AIH curated blacklist: matched 9 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 227
Pass (FILTER=PASS): 22 (9.7%)
Fail (FILTER=FAIL): 205 (90.3%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 9
All 9 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 43
confidence_below_min(low<high): 36
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 21
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 16
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 16
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 16
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 3
aih_curated_blacklist: 2
total_reads_below_min(3.0<8.0): 2
Breakdown by confidence:
high: 22 pass, 6 fail (total: 28)
low: 0 pass, 101 fail (total: 101)
medium: 0 pass, 98 fail (total: 98)
Arriba filter: 227 rows -> 22 PASS; wrote aih-tih-sc-51d534-R1_B23WHYVLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-51d534-R1_B23WHYVLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-51d534-R1_B23WHYVLT4_1.arriba.fusions.filter_summary.txt