Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/695e50952c85a79afd8575d7d63cd1/aih-tih-sc-7c8bae-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/3a85cf5fd7dcab82f67ce614f5f683/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/3a85cf5fd7dcab82f67ce614f5f683/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory