#==================================================
#All numbers are READ count
#==================================================

Total records:                          569347704

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        48143968
Unmapped reads:                         3662294
mapq < mapq_cut (non-unique):           20178800

mapq >= mapq_cut (unique):              497362642
Read-1:                                 248840376
Read-2:                                 248522266
Reads map to '+':                       248719982
Reads map to '-':                       248642660
Non-splice reads:                       281500650
Splice reads:                           215861992
Reads mapped in proper pairs:           495791916
Proper-paired reads map to different chrom:0