Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-8900cb43-4dca-49ac-a290-1d176a2e0012/bb/b9dd0d6df869a3d0edd9f161adc899/dummy_file_fusioncatcher.txt
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/77/3c2d2a21e472e5580f8b3fd8eff130/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b4/955504dd03a6ec37a48f3668ed675f/aih-tih-sc-7dd1d5-R1_B23WHYVLT4_1.arriba.fusions.filtered_pass_only.tsv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/77/3c2d2a21e472e5580f8b3fd8eff130/.command.run
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/72/97fc83e68de4ec1e879567290e9d93/aih-tih-sc-7dd1d5-R1_B23WHYVLT4_1.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
==> STAGING COMPLETE (6 inputs)
[32mRunning application...[0m
PRSS27--TPSB2
starfusion
TLK2P1--AC110079.1
starfusion
FMNL2--PDXK
starfusion
TVP23C--CDRT4
arriba
GAS6-AS1--TMEM255B
arriba
0%| | 0/5 [00:00<?, ?it/s]
Processing PRSS27--TPSB2: 0%| | 0/5 [00:00<?, ?it/s]
Processing PRSS27--TPSB2: 20%|██ | 1/5 [00:00<00:00, 9.08it/s]
Processing TLK2P1--AC110079.1: 20%|██ | 1/5 [00:00<00:00, 9.08it/s]
Processing TLK2P1--AC110079.1: 40%|████ | 2/5 [00:00<00:00, 9.37it/s]
Processing FMNL2--PDXK: 40%|████ | 2/5 [00:00<00:00, 9.37it/s]
Processing FMNL2--PDXK: 60%|██████ | 3/5 [00:00<00:00, 9.46it/s]
Processing TVP23C--CDRT4: 60%|██████ | 3/5 [00:00<00:00, 9.46it/s]
Processing TVP23C--CDRT4: 80%|████████ | 4/5 [00:00<00:00, 9.49it/s]
Processing GAS6-AS1--TMEM255B: 80%|████████ | 4/5 [00:00<00:00, 9.49it/s]
Processing GAS6-AS1--TMEM255B: 100%|██████████| 5/5 [00:00<00:00, 9.52it/s]
Processing GAS6-AS1--TMEM255B: 100%|██████████| 5/5 [00:00<00:00, 9.46it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory