Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads 3,aih-tih-sc-d113b5-R1_B23WHYVLT4_1,TAACTTGGTC-GTCGTGAATC,39218874,38564803,654071,0,0.0098,0.9833,0.0167,0.0000 3,aih-tih-sc-60f9b9-R1_B23WHYVLT4_1,ATAAGCGGAG-CTGTTCTACG,16153852,15578217,575635,0,0.0040,0.9644,0.0356,0.0000 3,aih-tih-sc-6e7384-R1_B23WHYVLT4_1,AGTAGTGTTG-AACACCTCTT,52592754,51718600,874154,0,0.0131,0.9834,0.0166,0.0000 3,aih-tih-sc-ea2fad-R1_B23WHYVLT4_1,ATGTTGCCAC-TAGAAGCCAT,23366135,22961533,404602,0,0.0058,0.9827,0.0173,0.0000 3,aih-tih-sc-0a6b7b-R1_B23WHYVLT4_1,CAGCAGGTCA-CACTTAGGTA,63029718,62196414,833304,0,0.0157,0.9868,0.0132,0.0000 3,aih-tih-sc-934f55-R1_B23WHYVLT4_1,TCTAGCTGCG-ATAGGTAAGG,45406077,44675708,730369,0,0.0113,0.9839,0.0161,0.0000 3,aih-tih-sc-c7b68f-R1_B23WHYVLT4_1,AGATTAGCGT-CGCCTTATAT,40306428,39310171,996257,0,0.0100,0.9753,0.0247,0.0000 3,aih-tih-sc-13a2f6-R1_B23WHYVLT4_1,AGGTAACAAC-GCACGATGCT,13291180,13084309,206871,0,0.0033,0.9844,0.0156,0.0000 3,aih-tih-sc-97c26d-R1_B23WHYVLT4_1,CGCACTTCGT-AATATGCCAG,14117424,13903615,213809,0,0.0035,0.9849,0.0151,0.0000 3,aih-tih-sc-9114fc-R1_B23WHYVLT4_1,CTTGCTATTC-TAGAGTCACG,56411108,55416326,994782,0,0.0140,0.9824,0.0176,0.0000 3,aih-tih-sc-446670-R1_B23WHYVLT4_1,TCTCACCAGG-TTAACAGGTC,27941543,27323234,618309,0,0.0069,0.9779,0.0221,0.0000 3,aih-tih-sc-e9e54b-R1_B23WHYVLT4_1,TTCCTCACGT-ACATGAGCCA,36962640,36376341,586299,0,0.0092,0.9841,0.0159,0.0000 3,aih-tih-sc-0fc41c-R1_B23WHYVLT4_1,TCGAACACGA-GCGAGGTTCT,28562150,28115731,446419,0,0.0071,0.9844,0.0156,0.0000 3,aih-tih-sc-79f487-R1_B23WHYVLT4_1,TCCAACTGAA-TGTCCGTAGG,34134800,33517863,616937,0,0.0085,0.9819,0.0181,0.0000 3,aih-tih-sc-63b0e7-R1_B23WHYVLT4_1,GAACCGCATT-CATTATGCCT,40007362,39417080,590282,0,0.0099,0.9852,0.0148,0.0000 3,aih-tih-sc-d12f1f-R1_B23WHYVLT4_1,ACAACAGGCT-TCCACTGTTG,61064897,60196364,868533,0,0.0152,0.9858,0.0142,0.0000 3,aih-tih-sc-18a6f2-R1_B23WHYVLT4_1,TTACGCGCAT-CTTAACGACA,24671166,24314739,356427,0,0.0061,0.9856,0.0144,0.0000 3,aih-tih-sc-4f4d6e-R1_B23WHYVLT4_1,TTCTCTTAGC-TCCTCGAGCT,27075305,26616530,458775,0,0.0067,0.9831,0.0169,0.0000 3,aih-tih-sc-51ee59-R1_B23WHYVLT4_1,TCGCGACACT-CGAGTAATGT,47439305,46717183,722122,0,0.0118,0.9848,0.0152,0.0000 