Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/01/2c755ade3f7ac89baf85609ca0a6d3/aih-tih-sc-60f9b9-R1_B23WHYVLT4_1.arriba.fusions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-8900cb43-4dca-49ac-a290-1d176a2e0012/bb/b9dd0d6df869a3d0edd9f161adc899/dummy_file_fusioncatcher.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1c/ad7dfff3ae4dd41ef7da1984a17333/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/25/86306b639d837358bd65d6a3bb5217/aih-tih-sc-60f9b9-R1_B23WHYVLT4_1.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1c/ad7dfff3ae4dd41ef7da1984a17333/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
==> STAGING COMPLETE (6 inputs)

Running application...
TLK2P1--AC110079.1
starfusion
SSH2--NF1
starfusion
arriba
TLK2--AC240565.1
starfusion
IGF1R--PHF24
starfusion
COL1A1--SLC45A4
starfusion
MELK--RGS3
starfusion
arriba
CSDE1--STRIP1
starfusion
PRSS27--TPSB2
starfusion
CD58--TNFRSF14-AS1
arriba
TVP23C--CDRT4
arriba
ZCCHC4--AC079772.1
arriba
ZCCHC4--AC016687.3
arriba

  0%|          | 0/12 [00:00<?, ?it/s]
Processing TLK2P1--AC110079.1:   0%|          | 0/12 [00:00<?, ?it/s]
Processing TLK2P1--AC110079.1:   8%|▊         | 1/12 [00:00<00:01,  9.12it/s]
Processing SSH2--NF1:   8%|▊         | 1/12 [00:00<00:01,  9.12it/s]         
Processing SSH2--NF1:  17%|█▋        | 2/12 [00:00<00:01,  9.34it/s]
Processing TLK2--AC240565.1:  17%|█▋        | 2/12 [00:00<00:01,  9.34it/s]
Processing TLK2--AC240565.1:  25%|██▌       | 3/12 [00:00<00:00,  9.41it/s]
Processing IGF1R--PHF24:  25%|██▌       | 3/12 [00:00<00:00,  9.41it/s]    
Processing IGF1R--PHF24:  33%|███▎      | 4/12 [00:00<00:00,  9.44it/s]
Processing COL1A1--SLC45A4:  33%|███▎      | 4/12 [00:00<00:00,  9.44it/s]
Processing COL1A1--SLC45A4:  42%|████▏     | 5/12 [00:00<00:00,  9.47it/s]
Processing MELK--RGS3:  42%|████▏     | 5/12 [00:00<00:00,  9.47it/s]     
Processing MELK--RGS3:  50%|█████     | 6/12 [00:00<00:00,  9.49it/s]
Processing CSDE1--STRIP1:  50%|█████     | 6/12 [00:00<00:00,  9.49it/s]
Processing CSDE1--STRIP1:  58%|█████▊    | 7/12 [00:00<00:00,  9.49it/s]
Processing PRSS27--TPSB2:  58%|█████▊    | 7/12 [00:00<00:00,  9.49it/s]
Processing PRSS27--TPSB2:  67%|██████▋   | 8/12 [00:00<00:00,  9.50it/s]
Processing CD58--TNFRSF14-AS1:  67%|██████▋   | 8/12 [00:00<00:00,  9.50it/s]
Processing CD58--TNFRSF14-AS1:  75%|███████▌  | 9/12 [00:00<00:00,  9.51it/s]
Processing TVP23C--CDRT4:  75%|███████▌  | 9/12 [00:00<00:00,  9.51it/s]     
Processing TVP23C--CDRT4:  83%|████████▎ | 10/12 [00:01<00:00,  9.52it/s]
Processing ZCCHC4--AC079772.1:  83%|████████▎ | 10/12 [00:01<00:00,  9.52it/s]
Processing ZCCHC4--AC079772.1:  92%|█████████▏| 11/12 [00:01<00:00,  9.53it/s]
Processing ZCCHC4--AC016687.3:  92%|█████████▏| 11/12 [00:01<00:00,  9.53it/s]
Processing ZCCHC4--AC016687.3: 100%|██████████| 12/12 [00:01<00:00,  9.53it/s]
Processing ZCCHC4--AC016687.3: 100%|██████████| 12/12 [00:01<00:00,  9.48it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory