File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/65ace7b70aa616265cca9db65bdeca/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/65ace7b70aa616265cca9db65bdeca/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/58aa6113e4eb369f0fb86234870a5b/aih-tih-sc-027d27-R1_B23WHYVLT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/65ace7b70aa616265cca9db65bdeca/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ac/21fda8e11c2aa7a260f122b319a8e8/aih-tih-sc-027d27-R1_B23WHYVLT4_1
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-027d27-R1_B23WHYVLT4_1/abundance.h5
Successfully converted aih-tih-sc-027d27-R1_B23WHYVLT4_1/abundance.h5 to aih-tih-sc-027d27-R1_B23WHYVLT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-027d27-R1_B23WHYVLT4_1
  Mean Fragment Length: 131.1 bp
  Median Fragment Length: 122.0 bp
  pct_mito_est_counts: 0.018%
  pct_ribo_est_counts: 1.272%
  pct_hk_est_counts: 0.449%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.038%
  pct_ribo_tpm: 3.695%
  pct_hk_tpm: 0.673%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.015%