3,aih-tih-sc-4dcd88-R1_B23WHYVLT4_1,TGGAGATCGA-CAGCGGTATG,46904817,45620213,1284604,0,0.0117,0.9726,0.0274,0.0000 3,aih-tih-sc-d2f1f4-R1_B23WHYVLT4_1,CCAGACCGAT-GCTACTTGCA,27923033,27398747,524286,0,0.0069,0.9812,0.0188,0.0000 3,aih-tih-sc-445ab1-R1_B23WHYVLT4_1,CCACAGCCTT-GCTATTGAAG,41798943,41065694,733249,0,0.0104,0.9825,0.0175,0.0000 3,aih-tih-sc-762402-R1_B23WHYVLT4_1,ACCGAATAGA-TCAGCATCCG,26624695,26161912,462783,0,0.0066,0.9826,0.0174,0.0000 3,aih-tih-sc-758b5a-R1_B23WHYVLT4_1,CGGACGATTC-TAGGTGGTGG,54945498,54202061,743437,0,0.0137,0.9865,0.0135,0.0000 3,aih-tih-sc-c04072-R1_B23WHYVLT4_1,TTACTTCGTG-AAGATCGGAT,39013593,38410046,603547,0,0.0097,0.9845,0.0155,0.0000 3,aih-tih-sc-8a623b-R1_B23WHYVLT4_1,ATTCGGCTTA-TTAACGTCCG,39265277,38699052,566225,0,0.0098,0.9856,0.0144,0.0000 3,aih-tih-sc-76a805-R1_B23WHYVLT4_1,CGCGGTATCT-ATTACCGATC,63927860,63010943,916917,0,0.0159,0.9857,0.0143,0.0000 3,aih-tih-sc-63c8b4-R1_B23WHYVLT4_1,TATCCGCGTC-GTTGCATCGT,36740414,36102134,638280,0,0.0091,0.9826,0.0174,0.0000 3,aih-tih-sc-8b4971-R1_B23WHYVLT4_1,AGGATGTCCA-ACTGGACGTT,36178001,35551297,626704,0,0.0090,0.9827,0.0173,0.0000 3,aih-tih-sc-be4b28-R1_B23WHYVLT4_1,GCCAGCTATC-TTGTTCGTGT,28654449,28208624,445825,0,0.0071,0.9844,0.0156,0.0000 3,aih-tih-sc-89cc59-R1_B23WHYVLT4_1,CTTACGAACT-ACGGACTGAG,22754381,22362900,391481,0,0.0057,0.9828,0.0172,0.0000 3,aih-tih-sc-910896-R1_B23WHYVLT4_1,CAAGACTCAA-CACCGTCATA,30415095,29869412,545683,0,0.0076,0.9821,0.0179,0.0000 3,aih-tih-sc-7c6c07-R1_B23WHYVLT4_1,TCGACGGCAA-GTAGTTGTGT,45195892,44521804,674088,0,0.0112,0.9851,0.0149,0.0000 3,aih-tih-sc-505123-R1_B23WHYVLT4_1,TCAGTTCGAT-CTGAGTCCTT,17043194,16765881,277313,0,0.0042,0.9837,0.0163,0.0000 3,aih-tih-sc-b93682-R1_B23WHYVLT4_1,CTAACCTCAA-TCACAGTTGC,53819875,52950509,869366,0,0.0134,0.9838,0.0162,0.0000 3,aih-tih-sc-16054b-R1_B23WHYVLT4_1,GACCTACTAT-ATTGTAAGCG,46157977,45423237,734740,0,0.0115,0.9841,0.0159,0.0000 3,aih-tih-sc-1d89ab-R1_B23WHYVLT4_1,ACGAGACGTC-CGGTCTCTCT,39165893,38497460,668433,0,0.0097,0.9829,0.0171,0.0000 3,aih-tih-sc-62dadb-R1_B23WHYVLT4_1,TATGGCAAGC-AACAGCAATG,11436385,11242383,194002,0,0.0028,0.9830,0.0170,0.0000 3,aih-tih-sc-c55577-R1_B23WHYVLT4_1,ACTCCGAAGC-TCCGTGTTGC,24710077,24356249,353828,0,0.0061,0.9857,0.0143,0.0000 3,aih-tih-sc-3376ed-R1_B23WHYVLT4_1,AATCTGCAGT-TGCGAAGTGA,48646489,47995524,650965,0,0.0121,0.9866,0.0134,0.0000 3,aih-tih-sc-7d62c4-R1_B23WHYVLT4_1,AGTTCAGGCG-CACAGCTATT,48041170,47285376,755794,0,0.0119,0.9843,0.0157,0.0000 3,aih-tih-sc-6473fb-R1_B23WHYVLT4_1,CGCCAAGGTA-GATAGTGTTC,29775956,29241812,534144,0,0.0074,0.9821,0.0179,0.0000 3,aih-tih-sc-6284ec-R1_B23WHYVLT4_1,CCTGACATCT-TAGCTACCAG,34773634,33852439,921195,0,0.0086,0.9735,0.0265,0.0000 3,aih-tih-sc-b157e9-R1_B23WHYVLT4_1,CGAGCGTAGT-TGCTCACGCA,49076099,48383754,692345,0,0.0122,0.9859,0.0141,0.0000 3,aih-tih-sc-51d534-R1_B23WHYVLT4_1,CTGGATTACT-AAGTGTGCTA,34323758,33864327,459431,0,0.0085,0.9866,0.0134,0.0000 3,aih-tih-sc-3e91d2-R1_B23WHYVLT4_1,AGCAATTCAC-TCATCGTCTG,51802147,51028599,773548,0,0.0129,0.9851,0.0149,0.0000 3,aih-tih-sc-f39d87-R1_B23WHYVLT4_1,ATATTCTCGG-AGATGCTCCG,29112464,28542412,570052,0,0.0072,0.9804,0.0196,0.0000 3,aih-tih-sc-3924cb-R1_B23WHYVLT4_1,GACTCATCCA-GAACCAAGCG,38884752,38252093,632659,0,0.0097,0.9837,0.0163,0.0000 3,aih-tih-sc-1d9134-R1_B23WHYVLT4_1,CATAAGCGAC-CCTCTTCAAG,29933371,29387092,546279,0,0.0074,0.9818,0.0182,0.0000 3,aih-tih-sc-c63171-R1_B23WHYVLT4_1,CCTAAGCTGA-CGTCGCATCT,41835985,41127168,708817,0,0.0104,0.9831,0.0169,0.0000 3,aih-tih-sc-ce6733-R1_B23WHYVLT4_1,CGATGTCTTG-CCGAACGTTC,64958945,63956240,1002705,0,0.0162,0.9846,0.0154,0.0000 3,aih-tih-sc-176637-R1_B23WHYVLT4_1,GAGATGAGAG-GAATGGCGTT,23987724,23393504,594220,0,0.0060,0.9752,0.0248,0.0000 3,aih-tih-sc-a3a521-R1_B23WHYVLT4_1,TCACCATAAG-AAGTTCAGGA,37056818,36434695,622123,0,0.0092,0.9832,0.0168,0.0000 3,aih-tih-sc-099ac4-R1_B23WHYVLT4_1,ACTTCCGGCA-GACCAATTGT,56596164,55825719,770445,0,0.0141,0.9864,0.0136,0.0000 3,aih-tih-sc-5ef3cb-R1_B23WHYVLT4_1,AAGCGCTTAG-TGTCTGTGAC,34833133,34120806,712327,0,0.0087,0.9796,0.0204,0.0000 3,aih-tih-sc-75c3a9-R1_B23WHYVLT4_1,AACAACACAG-GAACATTGGC,57135085,56184626,950459,0,0.0142,0.9834,0.0166,0.0000 3,NTC_0001_0001_B23WHYVLT4_1,AGACTAGATG-CGTAACACTA,122419,120153,2266,0,0.0000,0.9815,0.0185,0.0000 3,aih-tih-sc-7dd1d5-R1_B23WHYVLT4_1,CCTCTATAGA-GTACTTCCAA,26557919,26007753,550166,0,0.0066,0.9793,0.0207,0.0000 