#==================================================
#All numbers are READ count
#==================================================

Total records:                          479474707

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        38100595
Unmapped reads:                         3746549
mapq < mapq_cut (non-unique):           15570331

mapq >= mapq_cut (unique):              422057232
Read-1:                                 211152099
Read-2:                                 210905133
Reads map to '+':                       211069731
Reads map to '-':                       210987501
Non-splice reads:                       252905494
Splice reads:                           169151738
Reads mapped in proper pairs:           420816174
Proper-paired reads map to different chrom:0