-ctat genome lib [/tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.LjY1tSeUAO/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary -sample contains 183890561 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir -J /tmp/nxf.LjY1tSeUAO/aih-tih-sc-ea2fad-R1_B23WHYVLT4_1.Chimeric.out.junction -O /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.LjY1tSeUAO/aih-tih-sc-ea2fad-R1_B23WHYVLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=92307.69/min [30000], rate=94736.84/min [40000], rate=100000.00/min [50000], rate=85714.29/min [60000], rate=76595.74/min [70000], rate=67741.94/min [80000], rate=62337.66/min [90000], rate=59340.66/min [100000], rate=56603.77/min [110000], rate=55000.00/min [120000], rate=54135.34/min [130000], rate=53424.66/min [140000], rate=52500.00/min [150000], rate=52023.12/min [160000], rate=51336.90/min [170000], rate=51000.00/min [180000], rate=50943.40/min [190000], rate=50892.86/min [200000], rate=51063.83/min [210000], rate=50806.45/min [220000], rate=50381.68/min [230000], rate=50181.82/min [240000], rate=50000.00/min [250000], rate=50167.22/min [260000], rate=50485.44/min [270000], rate=50783.70/min [280000], rate=50755.29/min [290000], rate=51026.39/min [300000], rate=51428.57/min [310000], rate=51666.67/min [320000], rate=52032.52/min [330000], rate=52380.95/min [340000], rate=52849.74/min [350000], rate=53030.30/min [360000], rate=53201.97/min [370000], rate=53365.38/min [380000], rate=53647.06/min [390000], rate=53793.10/min [400000], rate=54054.05/min [410000], rate=54185.02/min [420000], rate=54545.45/min [430000], rate=54430.38/min [440000], rate=54658.39/min [450000], rate=54989.82/min [460000], rate=55421.69/min [470000], rate=55731.23/min [480000], rate=55922.33/min [490000], rate=56214.15/min [500000], rate=56285.18/min [510000], rate=56561.92/min [520000], rate=56830.60/min [530000], rate=57091.56/min [540000], rate=57446.81/min [550000], rate=57793.35/min [560000], rate=58031.09/min [570000], rate=58262.35/min [580000], rate=58585.86/min [590000], rate=58803.99/min [600000], rate=59210.53/min [610000], rate=59512.20/min [620000], rate=59711.08/min [630000], rate=60095.39/min [640000], rate=60282.57/min [650000], rate=60559.01/min [660000], rate=60829.49/min [670000], rate=61094.22/min [680000], rate=61445.78/min [690000], rate=61698.96/min [700000], rate=61764.71/min [710000], rate=61739.13/min [720000], rate=61891.12/min [730000], rate=62039.66/min [740000], rate=62272.09/min [750000], rate=62413.31/min [760000], rate=62637.36/min [770000], rate=62857.14/min [780000], rate=63072.78/min [790000], rate=63368.98/min [800000], rate=63576.16/min [810000], rate=63863.34/min [820000], rate=64146.02/min [830000], rate=64341.09/min [840000], rate=64781.49/min [850000], rate=65134.10/min [860000], rate=65482.23/min [870000], rate=65825.98/min [880000], rate=66082.60/min [890000], rate=66417.91/min [900000], rate=66666.67/min [910000], rate=67076.17/min [920000], rate=67399.27/min [930000], rate=67718.45/min [940000], rate=67788.46/min [950000], rate=68100.36/min [960000], rate=68327.40/min [970000], rate=68551.24/min [980000], rate=68771.93/min [990000], rate=69150.17/min [1000000], rate=69364.16/min [1010000], rate=69415.81/min [1020000], rate=69545.45/min [1030000], rate=69594.59/min [1040000], rate=69720.67/min [1050000], rate=69767.44/min [1060000], rate=69890.11/min [1070000], rate=70010.91/min [1080000], rate=69978.40/min [1090000], rate=70021.41/min [1100000], rate=70063.69/min [1110000], rate=70253.16/min [1120000], rate=70366.49/min [1130000], rate=70478.17/min [1140000], rate=70661.16/min [1150000], rate=70696.72/min [1160000], rate=70803.66/min [1170000], rate=70909.09/min [1180000], rate=70588.24/min [1190000], rate=69387.76/min [1200000], rate=68899.52/min [1210000], rate=68490.57/min [1220000], rate=68156.42/min [1230000], rate=67830.88/min [1240000], rate=67821.33/min [1250000], rate=67446.04/min [1260000], rate=67200.00/min [1270000], rate=66842.11/min [1280000], rate=66551.13/min [1290000], rate=66210.44/min [1300000], rate=66101.69/min [1310000], rate=65994.96/min [1320000], rate=65835.41/min [1330000], rate=65679.01/min [1340000], rate=65632.65/min [1350000], rate=65533.98/min [1360000], rate=65489.57/min [1370000], rate=65498.01/min [1380000], rate=65454.55/min [1390000], rate=65463.11/min [1400000], rate=65522.62/min [1410000], rate=65581.40/min [1420000], rate=65690.05/min [1430000], rate=65797.55/min [1440000], rate=65954.20/min [1450000], rate=66109.42/min [1460000], rate=66163.14/min [1470000], rate=65919.28/min [1480000], rate=65631.93/min [1490000], rate=65446.56/min [1500000], rate=65264.68/min [1510000], rate=65086.21/min [1520000], rate=65003.56/min [1530000], rate=64830.51/min [1540000], rate=64705.88/min [1550000], rate=64673.16/min [1560000], rate=64640.88/min [1570000], rate=64609.05/min -building interval tree based on /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=75000.00/min [20000], rate=75000.00/min [30000], rate=78260.87/min [40000], rate=82758.62/min [50000], rate=83333.33/min [60000], rate=81818.18/min [70000], rate=77777.78/min [80000], rate=71641.79/min [90000], rate=68354.43/min [100000], rate=67415.73/min [110000], rate=66000.00/min [120000], rate=64864.86/min [130000], rate=63934.43/min [140000], rate=63157.89/min [150000], rate=62500.00/min [160000], rate=62745.10/min [170000], rate=62576.69/min [180000], rate=63529.41/min [190000], rate=63333.33/min [200000], rate=63829.79/min [210000], rate=63959.39/min [220000], rate=64077.67/min [230000], rate=64788.73/min [240000], rate=65753.42/min [250000], rate=66371.68/min [260000], rate=66952.79/min [270000], rate=67500.00/min [280000], rate=68016.19/min [290000], rate=68503.94/min [300000], rate=68965.52/min [310000], rate=69662.92/min [320000], rate=70588.24/min [330000], rate=70462.63/min [340000], rate=70588.24/min [350000], rate=71186.44/min [360000], rate=70588.24/min [370000], rate=69811.32/min [380000], rate=69300.91/min [390000], rate=69026.55/min [400000], rate=69164.27/min [410000], rate=68907.56/min [420000], rate=68852.46/min [430000], rate=68800.00/min [440000], rate=68393.78/min [450000], rate=67839.20/min [460000], rate=67481.66/min [470000], rate=66983.37/min [480000], rate=66512.70/min [490000], rate=66067.42/min [500000], rate=65217.39/min [510000], rate=64693.45/min [520000], rate=64197.53/min [530000], rate=64112.90/min [540000], rate=64158.42/min [550000], rate=64202.33/min [560000], rate=64122.14/min [570000], rate=64165.10/min [580000], rate=64325.32/min [590000], rate=64363.64/min [600000], rate=64516.13/min [610000], rate=64778.76/min [620000], rate=65034.97/min [630000], rate=65284.97/min [640000], rate=64321.61/min [650000], rate=63829.79/min [660000], rate=63461.54/min [670000], rate=63009.40/min [680000], rate=62385.32/min [690000], rate=61883.41/min [700000], rate=61583.58/min [710000], rate=61471.86/min [720000], rate=61276.60/min [730000], rate=61087.87/min [740000], rate=61072.90/min [750000], rate=61058.34/min [760000], rate=61044.18/min [770000], rate=61111.11/min [780000], rate=61096.61/min [790000], rate=61003.86/min [800000], rate=60913.71/min [810000], rate=60750.00/min [820000], rate=60665.84/min [830000], rate=60657.73/min [840000], rate=60649.82/min [850000], rate=60714.29/min [860000], rate=60849.06/min [870000], rate=60981.31/min [880000], rate=61181.92/min [890000], rate=61379.31/min [900000], rate=61573.55/min [910000], rate=61834.65/min [920000], rate=61883.41/min [930000], rate=62000.00/min [940000], rate=61572.05/min [950000], rate=61422.41/min [960000], rate=61276.60/min [970000], rate=61263.16/min [980000], rate=61186.26/min [990000], rate=61174.05/min [1000000], rate=61099.80/min [1010000], rate=60843.37/min [1020000], rate=60834.99/min [1030000], rate=60766.96/min [1040000], rate=60759.49/min [1050000], rate=60810.81/min [1060000], rate=60919.54/min [1070000], rate=61026.62/min [1080000], rate=61074.46/min [1090000], rate=61293.35/min [1100000], rate=61509.79/min [1110000], rate=61723.82/min [1120000], rate=62049.86/min [1130000], rate=62316.18/min [1140000], rate=62637.36/min [1150000], rate=62956.20/min [1160000], rate=63215.26/min [1170000], rate=63529.41/min [1180000], rate=63726.37/min [1190000], rate=63921.22/min [1200000], rate=63829.79/min [1210000], rate=63740.12/min [1220000], rate=63652.17/min [1230000], rate=63565.89/min [1240000], rate=63481.23/min [1250000], rate=63451.78/min [1260000], rate=63422.82/min [1270000], rate=63394.34/min [1280000], rate=63523.57/min [1290000], rate=63546.80/min [1300000], rate=63621.53/min [1310000], rate=63592.23/min [1320000], rate=63665.59/min [1330000], rate=63738.02/min [1340000], rate=63809.52/min [1350000], rate=63981.04/min [1360000], rate=64150.94/min [1370000], rate=64319.25/min [1380000], rate=64435.80/min [1390000], rate=64551.08/min [1400000], rate=64417.18/min [1410000], rate=64285.71/min [1420000], rate=64204.97/min [1430000], rate=64173.52/min [1440000], rate=64047.44/min [1450000], rate=63970.59/min [1460000], rate=63941.61/min [1470000], rate=63820.55/min [1480000], rate=63793.10/min [1490000], rate=63811.56/min [1500000], rate=63784.55/min [1510000], rate=63847.78/min [1520000], rate=63820.85/min [1530000], rate=63883.09/min [1540000], rate=63944.64/min [1550000], rate=64049.59/min [1560000], rate=64197.53/min [1570000], rate=64344.26/min -building interval tree based on /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=120000.00/min [20000], rate=92307.69/min [30000], rate=69230.77/min [40000], rate=61538.46/min [50000], rate=60000.00/min [60000], rate=61016.95/min [70000], rate=61764.71/min [80000], rate=61538.46/min [90000], rate=62790.70/min [100000], rate=63157.89/min [110000], rate=64705.88/min [120000], rate=65454.55/min [130000], rate=66666.67/min [140000], rate=68292.68/min [150000], rate=69230.77/min [160000], rate=70588.24/min [170000], rate=72340.43/min [180000], rate=74482.76/min [190000], rate=77551.02/min [200000], rate=80536.91/min [210000], rate=80254.78/min [220000], rate=79041.92/min [230000], rate=77966.10/min [240000], rate=77005.35/min [250000], rate=76142.13/min [260000], rate=75362.32/min [270000], rate=74654.38/min [280000], rate=74336.28/min [290000], rate=74042.55/min [300000], rate=74380.17/min [310000], rate=74400.00/min [320000], rate=74708.17/min [330000], rate=75000.00/min [340000], rate=75276.75/min [350000], rate=75539.57/min [360000], rate=75789.47/min [370000], rate=76027.40/min [380000], rate=74267.10/min [390000], rate=73125.00/min [400000], rate=72289.16/min [410000], rate=71720.12/min [420000], rate=70985.92/min [430000], rate=70684.93/min [440000], rate=70400.00/min [450000], rate=70312.50/min [460000], rate=69873.42/min [470000], rate=69975.19/min [480000], rate=69902.91/min [490000], rate=69503.55/min [500000], rate=69444.44/min [510000], rate=69230.77/min [520000], rate=68271.33/min [530000], rate=67372.88/min [540000], rate=66804.12/min [550000], rate=66532.26/min [560000], rate=66403.16/min [570000], rate=66279.07/min [580000], rate=65784.50/min [590000], rate=65555.56/min [600000], rate=65099.46/min [610000], rate=64893.62/min [620000], rate=64808.36/min [630000], rate=64726.03/min [640000], rate=64321.61/min [650000], rate=64356.44/min [660000], rate=64600.33/min [670000], rate=64838.71/min [680000], rate=65071.77/min [690000], rate=65299.68/min [700000], rate=64814.81/min [710000], rate=64060.15/min [720000], rate=63343.11/min [730000], rate=62571.43/min [740000], rate=61924.69/min [750000], rate=61475.41/min [760000], rate=61126.01/min [770000], rate=60869.57/min [780000], rate=60779.22/min [790000], rate=60613.81/min [800000], rate=60377.36/min [810000], rate=60074.17/min [820000], rate=59854.01/min [830000], rate=59569.38/min [840000], rate=59154.93/min [850000], rate=59027.78/min [860000], rate=58636.36/min [870000], rate=58389.26/min [880000], rate=58213.89/min [890000], rate=58233.37/min [900000], rate=58189.66/min [910000], rate=58208.96/min [920000], rate=58227.85/min [930000], rate=58368.20/min [940000], rate=58324.72/min [950000], rate=58341.86/min [960000], rate=58358.66/min [970000], rate=58200.00/min [980000], rate=58333.33/min [990000], rate=58349.71/min [1000000], rate=58309.04/min [1010000], rate=58381.50/min [1020000], rate=58341.28/min [1030000], rate=58356.94/min [1040000], rate=58263.31/min [1050000], rate=58279.37/min [1060000], rate=58241.76/min [1070000], rate=58204.90/min [1080000], rate=58273.38/min [1090000], rate=58236.87/min [1100000], rate=58252.43/min [1110000], rate=58267.72/min [1120000], rate=58131.49/min [1130000], rate=58047.95/min [1140000], rate=57966.10/min [1150000], rate=57983.19/min [1160000], rate=57903.49/min [1170000], rate=57825.37/min [1180000], rate=57843.14/min [1190000], rate=57766.99/min [1200000], rate=57784.91/min [1210000], rate=57848.61/min [1220000], rate=57911.39/min [1230000], rate=58018.87/min [1240000], rate=58125.00/min [1250000], rate=58184.64/min [1260000], rate=58288.36/min [1270000], rate=58390.80/min [1280000], rate=58492.00/min [1290000], rate=58591.98/min [1300000], rate=58646.62/min [1310000], rate=58656.72/min [1320000], rate=58536.59/min [1330000], rate=58590.31/min [1340000], rate=58643.33/min [1350000], rate=58695.65/min [1360000], rate=58832.01/min [1370000], rate=58714.29/min [1380000], rate=58105.26/min [1390000], rate=57876.47/min [1400000], rate=57573.68/min [1410000], rate=57355.93/min [1420000], rate=57142.86/min [1430000], rate=57047.87/min [1440000], rate=56954.52/min [1450000], rate=56862.75/min [1460000], rate=56772.52/min [1470000], rate=56720.26/min [1480000], rate=56704.98/min [1490000], rate=56653.99/min [1500000], rate=56675.06/min [1510000], rate=56695.87/min [1520000], rate=56751.71/min [1530000], rate=56842.11/min [1540000], rate=56896.55/min [1550000], rate=56915.54/min [1560000], rate=56899.70/min [1570000], rate=56884.06/min -building interval tree based on /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=120000.00/min [20000], rate=120000.00/min [30000], rate=138461.54/min [40000], rate=141176.47/min [50000], rate=142857.14/min [60000], rate=138461.54/min [70000], rate=135483.87/min [80000], rate=137142.86/min [90000], rate=138461.54/min [100000], rate=133333.33/min [110000], rate=132000.00/min [120000], rate=130909.09/min [130000], rate=132203.39/min [140000], rate=135483.87/min [150000], rate=132352.94/min [160000], rate=133333.33/min [170000], rate=134210.53/min [180000], rate=136708.86/min [190000], rate=139024.39/min [200000], rate=125000.00/min [210000], rate=110526.32/min [220000], rate=100763.36/min [230000], rate=93243.24/min [240000], rate=87804.88/min [250000], rate=82872.93/min [260000], rate=78391.96/min [270000], rate=75000.00/min [280000], rate=72413.79/min [290000], rate=69600.00/min [300000], rate=67669.17/min [310000], rate=65034.97/min [320000], rate=63366.34/min [330000], rate=62068.97/min [340000], rate=61261.26/min [350000], rate=60693.64/min [360000], rate=60335.20/min [370000], rate=60000.00/min [380000], rate=59842.52/min [390000], rate=59240.51/min [400000], rate=58536.59/min [410000], rate=58156.03/min [420000], rate=57665.90/min [430000], rate=56703.30/min [440000], rate=55813.95/min [450000], rate=55441.48/min [460000], rate=55089.82/min [470000], rate=54545.45/min [480000], rate=54339.62/min [490000], rate=54044.12/min [500000], rate=53763.44/min [510000], rate=53496.50/min [520000], rate=53516.30/min [530000], rate=53355.70/min [540000], rate=53289.47/min [550000], rate=53398.06/min [560000], rate=53418.12/min [570000], rate=53437.50/min [580000], rate=53538.46/min [590000], rate=53555.22/min [600000], rate=53651.27/min [610000], rate=53744.49/min [620000], rate=53913.04/min [630000], rate=54077.25/min [640000], rate=54314.00/min [650000], rate=54545.45/min [660000], rate=54771.78/min [670000], rate=54993.16/min [680000], rate=55284.55/min [690000], rate=55645.16/min [700000], rate=56074.77/min [710000], rate=56052.63/min [720000], rate=55886.16/min [730000], rate=55867.35/min [740000], rate=55919.40/min [750000], rate=55900.62/min [760000], rate=55813.95/min [770000], rate=55932.20/min [780000], rate=55913.98/min [790000], rate=56028.37/min [800000], rate=55944.06/min [810000], rate=56055.36/min [820000], rate=56164.38/min [830000], rate=56334.84/min [840000], rate=56438.97/min [850000], rate=56541.02/min [860000], rate=56703.30/min [870000], rate=56924.75/min [880000], rate=57204.77/min [890000], rate=57419.35/min [900000], rate=57692.31/min [910000], rate=57961.78/min [920000], rate=57922.35/min [930000], rate=57525.77/min [940000], rate=57200.81/min [950000], rate=56943.06/min [960000], rate=56304.99/min [970000], rate=56123.43/min [980000], rate=55893.54/min [990000], rate=55722.33/min [1000000], rate=55504.16/min [1010000], rate=55443.73/min [1020000], rate=55384.62/min [1030000], rate=55277.28/min [1040000], rate=55221.24/min [1050000], rate=55166.37/min [1060000], rate=55160.45/min [1070000], rate=55202.06/min [1080000], rate=55242.97/min [1090000], rate=55189.87/min [1100000], rate=55183.95/min [1110000], rate=55178.13/min [1120000], rate=55217.75/min [1130000], rate=55256.72/min [1140000], rate=55295.07/min [1150000], rate=55377.21/min [1160000], rate=55458.17/min [1170000], rate=55625.99/min [1180000], rate=55791.96/min [1190000], rate=55956.11/min [1200000], rate=56118.47/min [1210000], rate=56279.07/min [1220000], rate=56437.93/min [1230000], rate=56508.42/min [1240000], rate=56193.35/min [1250000], rate=55803.57/min [1260000], rate=55506.61/min [1270000], rate=55377.91/min [1280000], rate=54896.35/min [1290000], rate=54661.02/min [1300000], rate=54507.34/min [1310000], rate=54356.85/min [1320000], rate=54283.76/min [1330000], rate=54211.96/min [1340000], rate=54177.90/min [1350000], rate=54108.22/min [1360000], rate=54075.55/min [1370000], rate=54114.55/min [1380000], rate=54153.04/min [1390000], rate=54296.88/min [1400000], rate=54368.93/min [1410000], rate=54475.21/min [1420000], rate=54545.45/min [1430000], rate=54684.51/min [1440000], rate=54787.57/min [1450000], rate=54924.24/min [1460000], rate=55059.71/min [1470000], rate=55193.99/min [1480000], rate=55361.60/min [1490000], rate=55562.46/min [1500000], rate=55727.55/min [1510000], rate=55856.97/min [1520000], rate=55916.62/min [1530000], rate=55873.40/min [1540000], rate=55864.57/min [1550000], rate=55855.86/min [1560000], rate=55913.98/min [1570000], rate=56004.76/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir --filt_file /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 4800000.00 reads per min processed... 