3,aih-tih-sc-72546a-R1_B23WHYVLT4_1,TACGCTACTT-TTAGCGTCTT,43279196,42581003,698193,0,0.0108,0.9839,0.0161,0.0000 3,aih-tih-sc-7c610c-R1_B23WHYVLT4_1,CGCACTGGTA-TTGACCGTCT,71513486,70465659,1047827,0,0.0178,0.9853,0.0147,0.0000 3,aih-tih-sc-8d3f7c-R1_B23WHYVLT4_1,AACTCTCTAC-ACGGCTTCTC,25668378,25090643,577735,0,0.0064,0.9775,0.0225,0.0000 3,aih-tih-sc-8b9375-R1_B23WHYVLT4_1,GCCACCTAGT-TGCGATGTAT,49218968,48169064,1049904,0,0.0122,0.9787,0.0213,0.0000 3,aih-tih-sc-97ecde-R1_B23WHYVLT4_1,CTCCGCCATA-GCGTTCAGCA,31715937,31191813,524124,0,0.0079,0.9835,0.0165,0.0000 3,aih-tih-sc-3b3c1e-R1_B23WHYVLT4_1,TGACACGATT-GCCTAGGAAG,39128326,38452839,675487,0,0.0097,0.9827,0.0173,0.0000 3,aih-tih-sc-20b7e4-R1_B23WHYVLT4_1,CAACTGCGCA-AGTGTATCCG,14072824,13788010,284814,0,0.0035,0.9798,0.0202,0.0000 3,aih-tih-sc-b845f7-R1_B23WHYVLT4_1,GCAATCTGCT-ACGAACCAAG,35475045,34859953,615092,0,0.0088,0.9827,0.0173,0.0000 3,aih-tih-sc-7fc50e-R1_B23WHYVLT4_1,CTCTATTGAG-CACGCAAGTC,22840623,22140572,700051,0,0.0057,0.9694,0.0306,0.0000 3,aih-tih-sc-a03f86-R1_B23WHYVLT4_1,CACTTACGGC-GCTGGAGAAG,19865147,19545499,319648,0,0.0049,0.9839,0.0161,0.0000 3,aih-tih-sc-03bdd8-R1_B23WHYVLT4_1,TCAGCATCTA-CCAGTGTACG,71158393,70041467,1116926,0,0.0177,0.9843,0.0157,0.0000 3,aih-tih-sc-4cd8a8-R1_B23WHYVLT4_1,GTTGCATCAA-GTTGATGCGA,25865096,25500007,365089,0,0.0064,0.9859,0.0141,0.0000 3,aih-tih-sc-0183f6-R1_B23WHYVLT4_1,ATGACAGCAC-CGCTTGTTAT,27356814,26797614,559200,0,0.0068,0.9796,0.0204,0.0000 3,FFPE_HD789_01_RNA_13_B23WHYVLT4_1,TAGCGACGGA-GTAACGTTCA,49869263,48917998,951265,0,0.0124,0.9809,0.0191,0.0000 3,aih-tih-sc-f14fdc-R1_B23WHYVLT4_1,GTATGCCACA-CCGAGTCTTC,54430183,53565807,864376,0,0.0135,0.9841,0.0159,0.0000 3,aih-tih-sc-027d27-R1_B23WHYVLT4_1,AGTATCCGAT-TATTGCGCTA,32952734,32116167,836567,0,0.0082,0.9746,0.0254,0.0000 3,aih-tih-sc-1ba302-R1_B23WHYVLT4_1,AACGAAGATC-TGTGGTCTAA,51273366,50381581,891785,0,0.0127,0.9826,0.0174,0.0000 3,aih-tih-sc-973c73-R1_B23WHYVLT4_1,CCTCCTGTGA-CACGTCTACG,55789287,54403932,1385355,0,0.0139,0.9752,0.0248,0.0000 3,aih-tih-sc-a70f1e-R1_B23WHYVLT4_1,TAGGCGAATG-AGTCCAGTGA,31267209,30790970,476239,0,0.0078,0.9848,0.0152,0.0000 