Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e1/2c77fb572c184f163ab5315543f5c7/aih-tih-sc-c9a01b-R1_B23WHYVLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/de/d2f55e43a99dc061d3c268e82f9461/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/de/d2f55e43a99dc061d3c268e82f9461/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory