Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/47/e6294b8774ea05e3e6ae5a4078afb2/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/47/e6294b8774ea05e3e6ae5a4078afb2/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/92e9f16edf8e7410c0f5bb5e2369bf/aih-tih-sc-18a6f2-R1_B23WHYVLT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2e/925ab04a23aa08751077bc1578874f/aih-tih-sc-18a6f2-R1_B23WHYVLT4_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-18a6f2-R1_B23WHYVLT4_1/abundance.h5
Successfully converted aih-tih-sc-18a6f2-R1_B23WHYVLT4_1/abundance.h5 to aih-tih-sc-18a6f2-R1_B23WHYVLT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-18a6f2-R1_B23WHYVLT4_1
  Mean Fragment Length: 116.9 bp
  Median Fragment Length: 110.0 bp
  pct_mito_est_counts: 0.035%
  pct_ribo_est_counts: 0.984%
  pct_hk_est_counts: 0.478%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.076%
  pct_ribo_tpm: 3.189%
  pct_hk_tpm: 0.771%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.009%