3,aih-tih-sc-7c8bae-R1_B23WHYVLT4_1,AGTAAGGAGA-ATGCTTGGTC,38724454,38141669,582785,0,0.0096,0.9850,0.0150,0.0000 3,aih-tih-sc-37dd87-R1_B23WHYVLT4_1,CCGAACAGAG-TGATACTCGC,38706182,37900461,805721,0,0.0096,0.9792,0.0208,0.0000 3,aih-tih-sc-f71b32-R1_B23WHYVLT4_1,AGAACTAACG-TTATCGAGAG,39131510,38537013,594497,0,0.0097,0.9848,0.0152,0.0000 3,FFPE_V4_0002_RNA_0001_B23WHYVLT4_1,GAGCAGCTTG-TGCCAGTATT,64760228,63504330,1255898,0,0.0161,0.9806,0.0194,0.0000 3,aih-tih-sc-f4e5c4-R1_B23WHYVLT4_1,CCGATAGTAG-GAGTTGCATA,21330718,20732050,598668,0,0.0053,0.9719,0.0281,0.0000 3,aih-tih-sc-c9a01b-R1_B23WHYVLT4_1,GTGTCTACAG-ACACTAGCAT,58461119,57551893,909226,0,0.0145,0.9844,0.0156,0.0000 3,aih-tih-sc-a49d10-R1_B23WHYVLT4_1,GTACAGACCG-GTTCTAATGG,59122226,58140735,981491,0,0.0147,0.9834,0.0166,0.0000 3,aih-tih-sc-82e8c1-R1_B23WHYVLT4_1,GCCAACAGAC-CGTTCACGTT,35556057,34970266,585791,0,0.0088,0.9835,0.0165,0.0000 3,aih-tih-sc-5c902f-R1_B23WHYVLT4_1,CCTCGTTGGA-GACTGCGTTA,28231101,27686770,544331,0,0.0070,0.9807,0.0193,0.0000 3,aih-tih-sc-ac6a71-R1_B23WHYVLT4_1,AATAGGTAGG-TGGCTTATGG,41392692,40793702,598990,0,0.0103,0.9855,0.0145,0.0000 3,aih-tih-sc-070e1d-R1_B23WHYVLT4_1,TATGCGTAGC-TCAGAGGCAC,35077867,34537170,540697,0,0.0087,0.9846,0.0154,0.0000 3,aih-tih-sc-c5cb90-R1_B23WHYVLT4_1,CCAGTCGTCA-CGCTAGGCTA,63970173,62908882,1061291,0,0.0159,0.9834,0.0166,0.0000 3,aih-tih-sc-976eb1-R1_B23WHYVLT4_1,AGAAGACCTA-AACCGTAACA,9286404,9072053,214351,0,0.0023,0.9769,0.0231,0.0000 3,aih-tih-sc-ea6ef3-R1_B23WHYVLT4_1,CCGTGAGTTC-CTTGGTATGA,55801421,54920308,881113,0,0.0139,0.9842,0.0158,0.0000 3,aih-tih-sc-d5506e-R1_B23WHYVLT4_1,TCAATTCCGA-TGTAGATCCG,32219378,31778738,440640,0,0.0080,0.9863,0.0137,0.0000 3,aih-tih-sc-884b4c-R1_B23WHYVLT4_1,CGGAACACAA-AACTCTACCG,54608267,53486533,1121734,0,0.0136,0.9795,0.0205,0.0000 3,aih-tih-sc-2f84cc-R1_B23WHYVLT4_1,CTATAACGGA-CGTGACATTC,15461757,15200990,260767,0,0.0038,0.9831,0.0169,0.0000 3,aih-tih-sc-522d83-R1_B23WHYVLT4_1,AGATGTAAGG-CTGTACCAGG,39649112,39040054,609058,0,0.0099,0.9846,0.0154,0.0000 3,aih-tih-sc-2a5468-R1_B23WHYVLT4_1,ATGCTTACTG-ACTGGTTCCG,65131474,64126113,1005361,0,0.0162,0.9846,0.0154,0.0000 3,Undetermined,,310603780,310603780,0,0,0.0772,1.0000,0.0000,0.0000