AIH curated blacklist: matched 11 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 314
Pass (FILTER=PASS): 14 (4.5%)
Fail (FILTER=FAIL): 300 (95.5%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 11
All 11 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 106
confidence_below_min(low<high): 39
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 38
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 23
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 22
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(low<high);aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 3
total_reads_below_min(5.0<8.0): 3
Breakdown by confidence:
high: 14 pass, 6 fail (total: 20)
low: 0 pass, 152 fail (total: 152)
medium: 0 pass, 142 fail (total: 142)
Arriba filter: 314 rows -> 14 PASS; wrote aih-tih-sc-4dcd88-R1_B23WHYVLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-4dcd88-R1_B23WHYVLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-4dcd88-R1_B23WHYVLT4_1.arriba.fusions.filter_summary.txt