File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/88/1ef15b33790b2bda52e94cd53e154e/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/74/21533d7b5006186af8048f6a887561/aih-tih-sc-2a5468-R1_B23WHYVLT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/88/1ef15b33790b2bda52e94cd53e154e/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/88/1ef15b33790b2bda52e94cd53e154e/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/90/6b33455949830bd4e27f1fa4bd010f/aih-tih-sc-2a5468-R1_B23WHYVLT4_1
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-2a5468-R1_B23WHYVLT4_1/abundance.h5
Successfully converted aih-tih-sc-2a5468-R1_B23WHYVLT4_1/abundance.h5 to aih-tih-sc-2a5468-R1_B23WHYVLT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-2a5468-R1_B23WHYVLT4_1
  Mean Fragment Length: 141.3 bp
  Median Fragment Length: 129.0 bp
  pct_mito_est_counts: 0.039%
  pct_ribo_est_counts: 1.28%
  pct_hk_est_counts: 0.559%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.088%
  pct_ribo_tpm: 3.789%
  pct_hk_tpm: 0.85%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.007%