File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/421f9a22d43edee1fef162935d96de/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/81/0d6b4f04f35bcb66633d995c48509f/aih-tih-sc-3924cb-R1_B23WHYVLT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/421f9a22d43edee1fef162935d96de/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2b/8e1ec5bc82ed1ab107112c79dcd225/aih-tih-sc-3924cb-R1_B23WHYVLT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/421f9a22d43edee1fef162935d96de/.command.run
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-3924cb-R1_B23WHYVLT4_1/abundance.h5
Successfully converted aih-tih-sc-3924cb-R1_B23WHYVLT4_1/abundance.h5 to aih-tih-sc-3924cb-R1_B23WHYVLT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-3924cb-R1_B23WHYVLT4_1
  Mean Fragment Length: 138.9 bp
  Median Fragment Length: 128.0 bp
  pct_mito_est_counts: 0.027%
  pct_ribo_est_counts: 0.719%
  pct_hk_est_counts: 0.504%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.057%
  pct_ribo_tpm: 2.238%
  pct_hk_tpm: 0.725%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.009%