ARNTL2^ENSG00000029153.14	48377	chr12:27380247:+	ONLY_REF_SPLICE	YES	352	258	0.05	0.06	GT	1.6895	AG	1.8892	0.0509	63	2
SIAH1--ABCC11	14	0	14.00	0.00	SIAH1^ENSG00000196470.12	9294	chr16:48385204:-	ABCC11^ENSG00000121270.16	40763	chr16:48198275:-	ONLY_REF_SPLICE	YES	139	104	0.11	0.14	GT	1.7232	AG	1.6402	0.0475	1909	0
EXT1--ABTB2	13	0	13.00	0.00	EXT1^ENSG00000182197.12	2742	chr8:118110085:-	ABTB2^ENSG00000166016.6	29041	chr11:34173307:-	ONLY_REF_SPLICE	YES	212	83	0.07	0.17	GT	1.8892	AG	1.7819	0.0441	1382	0
HAT1--CAVIN2-AS1	10	0	10.00	0.00	HAT1^ENSG00000128708.13	4194	chr2:171925641:+	CAVIN2-AS1^ENSG00000233766.7	27332	chr2:192034694:+	ONLY_REF_SPLICE	YES	303	0	0.04	11.00	GT	1.6895	AG	1.7819	0.0339	1366	0
HAT1--CAVIN2-AS1	3	0	3.00	0.00	HAT1^ENSG00000128708.13	4194	chr2:171925641:+	CAVIN2-AS1^ENSG00000233766.7	24275	chr2:192030582:+	ONLY_REF_SPLICE	YES	303	0	0.01	4.00	GT	1.6895	AG	1.9329	0.0102	1006	0
AC012291.3--CD276	3	0	3.00	0.00	AC012291.3^ENSG00000285667.1	2630	chr15:84745208:-	CD276^ENSG00000103855.18	12176	chr15:73702255:+	ONLY_REF_SPLICE	YES	0	497	4.00	0.01	GT	1.7465	AG	1.8323	0.0102	374	0
MAL2--AC064802.1	1	0	1.00	0.00	MAL2^ENSG00000147676.14	5557	chr8:119221757:+	AC064802.1^ENSG00000254339.5	16789	chr8:114295466:+	ONLY_REF_SPLICE	YES	1591	0	0.00	2.00	GT	1.9899	AG	1.7819	0.0034	2666	0