Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c3/3f8bc392b51d3ec6e7e2013d886d69/aih-tih-sc-6e7384-R1_B23WHYVLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/bd14968647e1ef8f74c3ab31fe1e87/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/bd14968647e1ef8f74c3ab31fe1e87/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory