File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ba/ab4c15f498779a6e940fd284a93443/.command.err
Size
79.9 KB
Attempt
-ctat genome lib [/tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.LjY1tSeUAO/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary
-sample contains 183890561 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir  -J /tmp/nxf.LjY1tSeUAO/aih-tih-sc-ea2fad-R1_B23WHYVLT4_1.Chimeric.out.junction  -O /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.LjY1tSeUAO/aih-tih-sc-ea2fad-R1_B23WHYVLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[1570000], rate=64609.05/min -building interval tree based on /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[1570000], rate=64344.26/min -building interval tree based on /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[1540000], rate=56896.55/min 
[1550000], rate=56915.54/min 
[1560000], rate=56899.70/min 
[1570000], rate=56884.06/min -building interval tree based on /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=120000.00/min 
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[30000], rate=138461.54/min 
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[100000], rate=133333.33/min 
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[640000], rate=54314.00/min 
[650000], rate=54545.45/min 
[660000], rate=54771.78/min 
[670000], rate=54993.16/min 
[680000], rate=55284.55/min 
[690000], rate=55645.16/min 
[700000], rate=56074.77/min 
[710000], rate=56052.63/min 
[720000], rate=55886.16/min 
[730000], rate=55867.35/min 
[740000], rate=55919.40/min 
[750000], rate=55900.62/min 
[760000], rate=55813.95/min 
[770000], rate=55932.20/min 
[780000], rate=55913.98/min 
[790000], rate=56028.37/min 
[800000], rate=55944.06/min 
[810000], rate=56055.36/min 
[820000], rate=56164.38/min 
[830000], rate=56334.84/min 
[840000], rate=56438.97/min 
[850000], rate=56541.02/min 
[860000], rate=56703.30/min 
[870000], rate=56924.75/min 
[880000], rate=57204.77/min 
[890000], rate=57419.35/min 
[900000], rate=57692.31/min 
[910000], rate=57961.78/min 
[920000], rate=57922.35/min 
[930000], rate=57525.77/min 
[940000], rate=57200.81/min 
[950000], rate=56943.06/min 
[960000], rate=56304.99/min 
[970000], rate=56123.43/min 
[980000], rate=55893.54/min 
[990000], rate=55722.33/min 
[1000000], rate=55504.16/min 
[1010000], rate=55443.73/min 
[1020000], rate=55384.62/min 
[1030000], rate=55277.28/min 
[1040000], rate=55221.24/min 
[1050000], rate=55166.37/min 
[1060000], rate=55160.45/min 
[1070000], rate=55202.06/min 
[1080000], rate=55242.97/min 
[1090000], rate=55189.87/min 
[1100000], rate=55183.95/min 
[1110000], rate=55178.13/min 
[1120000], rate=55217.75/min 
[1130000], rate=55256.72/min 
[1140000], rate=55295.07/min 
[1150000], rate=55377.21/min 
[1160000], rate=55458.17/min 
[1170000], rate=55625.99/min 
[1180000], rate=55791.96/min 
[1190000], rate=55956.11/min 
[1200000], rate=56118.47/min 
[1210000], rate=56279.07/min 
[1220000], rate=56437.93/min 
[1230000], rate=56508.42/min 
[1240000], rate=56193.35/min 
[1250000], rate=55803.57/min 
[1260000], rate=55506.61/min 
[1270000], rate=55377.91/min 
[1280000], rate=54896.35/min 
[1290000], rate=54661.02/min 
[1300000], rate=54507.34/min 
[1310000], rate=54356.85/min 
[1320000], rate=54283.76/min 
[1330000], rate=54211.96/min 
[1340000], rate=54177.90/min 
[1350000], rate=54108.22/min 
[1360000], rate=54075.55/min 
[1370000], rate=54114.55/min 
[1380000], rate=54153.04/min 
[1390000], rate=54296.88/min 
[1400000], rate=54368.93/min 
[1410000], rate=54475.21/min 
[1420000], rate=54545.45/min 
[1430000], rate=54684.51/min 
[1440000], rate=54787.57/min 
[1450000], rate=54924.24/min 
[1460000], rate=55059.71/min 
[1470000], rate=55193.99/min 
[1480000], rate=55361.60/min 
[1490000], rate=55562.46/min 
[1500000], rate=55727.55/min 
[1510000], rate=55856.97/min 
[1520000], rate=55916.62/min 
[1530000], rate=55873.40/min 
[1540000], rate=55864.57/min 
[1550000], rate=55855.86/min 
[1560000], rate=55913.98/min 
[1570000], rate=56004.76/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 4800000.00 reads per min processed...  
 5000000.00 reads per min processed...  
 4500000.00 reads per min processed...  
 4666666.67 reads per min processed...  
 4363636.36 reads per min processed...  
 4500000.00 reads per min processed...  
 4615384.62 reads per min processed...  
 4400000.00 reads per min processed...  
 4500000.00 reads per min processed...  
 4333333.33 reads per min processed...  
 4421052.63 reads per min processed...  
 4285714.29 reads per min processed...  
 4173913.04 reads per min processed...  
 4250000.00 reads per min processed...  
 4153846.15 reads per min processed...  
 4222222.22 reads per min processed...  
 4137931.03 reads per min processed...  
 4200000.00 reads per min processed...  
 4258064.52 reads per min processed...  
 4181818.18 reads per min processed...  
 4235294.12 reads per min processed...  
 4285714.29 reads per min processed...  
 4333333.33 reads per min processed...  
 4263157.89 reads per min processed...  
 4307692.31 reads per min processed...  
 4350000.00 reads per min processed...  
 4390243.90 reads per min processed...  
 4428571.43 reads per min processed...  
 4571428.57 reads per min processed...  
 4500000.00 reads per min processed...  
 4533333.33 reads per min processed...  
 4468085.11 reads per min processed...  
 4500000.00 reads per min processed...  
 4530612.24 reads per min processed...  
 4470588.24 reads per min processed...  
 4500000.00 reads per min processed...  
 4528301.89 reads per min processed...  
 4472727.27 reads per min processed...  
 4500000.00 reads per min processed...  
 4526315.79 reads per min processed...  
 4551724.14 reads per min processed...  
 4500000.00 reads per min processed...  
 4524590.16 reads per min processed...  
 4476190.48 reads per min processed...  
 4500000.00 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.LjY1tSeUAO/aih-tih-sc-ea2fad-R1_B23WHYVLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -283532.617955
EM: Round [1] log likelihood: -283410.675268
EM: Round [2] log likelihood: -283367.591475
EM: Round [3] log likelihood: -283347.740727
EM: Round [4] log likelihood: -283337.328223
EM: Round [5] log likelihood: -283331.390641
EM: Round [6] log likelihood: -283327.767594
EM: Round [7] log likelihood: -283325.422000
EM: Round [8] log likelihood: -283323.823897
EM: Round [9] log likelihood: -283322.686725
EM: Round [10] log likelihood: -283321.846837
EM: Round [11] log likelihood: -283321.206141
EM: Round [12] log likelihood: -283320.703407
EM: Round [13] log likelihood: -283320.299097
EM: Round [14] log likelihood: -283319.966912
EM: Round [15] log likelihood: -283319.688891
EM: Round [16] log likelihood: -283319.452455
EM: Round [17] log likelihood: -283319.248598
EM: Round [18] log likelihood: -283319.070733
EM: Round [19] log likelihood: -283318.913952
EM: Round [20] log likelihood: -283318.774531
EM: Round [21] log likelihood: -283318.649601
EM: Round [22] log likelihood: -283318.536916
EM: Round [23] log likelihood: -283318.434697
EM: Round [24] log likelihood: -283318.341511
EM: Round [25] log likelihood: -283318.256197
EM: Round [26] log likelihood: -283318.177795
EM: Round [27] log likelihood: -283318.105510
EM: Round [28] log likelihood: -283318.038672
EM: Round [29] log likelihood: -283317.976715
EM: Round [30] log likelihood: -283317.919154
EM: Round [31] log likelihood: -283317.865568
EM: Round [32] log likelihood: -283317.815595
EM: Round [33] log likelihood: -283317.768917
EM: Round [34] log likelihood: -283317.725251
EM: Round [35] log likelihood: -283317.684350
EM: Round [36] log likelihood: -283317.645992
EM: Round [37] log likelihood: -283317.609979
EM: Round [38] log likelihood: -283317.576133
EM: Round [39] log likelihood: -283317.544293
EM: Round [40] log likelihood: -283317.514312
EM: Round [41] log likelihood: -283317.486059
EM: Round [42] log likelihood: -283317.459412
EM: Round [43] log likelihood: -283317.434262
EM: Round [44] log likelihood: -283317.410506
EM: Round [45] log likelihood: -283317.388053
EM: Round [46] log likelihood: -283317.366816
EM: Round [47] log likelihood: -283317.346716
EM: Round [48] log likelihood: -283317.327682
EM: Round [49] log likelihood: -283317.309645
EM: Round [50] log likelihood: -283317.292544
EM: Round [51] log likelihood: -283317.276320
EM: Round [52] log likelihood: -283317.260921
EM: Round [53] log likelihood: -283317.246295
EM: Round [54] log likelihood: -283317.232397
EM: Round [55] log likelihood: -283317.219184
EM: Round [56] log likelihood: -283317.206616
EM: Round [57] log likelihood: -283317.194655
EM: Round [58] log likelihood: -283317.183265
EM: Round [59] log likelihood: -283317.172416
EM: Round [60] log likelihood: -283317.162075
EM: Round [61] log likelihood: -283317.152215
EM: Round [62] log likelihood: -283317.142809
EM: Round [63] log likelihood: -283317.133831
EM: Round [64] log likelihood: -283317.125259
EM: Round [65] log likelihood: -283317.117070
EM: Round [66] log likelihood: -283317.109244
EM: Round [67] log likelihood: -283317.101762
EM: Round [68] log likelihood: -283317.094605
EM: Round [69] log likelihood: -283317.087756
EM: Round [70] log likelihood: -283317.081201
EM: Round [71] log likelihood: -283317.074922
EM: Round [72] log likelihood: -283317.068907
EM: Round [73] log likelihood: -283317.063142
EM: Round [74] log likelihood: -283317.057614
EM: Round [75] log likelihood: -283317.052312
EM: Round [76] log likelihood: -283317.047225
EM: Round [77] log likelihood: -283317.042342
EM: Round [78] log likelihood: -283317.037653
EM: Round [79] log likelihood: -283317.033150
EM: Round [80] log likelihood: -283317.028822
EM: Round [81] log likelihood: -283317.024662
EM: Round [82] log likelihood: -283317.020663
EM: Round [83] log likelihood: -283317.016816
EM: Round [84] log likelihood: -283317.013114
EM: Round [85] log likelihood: -283317.009552
EM: Round [86] log likelihood: -283317.006122
EM: Round [87] log likelihood: -283317.002819
EM: Round [88] log likelihood: -283316.999638
EM: Round [89] log likelihood: -283316.996572
EM: Round [90] log likelihood: -283316.993617
EM: Round [91] log likelihood: -283316.990768
EM: Round [92] log likelihood: -283316.988021
EM: Round [93] log likelihood: -283316.985371
EM: Round [94] log likelihood: -283316.982814
EM: Round [95] log likelihood: -283316.980346
EM: Round [96] log likelihood: -283316.977964
EM: Round [97] log likelihood: -283316.975663
EM: Round [98] log likelihood: -283316.973442
EM: Round [99] log likelihood: -283316.971296
EM: Round [100] log likelihood: -283316.969222
EM: Round [101] log likelihood: -283316.967218
EM: Round [102] log likelihood: -283316.965281
EM: Round [103] log likelihood: -283316.963408
EM: Round [104] log likelihood: -283316.961597
EM: Round [105] log likelihood: -283316.959845
EM: Round [106] log likelihood: -283316.958151
EM: Round [107] log likelihood: -283316.956511
EM: Round [108] log likelihood: -283316.954924
EM: Round [109] log likelihood: -283316.953388
EM: Round [110] log likelihood: -283316.951902
EM: Round [111] log likelihood: -283316.950462
EM: Round [112] log likelihood: -283316.949068
EM: Round [113] log likelihood: -283316.947717
EM: Round [114] log likelihood: -283316.946409
EM: Round [115] log likelihood: -283316.945142
EM: Round [116] log likelihood: -283316.943914
EM: Round [117] log likelihood: -283316.942724
EM: Round [118] log likelihood: -283316.941571
EM: Round [119] log likelihood: -283316.940452
EM: Round [120] log likelihood: -283316.939368
EM: Round [121] log likelihood: -283316.938317
EM: Round [122] log likelihood: -283316.937298
EM: Round [123] log likelihood: -283316.936309
EM: Round [124] log likelihood: -283316.935350
EM: Round [125] log likelihood: -283316.934419
EM: Round [126] log likelihood: -283316.933517
EM: Round [127] log likelihood: -283316.932641
EM: Round [128] log likelihood: -283316.931791
EM: Round [129] log likelihood: -283316.930966
EM: Round [130] log likelihood: -283316.930165
EM: Round [131] log likelihood: -283316.929388
EM: Round [132] log likelihood: -283316.928633
EM: Round [133] log likelihood: -283316.927900
EM: Round [134] log likelihood: -283316.927189
EM: Round [135] log likelihood: -283316.926498
EM: Round [136] log likelihood: -283316.925827
EM: Round [137] log likelihood: -283316.925175
EM: Round [138] log likelihood: -283316.924542
EM: Round [139] log likelihood: -283316.923927
EM: Round [140] log likelihood: -283316.923329
EM: Round [141] log likelihood: -283316.922748
EM: Round [142] log likelihood: -283316.922184
EM: Round [143] log likelihood: -283316.921636
EM: Round [144] log likelihood: -283316.921103
EM: Round [145] log likelihood: -283316.920585
EM: Round [146] log likelihood: -283316.920082
EM: Round [147] log likelihood: -283316.919592
EM: Round [148] log likelihood: -283316.919117
EM: Round [149] log likelihood: -283316.918654
EM: Round [150] log likelihood: -283316.918204
EM: Round [151] log likelihood: -283316.917767
EM: Round [152] log likelihood: -283316.917342
EM: Round [153] log likelihood: -283316.916928
EM: Round [154] log likelihood: -283316.916526
EM: Round [155] log likelihood: -283316.916135
EM: Round [156] log likelihood: -283316.915754
EM: Round [157] log likelihood: -283316.915384
EM: Round [158] log likelihood: -283316.915024
EM: Round [159] log likelihood: -283316.914674
EM: Round [160] log likelihood: -283316.914333
EM: Round [161] log likelihood: -283316.914001
EM: Round [162] log likelihood: -283316.913678
EM: Round [163] log likelihood: -283316.913364
EM: Round [164] log likelihood: -283316.913058
EM: Round [165] log likelihood: -283316.912761
EM: Round [166] log likelihood: -283316.912471
EM: Round [167] log likelihood: -283316.912189
EM: Round [168] log likelihood: -283316.911915
EM: Round [169] log likelihood: -283316.911648
EM: Round [170] log likelihood: -283316.911387
EM: Round [171] log likelihood: -283316.911134
EM: Round [172] log likelihood: -283316.910888
EM: Round [173] log likelihood: -283316.910647
EM: Round [174] log likelihood: -283316.910413
EM: Round [175] log likelihood: -283316.910186
EM: Round [176] log likelihood: -283316.909964
EM: Round [177] log likelihood: -283316.909748
EM: Round [178] log likelihood: -283316.909537
EM: Round [179] log likelihood: -283316.909332
EM: Round [180] log likelihood: -283316.909132
EM: Round [181] log likelihood: -283316.908938
EM: Round [182] log likelihood: -283316.908748
EM: Round [183] log likelihood: -283316.908563
EM: Round [184] log likelihood: -283316.908383
EM: Round [185] log likelihood: -283316.908208
EM: Round [186] log likelihood: -283316.908036
EM: Round [187] log likelihood: -283316.907870
EM: Round [188] log likelihood: -283316.907707
EM: Round [189] log likelihood: -283316.907549
EM: Round [190] log likelihood: -283316.907394
EM: Round [191] log likelihood: -283316.907244
EM: Round [192] log likelihood: -283316.907097
EM: Round [193] log likelihood: -283316.906954
EM: Round [194] log likelihood: -283316.906814
EM: Round [195] log likelihood: -283316.906678
EM: Round [196] log likelihood: -283316.906545
EM: Round [197] log likelihood: -283316.906416
EM: Round [198] log likelihood: -283316.906289
EM: Round [199] log likelihood: -283316.906166
EM: Round [200] log likelihood: -283316.906046
EM: Round [201] log likelihood: -283316.905928
EM: Round [202] log likelihood: -283316.905814
EM: Round [203] log likelihood: -283316.905702
EM: Round [204] log likelihood: -283316.905593
EM: Round [205] log likelihood: -283316.905487
EM: Round [206] log likelihood: -283316.905383
EM: Round [207] log likelihood: -283316.905281
EM: Round [208] log likelihood: -283316.905183
EM: Stopping iterations at round 208 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -282985.049501
EM: Round [1] log likelihood: -282884.879746
EM: Round [2] log likelihood: -282850.148996
EM: Round [3] log likelihood: -282834.250652
EM: Round [4] log likelihood: -282825.935238
EM: Round [5] log likelihood: -282821.200615
EM: Round [6] log likelihood: -282818.311096
EM: Round [7] log likelihood: -282816.436127
EM: Round [8] log likelihood: -282815.153135
EM: Round [9] log likelihood: -282814.234556
EM: Round [10] log likelihood: -282813.550807
EM: Round [11] log likelihood: -282813.024366
EM: Round [12] log likelihood: -282812.606932
EM: Round [13] log likelihood: -282812.267384
EM: Round [14] log likelihood: -282811.985074
EM: Round [15] log likelihood: -282811.745936
EM: Round [16] log likelihood: -282811.540141
EM: Round [17] log likelihood: -282811.360665
EM: Round [18] log likelihood: -282811.202371
EM: Round [19] log likelihood: -282811.061430
EM: Round [20] log likelihood: -282810.934931
EM: Round [21] log likelihood: -282810.820622
EM: Round [22] log likelihood: -282810.716731
EM: Round [23] log likelihood: -282810.621845
EM: Round [24] log likelihood: -282810.534817
EM: Round [25] log likelihood: -282810.454710
EM: Round [26] log likelihood: -282810.380740
EM: Round [27] log likelihood: -282810.312251
EM: Round [28] log likelihood: -282810.248686
EM: Round [29] log likelihood: -282810.189566
EM: Round [30] log likelihood: -282810.134478
EM: Round [31] log likelihood: -282810.083061
EM: Round [32] log likelihood: -282810.034999
EM: Round [33] log likelihood: -282809.990011
EM: Round [34] log likelihood: -282809.947848
EM: Round [35] log likelihood: -282809.908289
EM: Round [36] log likelihood: -282809.871133
EM: Round [37] log likelihood: -282809.836200
EM: Round [38] log likelihood: -282809.803327
EM: Round [39] log likelihood: -282809.772367
EM: Round [40] log likelihood: -282809.743185
EM: Round [41] log likelihood: -282809.715656
EM: Round [42] log likelihood: -282809.689669
EM: Round [43] log likelihood: -282809.665121
EM: Round [44] log likelihood: -282809.641915
EM: Round [45] log likelihood: -282809.619964
EM: Round [46] log likelihood: -282809.599188
EM: Round [47] log likelihood: -282809.579511
EM: Round [48] log likelihood: -282809.560865
EM: Round [49] log likelihood: -282809.543185
EM: Round [50] log likelihood: -282809.526411
EM: Round [51] log likelihood: -282809.510490
EM: Round [52] log likelihood: -282809.495368
EM: Round [53] log likelihood: -282809.480999
EM: Round [54] log likelihood: -282809.467338
EM: Round [55] log likelihood: -282809.454344
EM: Round [56] log likelihood: -282809.441977
EM: Round [57] log likelihood: -282809.430202
EM: Round [58] log likelihood: -282809.418985
EM: Round [59] log likelihood: -282809.408295
EM: Round [60] log likelihood: -282809.398101
EM: Round [61] log likelihood: -282809.388377
EM: Round [62] log likelihood: -282809.379097
EM: Round [63] log likelihood: -282809.370236
EM: Round [64] log likelihood: -282809.361772
EM: Round [65] log likelihood: -282809.353683
EM: Round [66] log likelihood: -282809.345950
EM: Round [67] log likelihood: -282809.338554
EM: Round [68] log likelihood: -282809.331476
EM: Round [69] log likelihood: -282809.324702
EM: Round [70] log likelihood: -282809.318214
EM: Round [71] log likelihood: -282809.311999
EM: Round [72] log likelihood: -282809.306043
EM: Round [73] log likelihood: -282809.300332
EM: Round [74] log likelihood: -282809.294855
EM: Round [75] log likelihood: -282809.289600
EM: Round [76] log likelihood: -282809.284556
EM: Round [77] log likelihood: -282809.279713
EM: Round [78] log likelihood: -282809.275062
EM: Round [79] log likelihood: -282809.270593
EM: Round [80] log likelihood: -282809.266297
EM: Round [81] log likelihood: -282809.262167
EM: Round [82] log likelihood: -282809.258195
EM: Round [83] log likelihood: -282809.254374
EM: Round [84] log likelihood: -282809.250696
EM: Round [85] log likelihood: -282809.247156
EM: Round [86] log likelihood: -282809.243747
EM: Round [87] log likelihood: -282809.240463
EM: Round [88] log likelihood: -282809.237300
EM: Round [89] log likelihood: -282809.234250
EM: Round [90] log likelihood: -282809.231311
EM: Round [91] log likelihood: -282809.228476
EM: Round [92] log likelihood: -282809.225742
EM: Round [93] log likelihood: -282809.223104
EM: Round [94] log likelihood: -282809.220558
EM: Round [95] log likelihood: -282809.218101
EM: Round [96] log likelihood: -282809.215728
EM: Round [97] log likelihood: -282809.213437
EM: Round [98] log likelihood: -282809.211224
EM: Round [99] log likelihood: -282809.209086
EM: Round [100] log likelihood: -282809.207019
EM: Round [101] log likelihood: -282809.205022
EM: Round [102] log likelihood: -282809.203091
EM: Round [103] log likelihood: -282809.201224
EM: Round [104] log likelihood: -282809.199418
EM: Round [105] log likelihood: -282809.197672
EM: Round [106] log likelihood: -282809.195982
EM: Round [107] log likelihood: -282809.194346
EM: Round [108] log likelihood: -282809.192764
EM: Round [109] log likelihood: -282809.191231
EM: Round [110] log likelihood: -282809.189748
EM: Round [111] log likelihood: -282809.188312
EM: Round [112] log likelihood: -282809.186921
EM: Round [113] log likelihood: -282809.185573
EM: Round [114] log likelihood: -282809.184268
EM: Round [115] log likelihood: -282809.183003
EM: Round [116] log likelihood: -282809.181777
EM: Round [117] log likelihood: -282809.180589
EM: Round [118] log likelihood: -282809.179437
EM: Round [119] log likelihood: -282809.178321
EM: Round [120] log likelihood: -282809.177238
EM: Round [121] log likelihood: -282809.176189
EM: Round [122] log likelihood: -282809.175171
EM: Round [123] log likelihood: -282809.174183
EM: Round [124] log likelihood: -282809.173226
EM: Round [125] log likelihood: -282809.172296
EM: Round [126] log likelihood: -282809.171395
EM: Round [127] log likelihood: -282809.170520
EM: Round [128] log likelihood: -282809.169671
EM: Round [129] log likelihood: -282809.168846
EM: Round [130] log likelihood: -282809.168046
EM: Round [131] log likelihood: -282809.167270
EM: Round [132] log likelihood: -282809.166516
EM: Round [133] log likelihood: -282809.165784
EM: Round [134] log likelihood: -282809.165073
EM: Round [135] log likelihood: -282809.164382
EM: Round [136] log likelihood: -282809.163712
EM: Round [137] log likelihood: -282809.163061
EM: Round [138] log likelihood: -282809.162428
EM: Round [139] log likelihood: -282809.161813
EM: Round [140] log likelihood: -282809.161216
EM: Round [141] log likelihood: -282809.160636
EM: Round [142] log likelihood: -282809.160072
EM: Round [143] log likelihood: -282809.159524
EM: Round [144] log likelihood: -282809.158991
EM: Round [145] log likelihood: -282809.158474
EM: Round [146] log likelihood: -282809.157970
EM: Round [147] log likelihood: -282809.157481
EM: Round [148] log likelihood: -282809.157006
EM: Round [149] log likelihood: -282809.156543
EM: Round [150] log likelihood: -282809.156094
EM: Round [151] log likelihood: -282809.155657
EM: Round [152] log likelihood: -282809.155232
EM: Round [153] log likelihood: -282809.154818
EM: Round [154] log likelihood: -282809.154416
EM: Round [155] log likelihood: -282809.154025
EM: Round [156] log likelihood: -282809.153645
EM: Round [157] log likelihood: -282809.153275
EM: Round [158] log likelihood: -282809.152915
EM: Round [159] log likelihood: -282809.152564
EM: Round [160] log likelihood: -282809.152224
EM: Round [161] log likelihood: -282809.151892
EM: Round [162] log likelihood: -282809.151569
EM: Round [163] log likelihood: -282809.151255
EM: Round [164] log likelihood: -282809.150950
EM: Round [165] log likelihood: -282809.150652
EM: Round [166] log likelihood: -282809.150363
EM: Round [167] log likelihood: -282809.150081
EM: Round [168] log likelihood: -282809.149806
EM: Round [169] log likelihood: -282809.149539
EM: Round [170] log likelihood: -282809.149279
EM: Round [171] log likelihood: -282809.149026
EM: Round [172] log likelihood: -282809.148779
EM: Round [173] log likelihood: -282809.148539
EM: Round [174] log likelihood: -282809.148305
EM: Round [175] log likelihood: -282809.148078
EM: Round [176] log likelihood: -282809.147856
EM: Round [177] log likelihood: -282809.147640
EM: Round [178] log likelihood: -282809.147429
EM: Round [179] log likelihood: -282809.147224
EM: Round [180] log likelihood: -282809.147024
EM: Round [181] log likelihood: -282809.146830
EM: Round [182] log likelihood: -282809.146640
EM: Round [183] log likelihood: -282809.146455
EM: Round [184] log likelihood: -282809.146275
EM: Round [185] log likelihood: -282809.146100
EM: Round [186] log likelihood: -282809.145929
EM: Round [187] log likelihood: -282809.145762
EM: Round [188] log likelihood: -282809.145599
EM: Round [189] log likelihood: -282809.145441
EM: Round [190] log likelihood: -282809.145287
EM: Round [191] log likelihood: -282809.145136
EM: Round [192] log likelihood: -282809.144989
EM: Round [193] log likelihood: -282809.144846
EM: Round [194] log likelihood: -282809.144706
EM: Round [195] log likelihood: -282809.144570
EM: Round [196] log likelihood: -282809.144437
EM: Round [197] log likelihood: -282809.144308
EM: Round [198] log likelihood: -282809.144182
EM: Round [199] log likelihood: -282809.144058
EM: Round [200] log likelihood: -282809.143938
EM: Round [201] log likelihood: -282809.143821
EM: Round [202] log likelihood: -282809.143706
EM: Round [203] log likelihood: -282809.143595
EM: Round [204] log likelihood: -282809.143486
EM: Round [205] log likelihood: -282809.143379
EM: Round [206] log likelihood: -282809.143275
EM: Round [207] log likelihood: -282809.143174
EM: Round [208] log likelihood: -282809.143075
EM: Stopping iterations at round 208 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 183890561 > /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir > /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir --annotate /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir
-done, see /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2167, filtered: 11790)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000259345.7]
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WARNING, no entry stored in dbm for [IGL.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000236107.10]
WARNING, no entry stored in dbm for [ENSG00000272281.6]
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WARNING, no entry stored in dbm for [ENSG00000234711.1]
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WARNING, no entry stored in dbm for [ENSG00000205231.1]
WARNING, no entry stored in dbm for [ENSG00000258384.1]
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WARNING, no entry stored in dbm for [ENSG00000201641.1]
WARNING, no entry stored in dbm for [ENSG00000226149.6]
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WARNING, no entry stored in dbm for [ENSG00000215506.5]
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WARNING, no entry stored in dbm for [ENSG00000258427.3]
WARNING, no entry stored in dbm for [ENSG00000241350.1]
WARNING, no entry stored in dbm for [ENSG00000281357.3]
WARNING, no entry stored in dbm for [ENSG00000229502.5]
WARNING, no entry stored in dbm for [ENSG00000269386.5]
WARNING, no entry stored in dbm for [ENSG00000251273.4]
WARNING, no entry stored in dbm for [ENSG00000251143.1]
WARNING, no entry stored in dbm for [ENSG00000249859.12]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000287660.1]
WARNING, no entry stored in dbm for [ENSG00000257771.6]
WARNING, no entry stored in dbm for [ENSG00000249312.1]
WARNING, no entry stored in dbm for [ENSG00000236671.9]
WARNING, no entry stored in dbm for [ENSG00000279080.1]
WARNING, no entry stored in dbm for [ENSG00000266179.2]
WARNING, no entry stored in dbm for [ENSG00000249456.1]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [ENSG00000226633.2]
WARNING, no entry stored in dbm for [ENSG00000237424.1]
WARNING, no entry stored in dbm for [ENSG00000237468.2]
WARNING, no entry stored in dbm for [ENSG00000279924.1]
WARNING, no entry stored in dbm for [ENSG00000284630.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000274602.5]
WARNING, no entry stored in dbm for [ENSG00000201223.1]
WARNING, no entry stored in dbm for [ENSG00000224204.1]
WARNING, no entry stored in dbm for [ENSG00000177410.13]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000152931.9]
WARNING, no entry stored in dbm for [ENSG00000214106.9]
WARNING, no entry stored in dbm for [ENSG00000254658.3]
WARNING, no entry stored in dbm for [ENSG00000241472.7]
WARNING, no entry stored in dbm for [ENSG00000280119.1]
WARNING, no entry stored in dbm for [ENSG00000244491.1]
WARNING, no entry stored in dbm for [ENSG00000280291.1]
WARNING, no entry stored in dbm for [ENSG00000219085.1]
WARNING, no entry stored in dbm for [ENSG00000242070.1]
WARNING, no entry stored in dbm for [ENSG00000266916.7]
WARNING, no entry stored in dbm for [ENSG00000225391.5]
WARNING, no entry stored in dbm for [ENSG00000235978.6]
WARNING, no entry stored in dbm for [ENSG00000249541.1]
WARNING, no entry stored in dbm for [ENSG00000254051.1]
WARNING, no entry stored in dbm for [ENSG00000135502.19]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000207089.1]
WARNING, no entry stored in dbm for [ENSG00000202229.1]
WARNING, no entry stored in dbm for [ENSG00000271408.1]
WARNING, no entry stored in dbm for [ENSG00000276735.1]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000105988.6]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000251141.6]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000125462.19]
WARNING, no entry stored in dbm for [ENSG00000233006.8]
WARNING, no entry stored in dbm for [ENSG00000224184.6]
WARNING, no entry stored in dbm for [ENSG00000266325.1]
WARNING, no entry stored in dbm for [ENSG00000266325.1]
WARNING, no entry stored in dbm for [ENSG00000266325.1]
WARNING, no entry stored in dbm for [ENSG00000227288.3]
WARNING, no entry stored in dbm for [ENSG00000257444.1]
WARNING, no entry stored in dbm for [ENSG00000271237.1]
WARNING, no entry stored in dbm for [ENSG00000251842.1]
WARNING, no entry stored in dbm for [ENSG00000201852.1]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000257759.2]
WARNING, no entry stored in dbm for [ENSG00000242326.1]
WARNING, no entry stored in dbm for [ENSG00000215424.10]
WARNING, no entry stored in dbm for [ENSG00000215424.10]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000283692.2]
WARNING, no entry stored in dbm for [ENSG00000255248.9]
WARNING, no entry stored in dbm for [ENSG00000234222.6]
WARNING, no entry stored in dbm for [ENSG00000274372.5]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000241288.8]
WARNING, no entry stored in dbm for [ENSG00000250754.6]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000238042.5]
WARNING, no entry stored in dbm for [ENSG00000281903.2]
WARNING, no entry stored in dbm for [ENSG00000248461.3]
WARNING, no entry stored in dbm for [ENSG00000224153.3]
WARNING, no entry stored in dbm for [ENSG00000243832.1]
WARNING, no entry stored in dbm for [ENSG00000280721.1]
WARNING, no entry stored in dbm for [ENSG00000226983.3]
WARNING, no entry stored in dbm for [ENSG00000279579.3]
WARNING, no entry stored in dbm for [ENSG00000218357.3]
WARNING, no entry stored in dbm for [ENSG00000168746.8]
WARNING, no entry stored in dbm for [ENSG00000233158.1]
WARNING, no entry stored in dbm for [ENSG00000234766.2]
WARNING, no entry stored in dbm for [ENSG00000234380.2]
WARNING, no entry stored in dbm for [ENSG00000218426.5]
WARNING, no entry stored in dbm for [ENSG00000215866.8]
WARNING, no entry stored in dbm for [ENSG00000223715.3]
WARNING, no entry stored in dbm for [ENSG00000224577.3]
WARNING, no entry stored in dbm for [ENSG00000212694.8]
WARNING, no entry stored in dbm for [ENSG00000224559.2]
WARNING, no entry stored in dbm for [ENSG00000282508.2]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000241769.7]
WARNING, no entry stored in dbm for [ENSG00000228221.6]
WARNING, no entry stored in dbm for [ENSG00000233559.2]
WARNING, no entry stored in dbm for [ENSG00000248360.7]
WARNING, no entry stored in dbm for [ENSG00000238121.6]
WARNING, no entry stored in dbm for [ENSG00000223768.2]
WARNING, no entry stored in dbm for [ENSG00000203930.12]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000257844.2]
WARNING, no entry stored in dbm for [ENSG00000287090.1]
WARNING, no entry stored in dbm for [ENSG00000245694.10]
WARNING, no entry stored in dbm for [ENSG00000261824.7]
WARNING, no entry stored in dbm for [ENSG00000258944.1]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000225733.6]
WARNING, no entry stored in dbm for [ENSG00000179428.2]
WARNING, no entry stored in dbm for [ENSG00000261737.1]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000217041.1]
WARNING, no entry stored in dbm for [ENSG00000236373.2]
WARNING, no entry stored in dbm for [ENSG00000125631.7]
WARNING, no entry stored in dbm for [ENSG00000227000.2]
WARNING, no entry stored in dbm for [ENSG00000259722.2]
WARNING, no entry stored in dbm for [ENSG00000237398.1]
WARNING, no entry stored in dbm for [ENSG00000234500.1]
WARNING, no entry stored in dbm for [ENSG00000280254.1]
WARNING, no entry stored in dbm for [ENSG00000246090.7]
WARNING, no entry stored in dbm for [ENSG00000230596.3]
WARNING, no entry stored in dbm for [ENSG00000228393.4]
WARNING, no entry stored in dbm for [ENSG00000260776.6]
WARNING, no entry stored in dbm for [ENSG00000242797.3]
WARNING, no entry stored in dbm for [ENSG00000283095.1]
WARNING, no entry stored in dbm for [ENSG00000218227.3]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000269692.1]
WARNING, no entry stored in dbm for [ENSG00000160172.10]
WARNING, no entry stored in dbm for [ENSG00000232300.1]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000260565.7]
WARNING, no entry stored in dbm for [ENSG00000225774.2]
WARNING, no entry stored in dbm for [ENSG00000231648.2]
WARNING, no entry stored in dbm for [ENSG00000188828.13]
WARNING, no entry stored in dbm for [ENSG00000241769.7]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000265545.1]
WARNING, no entry stored in dbm for [ENSG00000279145.2]
WARNING, no entry stored in dbm for [ENSG00000232656.9]
WARNING, no entry stored in dbm for [ENSG00000279605.1]
WARNING, no entry stored in dbm for [ENSG00000237973.1]
WARNING, no entry stored in dbm for [ENSG00000258897.1]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000231105.2]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000185904.12]
WARNING, no entry stored in dbm for [ENSG00000235123.5]
WARNING, no entry stored in dbm for [ENSG00000176124.15]
WARNING, no entry stored in dbm for [ENSG00000207204.1]
WARNING, no entry stored in dbm for [ENSG00000235519.3]
WARNING, no entry stored in dbm for [ENSG00000257612.2]
WARNING, no entry stored in dbm for [ENSG00000174407.13]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000259838.1]
WARNING, no entry stored in dbm for [ENSG00000241095.1]
WARNING, no entry stored in dbm for [ENSG00000154198.14]
WARNING, no entry stored in dbm for [ENSG00000269516.6]
WARNING, no entry stored in dbm for [ENSG00000238132.2]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000210135.1]
WARNING, no entry stored in dbm for [ENSG00000224063.6]
WARNING, no entry stored in dbm for [ENSG00000258551.6]
WARNING, no entry stored in dbm for [ENSG00000286021.2]
WARNING, no entry stored in dbm for [ENSG00000240216.7]
WARNING, no entry stored in dbm for [ENSG00000236360.2]
WARNING, no entry stored in dbm for [ENSG00000263069.6]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000206623.1]
WARNING, no entry stored in dbm for [ENSG00000200224.2]
WARNING, no entry stored in dbm for [ENSG00000252628.2]
WARNING, no entry stored in dbm for [ENSG00000207204.1]
WARNING, no entry stored in dbm for [ENSG00000202350.1]
WARNING, no entry stored in dbm for [ENSG00000202082.2]
WARNING, no entry stored in dbm for [ENSG00000202296.1]
WARNING, no entry stored in dbm for [ENSG00000206896.1]
WARNING, no entry stored in dbm for [ENSG00000232305.1]
WARNING, no entry stored in dbm for [ENSG00000259070.7]
WARNING, no entry stored in dbm for [ENSG00000271064.1]
WARNING, no entry stored in dbm for [ENSG00000226312.7]
WARNING, no entry stored in dbm for [ENSG00000171101.13]
WARNING, no entry stored in dbm for [ENSG00000224039.1]
WARNING, no entry stored in dbm for [ENSG00000284858.1]
WARNING, no entry stored in dbm for [ENSG00000286694.1]
WARNING, no entry stored in dbm for [ENSG00000226101.2]
WARNING, no entry stored in dbm for [ENSG00000266865.6]
WARNING, no entry stored in dbm for [ENSG00000251510.1]
WARNING, no entry stored in dbm for [ENSG00000236456.1]
WARNING, no entry stored in dbm for [ENSG00000225777.1]
WARNING, no entry stored in dbm for [ENSG00000224186.8]
WARNING, no entry stored in dbm for [ENSG00000286982.1]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000213234.4]
WARNING, no entry stored in dbm for [ENSG00000227110.7]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000233627.2]
WARNING, no entry stored in dbm for [ENSG00000002079.14]
WARNING, no entry stored in dbm for [ENSG00000280424.1]
WARNING, no entry stored in dbm for [ENSG00000216657.1]
WARNING, no entry stored in dbm for [ENSG00000232260.2]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [ENSG00000239545.3]
WARNING, no entry stored in dbm for [ENSG00000271661.1]
WARNING, no entry stored in dbm for [ENSG00000286156.1]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000288074.1]
WARNING, no entry stored in dbm for [ENSG00000285683.2]
WARNING, no entry stored in dbm for [ENSG00000235082.2]
WARNING, no entry stored in dbm for [ENSG00000268074.1]
WARNING, no entry stored in dbm for [ENSG00000245937.8]
WARNING, no entry stored in dbm for [ENSG00000227883.1]
WARNING, no entry stored in dbm for [ENSG00000205464.13]
WARNING, no entry stored in dbm for [ENSG00000197595.4]
WARNING, no entry stored in dbm for [ENSG00000286377.1]
WARNING, no entry stored in dbm for [ENSG00000260896.6]
WARNING, no entry stored in dbm for [ENSG00000266379.6]
WARNING, no entry stored in dbm for [ENSG00000259921.1]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000237854.3]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000224541.1]
WARNING, no entry stored in dbm for [ENSG00000284625.1]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000256035.1]
WARNING, no entry stored in dbm for [ENSG00000226996.5]
WARNING, no entry stored in dbm for [ENSG00000237984.3]
WARNING, no entry stored in dbm for [ENSG00000236423.6]
WARNING, no entry stored in dbm for [ENSG00000287700.1]
WARNING, no entry stored in dbm for [ENSG00000255585.3]
WARNING, no entry stored in dbm for [ENSG00000236427.1]
WARNING, no entry stored in dbm for [ENSG00000229422.2]
WARNING, no entry stored in dbm for [ENSG00000279839.1]
WARNING, no entry stored in dbm for [ENSG00000261055.1]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000285280.2]
WARNING, no entry stored in dbm for [ENSG00000234062.8]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000232347.1]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000280222.1]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [ENSG00000279096.2]
WARNING, no entry stored in dbm for [ENSG00000228703.1]
WARNING, no entry stored in dbm for [ENSG00000271551.2]
WARNING, no entry stored in dbm for [ENSG00000219928.2]
WARNING, no entry stored in dbm for [ENSG00000285637.2]
WARNING, no entry stored in dbm for [ENSG00000267559.5]
WARNING, no entry stored in dbm for [ENSG00000232934.8]
WARNING, no entry stored in dbm for [ENSG00000231863.2]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000220685.3]
WARNING, no entry stored in dbm for [ENSG00000228606.3]
WARNING, no entry stored in dbm for [ENSG00000286285.1]
WARNING, no entry stored in dbm for [ENSG00000286071.1]
WARNING, no entry stored in dbm for [ENSG00000233448.2]
WARNING, no entry stored in dbm for [ENSG00000235122.4]
WARNING, no entry stored in dbm for [ENSG00000183239.5]
WARNING, no entry stored in dbm for [ENSG00000243730.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000258526.7]
WARNING, no entry stored in dbm for [ENSG00000277022.1]
WARNING, no entry stored in dbm for [ENSG00000286459.1]
WARNING, no entry stored in dbm for [ENSG00000229017.7]
WARNING, no entry stored in dbm for [ENSG00000225315.2]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000248692.5]
WARNING, no entry stored in dbm for [ENSG00000277146.1]
WARNING, no entry stored in dbm for [ENSG00000207440.1]
WARNING, no entry stored in dbm for [ENSG00000212482.1]
WARNING, no entry stored in dbm for [ENSG00000206730.1]
WARNING, no entry stored in dbm for [ENSG00000202070.1]
WARNING, no entry stored in dbm for [ENSG00000212147.1]
WARNING, no entry stored in dbm for [ENSG00000287682.1]
WARNING, no entry stored in dbm for [ENSG00000279047.4]
WARNING, no entry stored in dbm for [ENSG00000283453.2]
WARNING, no entry stored in dbm for [ENSG00000229322.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000277406.2]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000247679.3]
WARNING, no entry stored in dbm for [ENSG00000277493.1]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000268081.1]
WARNING, no entry stored in dbm for [ENSG00000284675.1]
WARNING, no entry stored in dbm for [ENSG00000277511.1]
WARNING, no entry stored in dbm for [ENSG00000227417.3]
WARNING, no entry stored in dbm for [ENSG00000197149.5]
WARNING, no entry stored in dbm for [ENSG00000225286.1]
WARNING, no entry stored in dbm for [ENSG00000287067.1]
WARNING, no entry stored in dbm for [ENSG00000261444.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000247193.3]
WARNING, no entry stored in dbm for [ENSG00000253154.2]
WARNING, no entry stored in dbm for [ENSG00000250910.8]
WARNING, no entry stored in dbm for [ENSG00000249001.5]
WARNING, no entry stored in dbm for [ENSG00000287400.1]
WARNING, no entry stored in dbm for [ENSG00000239922.2]
WARNING, no entry stored in dbm for [ENSG00000286836.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000248126.1]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [ENSG00000259376.1]
WARNING, no entry stored in dbm for [ENSG00000253363.7]
WARNING, no entry stored in dbm for [ENSG00000250869.2]
WARNING, no entry stored in dbm for [ENSG00000263244.2]
WARNING, no entry stored in dbm for [ENSG00000217289.3]
WARNING, no entry stored in dbm for [ENSG00000272368.2]
WARNING, no entry stored in dbm for [ENSG00000236580.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000272791.1]
WARNING, no entry stored in dbm for [ENSG00000227148.1]
WARNING, no entry stored in dbm for [ENSG00000287388.1]
WARNING, no entry stored in dbm for [ENSG00000254859.1]
WARNING, no entry stored in dbm for [ENSG00000201901.1]
WARNING, no entry stored in dbm for [ENSG00000278621.1]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000261054.1]
WARNING, no entry stored in dbm for [ENSG00000267040.6]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000253907.1]
WARNING, no entry stored in dbm for [ENSG00000261469.1]
WARNING, no entry stored in dbm for [ENSG00000225855.7]
WARNING, no entry stored in dbm for [ENSG00000279122.1]
WARNING, no entry stored in dbm for [ENSG00000279907.1]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000261329.6]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000272384.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000272148.1]
WARNING, no entry stored in dbm for [ENSG00000261526.2]
WARNING, no entry stored in dbm for [ENSG00000269054.2]
WARNING, no entry stored in dbm for [ENSG00000285710.1]
WARNING, no entry stored in dbm for [ENSG00000274184.1]
WARNING, no entry stored in dbm for [ENSG00000249518.1]
WARNING, no entry stored in dbm for [ENSG00000233539.5]
WARNING, no entry stored in dbm for [ENSG00000241281.1]
WARNING, no entry stored in dbm for [ENSG00000268119.6]
WARNING, no entry stored in dbm for [ENSG00000275734.2]
WARNING, no entry stored in dbm for [ENSG00000283695.1]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000267327.2]
WARNING, no entry stored in dbm for [ENSG00000249526.1]
WARNING, no entry stored in dbm for [ENSG00000250258.1]
WARNING, no entry stored in dbm for [ENSG00000233491.8]
WARNING, no entry stored in dbm for [ENSG00000286107.1]
WARNING, no entry stored in dbm for [ENSG00000238165.1]
WARNING, no entry stored in dbm for [ENSG00000238041.3]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000228509.6]
WARNING, no entry stored in dbm for [ENSG00000265784.1]
WARNING, no entry stored in dbm for [ENSG00000275850.1]
WARNING, no entry stored in dbm for [ENSG00000287726.1]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000286059.1]
WARNING, no entry stored in dbm for [ENSG00000227606.2]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000264067.1]
WARNING, no entry stored in dbm for [ENSG00000286883.1]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000259768.6]
WARNING, no entry stored in dbm for [ENSG00000259768.6]
WARNING, no entry stored in dbm for [ENSG00000286788.1]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000260494.1]
WARNING, no entry stored in dbm for [ENSG00000224933.2]
WARNING, no entry stored in dbm for [ENSG00000237813.4]
WARNING, no entry stored in dbm for [ENSG00000269656.1]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000235437.8]
WARNING, no entry stored in dbm for [ENSG00000185710.9]


	* STAR-Fusion complete.  See output: /tmp/nxf.LjY1tSeUAO/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)