5000000.00 reads per min processed... 4500000.00 reads per min processed... 4666666.67 reads per min processed... 4363636.36 reads per min processed... 4500000.00 reads per min processed... 4615384.62 reads per min processed... 4400000.00 reads per min processed... 4500000.00 reads per min processed... 4333333.33 reads per min processed... 4421052.63 reads per min processed... 4285714.29 reads per min processed... 4173913.04 reads per min processed... 4250000.00 reads per min processed... 4153846.15 reads per min processed... 4222222.22 reads per min processed... 4137931.03 reads per min processed... 4200000.00 reads per min processed... 4258064.52 reads per min processed... 4181818.18 reads per min processed... 4235294.12 reads per min processed... 4285714.29 reads per min processed... 4333333.33 reads per min processed... 4263157.89 reads per min processed... 4307692.31 reads per min processed... 4350000.00 reads per min processed... 4390243.90 reads per min processed... 4428571.43 reads per min processed... 4571428.57 reads per min processed... 4500000.00 reads per min processed... 4533333.33 reads per min processed... 4468085.11 reads per min processed... 4500000.00 reads per min processed... 4530612.24 reads per min processed... 4470588.24 reads per min processed... 4500000.00 reads per min processed... 4528301.89 reads per min processed... 4472727.27 reads per min processed... 4500000.00 reads per min processed... 4526315.79 reads per min processed... 4551724.14 reads per min processed... 4500000.00 reads per min processed... 4524590.16 reads per min processed... 4476190.48 reads per min processed... 4500000.00 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.LjY1tSeUAO/aih-tih-sc-ea2fad-R1_B23WHYVLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -283532.617955 EM: Round [1] log likelihood: -283410.675268 EM: Round [2] log likelihood: -283367.591475 EM: Round [3] log likelihood: -283347.740727 EM: Round [4] log likelihood: -283337.328223 EM: Round [5] log likelihood: -283331.390641 EM: Round [6] log likelihood: -283327.767594 EM: Round [7] log likelihood: -283325.422000 EM: Round [8] log likelihood: -283323.823897 EM: Round [9] log likelihood: -283322.686725 EM: Round [10] log likelihood: -283321.846837 EM: Round [11] log likelihood: -283321.206141 EM: Round [12] log likelihood: -283320.703407 EM: Round [13] log likelihood: -283320.299097 EM: Round [14] log likelihood: -283319.966912 EM: Round [15] log likelihood: -283319.688891 EM: Round [16] log likelihood: -283319.452455 EM: Round [17] log likelihood: -283319.248598 EM: Round [18] log likelihood: -283319.070733 EM: Round [19] log likelihood: -283318.913952 EM: Round [20] log likelihood: -283318.774531 EM: Round [21] log likelihood: -283318.649601 EM: Round [22] log likelihood: -283318.536916 EM: Round [23] log likelihood: -283318.434697 EM: Round [24] log likelihood: -283318.341511 EM: Round [25] log likelihood: -283318.256197 EM: Round [26] log likelihood: -283318.177795 EM: Round [27] log likelihood: -283318.105510 EM: Round [28] log likelihood: -283318.038672 EM: Round [29] log likelihood: -283317.976715 EM: Round [30] log likelihood: -283317.919154 EM: Round [31] log likelihood: -283317.865568 EM: Round [32] log likelihood: -283317.815595 EM: Round [33] log likelihood: -283317.768917 EM: Round [34] log likelihood: -283317.725251 EM: Round [35] log likelihood: -283317.684350 EM: Round [36] log likelihood: -283317.645992 EM: Round [37] log likelihood: -283317.609979 EM: Round [38] log likelihood: -283317.576133 EM: Round [39] log likelihood: -283317.544293 EM: Round [40] log likelihood: -283317.514312 EM: Round [41] log likelihood: -283317.486059 EM: Round [42] log likelihood: -283317.459412 EM: Round [43] log likelihood: -283317.434262 EM: Round [44] log likelihood: -283317.410506 EM: Round [45] log likelihood: -283317.388053 EM: Round [46] log likelihood: -283317.366816 EM: Round [47] log likelihood: -283317.346716 EM: Round [48] log likelihood: -283317.327682 EM: Round [49] log likelihood: -283317.309645 EM: Round [50] log likelihood: -283317.292544 EM: Round [51] log likelihood: -283317.276320 EM: Round [52] log likelihood: -283317.260921 EM: Round [53] log likelihood: -283317.246295 EM: Round [54] log likelihood: -283317.232397 EM: Round [55] log likelihood: -283317.219184 EM: Round [56] log likelihood: -283317.206616 EM: Round [57] log likelihood: -283317.194655 EM: Round [58] log likelihood: -283317.183265 EM: Round [59] log likelihood: -283317.172416 EM: Round [60] log likelihood: -283317.162075 EM: Round [61] log likelihood: -283317.152215 EM: Round [62] log likelihood: -283317.142809 EM: Round [63] log likelihood: -283317.133831 EM: Round [64] log likelihood: -283317.125259 EM: Round [65] log likelihood: -283317.117070 EM: Round [66] log likelihood: -283317.109244 EM: Round [67] log likelihood: -283317.101762 EM: Round [68] log likelihood: -283317.094605 EM: Round [69] log likelihood: -283317.087756 EM: Round [70] log likelihood: -283317.081201 EM: Round [71] log likelihood: -283317.074922 EM: Round [72] log likelihood: -283317.068907 EM: Round [73] log likelihood: -283317.063142 EM: Round [74] log likelihood: -283317.057614 EM: Round [75] log likelihood: -283317.052312 EM: Round [76] log likelihood: -283317.047225 EM: Round [77] log likelihood: -283317.042342 EM: Round [78] log likelihood: -283317.037653 EM: Round [79] log likelihood: -283317.033150 EM: Round [80] log likelihood: -283317.028822 EM: Round [81] log likelihood: -283317.024662 EM: Round [82] log likelihood: -283317.020663 EM: Round [83] log likelihood: -283317.016816 EM: Round [84] log likelihood: -283317.013114 EM: Round [85] log likelihood: -283317.009552 EM: Round [86] log likelihood: -283317.006122 EM: Round [87] log likelihood: -283317.002819 EM: Round [88] log likelihood: -283316.999638 EM: Round [89] log likelihood: -283316.996572 EM: Round [90] log likelihood: -283316.993617 EM: Round [91] log likelihood: -283316.990768 EM: Round [92] log likelihood: -283316.988021 EM: Round [93] log likelihood: -283316.985371 EM: Round [94] log likelihood: -283316.982814 EM: Round [95] log likelihood: -283316.980346 EM: Round [96] log likelihood: -283316.977964 EM: Round [97] log likelihood: -283316.975663 EM: Round [98] log likelihood: -283316.973442 EM: Round [99] log likelihood: -283316.971296 EM: Round [100] log likelihood: -283316.969222 EM: Round [101] log likelihood: -283316.967218 EM: Round [102] log likelihood: -283316.965281 EM: Round [103] log likelihood: -283316.963408 EM: Round [104] log likelihood: -283316.961597 EM: Round [105] log likelihood: -283316.959845 EM: Round [106] log likelihood: -283316.958151 EM: Round [107] log likelihood: -283316.956511 EM: Round [108] log likelihood: -283316.954924 EM: Round [109] log likelihood: -283316.953388 EM: Round [110] log likelihood: -283316.951902 EM: Round [111] log likelihood: -283316.950462 EM: Round [112] log likelihood: -283316.949068 EM: Round [113] log likelihood: -283316.947717 EM: Round [114] log likelihood: -283316.946409 EM: Round [115] log likelihood: -283316.945142 EM: Round [116] log likelihood: -283316.943914 EM: Round [117] log likelihood: -283316.942724 EM: Round [118] log likelihood: -283316.941571 EM: Round [119] log likelihood: -283316.940452 EM: Round [120] log likelihood: -283316.939368 EM: Round [121] log likelihood: -283316.938317 EM: Round [122] log likelihood: -283316.937298 EM: Round [123] log likelihood: -283316.936309 EM: Round [124] log likelihood: -283316.935350 EM: Round [125] log likelihood: -283316.934419 EM: Round [126] log likelihood: -283316.933517 EM: Round [127] log likelihood: -283316.932641 EM: Round [128] log likelihood: -283316.931791 EM: Round [129] log likelihood: -283316.930966 EM: Round [130] log likelihood: -283316.930165 EM: Round [131] log likelihood: -283316.929388 EM: Round [132] log likelihood: -283316.928633 EM: Round [133] log likelihood: -283316.927900 EM: Round [134] log likelihood: -283316.927189 EM: Round [135] log likelihood: -283316.926498 EM: Round [136] log likelihood: -283316.925827 EM: Round [137] log likelihood: -283316.925175 EM: Round [138] log likelihood: -283316.924542 EM: Round [139] log likelihood: -283316.923927 EM: Round [140] log likelihood: -283316.923329 EM: Round [141] log likelihood: -283316.922748 EM: Round [142] log likelihood: -283316.922184 EM: Round [143] log likelihood: -283316.921636 EM: Round [144] log likelihood: -283316.921103 EM: Round [145] log likelihood: -283316.920585 EM: Round [146] log likelihood: -283316.920082 EM: Round [147] log likelihood: -283316.919592 EM: Round [148] log likelihood: -283316.919117 EM: Round [149] log likelihood: -283316.918654 EM: Round [150] log likelihood: -283316.918204 EM: Round [151] log likelihood: -283316.917767 EM: Round [152] log likelihood: -283316.917342 EM: Round [153] log likelihood: -283316.916928 EM: Round [154] log likelihood: -283316.916526 EM: Round [155] log likelihood: -283316.916135 EM: Round [156] log likelihood: -283316.915754 EM: Round [157] log likelihood: -283316.915384 EM: Round [158] log likelihood: -283316.915024 EM: Round [159] log likelihood: -283316.914674 EM: Round [160] log likelihood: -283316.914333 EM: Round [161] log likelihood: -283316.914001 EM: Round [162] log likelihood: -283316.913678 EM: Round [163] log likelihood: -283316.913364 EM: Round [164] log likelihood: -283316.913058 EM: Round [165] log likelihood: -283316.912761 EM: Round [166] log likelihood: -283316.912471 EM: Round [167] log likelihood: -283316.912189 EM: Round [168] log likelihood: -283316.911915 EM: Round [169] log likelihood: -283316.911648 EM: Round [170] log likelihood: -283316.911387 EM: Round [171] log likelihood: -283316.911134 EM: Round [172] log likelihood: -283316.910888 EM: Round [173] log likelihood: -283316.910647 EM: Round [174] log likelihood: -283316.910413 EM: Round [175] log likelihood: -283316.910186 EM: Round [176] log likelihood: -283316.909964 EM: Round [177] log likelihood: -283316.909748 EM: Round [178] log likelihood: -283316.909537 EM: Round [179] log likelihood: -283316.909332 EM: Round [180] log likelihood: -283316.909132 EM: Round [181] log likelihood: -283316.908938 EM: Round [182] log likelihood: -283316.908748 EM: Round [183] log likelihood: -283316.908563 EM: Round [184] log likelihood: -283316.908383 EM: Round [185] log likelihood: -283316.908208 EM: Round [186] log likelihood: -283316.908036 EM: Round [187] log likelihood: -283316.907870 EM: Round [188] log likelihood: -283316.907707 EM: Round [189] log likelihood: -283316.907549 EM: Round [190] log likelihood: -283316.907394 EM: Round [191] log likelihood: -283316.907244 EM: Round [192] log likelihood: -283316.907097 EM: Round [193] log likelihood: -283316.906954 EM: Round [194] log likelihood: -283316.906814 EM: Round [195] log likelihood: -283316.906678 EM: Round [196] log likelihood: -283316.906545 EM: Round [197] log likelihood: -283316.906416 EM: Round [198] log likelihood: -283316.906289 EM: Round [199] log likelihood: -283316.906166 EM: Round [200] log likelihood: -283316.906046 EM: Round [201] log likelihood: -283316.905928 EM: Round [202] log likelihood: -283316.905814 EM: Round [203] log likelihood: -283316.905702 EM: Round [204] log likelihood: -283316.905593 EM: Round [205] log likelihood: -283316.905487 EM: Round [206] log likelihood: -283316.905383 EM: Round [207] log likelihood: -283316.905281 EM: Round [208] log likelihood: -283316.905183 EM: Stopping iterations at round 208 due to insufficient improvement in likelihood. EM: Starting log likelihood: -282985.049501 EM: Round [1] log likelihood: -282884.879746 EM: Round [2] log likelihood: -282850.148996 EM: Round [3] log likelihood: -282834.250652 EM: Round [4] log likelihood: -282825.935238 EM: Round [5] log likelihood: -282821.200615 EM: Round [6] log likelihood: -282818.311096 EM: Round [7] log likelihood: -282816.436127 EM: Round [8] log likelihood: -282815.153135 EM: Round [9] log likelihood: -282814.234556 EM: Round [10] log likelihood: -282813.550807 EM: Round [11] log likelihood: -282813.024366 EM: Round [12] log likelihood: -282812.606932 EM: Round [13] log likelihood: -282812.267384 EM: Round [14] log likelihood: -282811.985074 EM: Round [15] log likelihood: -282811.745936 EM: Round [16] log likelihood: -282811.540141 EM: Round [17] log likelihood: -282811.360665 EM: Round [18] log likelihood: -282811.202371 EM: Round [19] log likelihood: -282811.061430 EM: Round [20] log likelihood: -282810.934931 EM: Round [21] log likelihood: -282810.820622 EM: Round [22] log likelihood: -282810.716731 EM: Round [23] log likelihood: -282810.621845 EM: Round [24] log likelihood: -282810.534817 EM: Round [25] log likelihood: -282810.454710 EM: Round [26] log likelihood: -282810.380740 EM: Round [27] log likelihood: -282810.312251 EM: Round [28] log likelihood: -282810.248686 EM: Round [29] log likelihood: -282810.189566 EM: Round [30] log likelihood: -282810.134478 EM: Round [31] log likelihood: -282810.083061 EM: Round [32] log likelihood: -282810.034999 EM: Round [33] log likelihood: -282809.990011 EM: Round [34] log likelihood: -282809.947848 EM: Round [35] log likelihood: -282809.908289 EM: Round [36] log likelihood: -282809.871133 EM: Round [37] log likelihood: -282809.836200 EM: Round [38] log likelihood: -282809.803327 EM: Round [39] log likelihood: -282809.772367 EM: Round [40] log likelihood: -282809.743185 EM: Round [41] log likelihood: -282809.715656 EM: Round [42] log likelihood: -282809.689669 EM: Round [43] log likelihood: -282809.665121 EM: Round [44] log likelihood: -282809.641915 EM: Round [45] log likelihood: -282809.619964 EM: Round [46] log likelihood: -282809.599188 EM: Round [47] log likelihood: -282809.579511 EM: Round [48] log likelihood: -282809.560865 EM: Round [49] log likelihood: -282809.543185 EM: Round [50] log likelihood: -282809.526411 EM: Round [51] log likelihood: -282809.510490 EM: Round [52] log likelihood: -282809.495368 EM: Round [53] log likelihood: -282809.480999 EM: Round [54] log likelihood: -282809.467338 EM: Round [55] log likelihood: -282809.454344 EM: Round [56] log likelihood: -282809.441977 EM: Round [57] log likelihood: -282809.430202 EM: Round [58] log likelihood: -282809.418985 EM: Round [59] log likelihood: -282809.408295 EM: Round [60] log likelihood: -282809.398101 EM: Round [61] log likelihood: -282809.388377 EM: Round [62] log likelihood: -282809.379097 EM: Round [63] log likelihood: -282809.370236 EM: Round [64] log likelihood: -282809.361772 EM: Round [65] log likelihood: -282809.353683 EM: Round [66] log likelihood: -282809.345950 EM: Round [67] log likelihood: -282809.338554 EM: Round [68] log likelihood: -282809.331476 EM: Round [69] log likelihood: -282809.324702 EM: Round [70] log likelihood: -282809.318214 EM: Round [71] log likelihood: -282809.311999 EM: Round [72] log likelihood: -282809.306043 EM: Round [73] log likelihood: -282809.300332 EM: Round [74] log likelihood: -282809.294855 EM: Round [75] log likelihood: -282809.289600 EM: Round [76] log likelihood: -282809.284556 EM: Round [77] log likelihood: -282809.279713 EM: Round [78] log likelihood: -282809.275062 EM: Round [79] log likelihood: -282809.270593 EM: Round [80] log likelihood: -282809.266297 EM: Round [81] log likelihood: -282809.262167 EM: Round [82] log likelihood: -282809.258195 EM: Round [83] log likelihood: -282809.254374 EM: Round [84] log likelihood: -282809.250696 EM: Round [85] log likelihood: -282809.247156 EM: Round [86] log likelihood: -282809.243747 EM: Round [87] log likelihood: -282809.240463 EM: Round [88] log likelihood: -282809.237300 EM: Round [89] log likelihood: -282809.234250 EM: Round [90] log likelihood: -282809.231311 EM: Round [91] log likelihood: -282809.228476 EM: Round [92] log likelihood: -282809.225742 EM: Round [93] log likelihood: -282809.223104 EM: Round [94] log likelihood: -282809.220558 EM: Round [95] log likelihood: -282809.218101 EM: Round [96] log likelihood: -282809.215728 EM: Round [97] log likelihood: -282809.213437 EM: Round [98] log likelihood: -282809.211224 EM: Round [99] log likelihood: -282809.209086 EM: Round [100] log likelihood: -282809.207019 EM: Round [101] log likelihood: -282809.205022 EM: Round [102] log likelihood: -282809.203091 EM: Round [103] log likelihood: -282809.201224 EM: Round [104] log likelihood: -282809.199418 EM: Round [105] log likelihood: -282809.197672 EM: Round [106] log likelihood: -282809.195982 EM: Round [107] log likelihood: -282809.194346 EM: Round [108] log likelihood: -282809.192764 EM: Round [109] log likelihood: -282809.191231 EM: Round [110] log likelihood: -282809.189748 EM: Round [111] log likelihood: -282809.188312 EM: Round [112] log likelihood: -282809.186921 EM: Round [113] log likelihood: -282809.185573 EM: Round [114] log likelihood: -282809.184268 EM: Round [115] log likelihood: -282809.183003 EM: Round [116] log likelihood: -282809.181777 EM: Round [117] log likelihood: -282809.180589 EM: Round [118] log likelihood: -282809.179437 EM: Round [119] log likelihood: -282809.178321 EM: Round [120] log likelihood: -282809.177238 EM: Round [121] log likelihood: -282809.176189 EM: Round [122] log likelihood: -282809.175171 EM: Round [123] log likelihood: -282809.174183 EM: Round [124] log likelihood: -282809.173226 EM: Round [125] log likelihood: -282809.172296 EM: Round [126] log likelihood: -282809.171395 EM: Round [127] log likelihood: -282809.170520 EM: Round [128] log likelihood: -282809.169671 EM: Round [129] log likelihood: -282809.168846 EM: Round [130] log likelihood: -282809.168046 EM: Round [131] log likelihood: -282809.167270 EM: Round [132] log likelihood: -282809.166516 EM: Round [133] log likelihood: -282809.165784 EM: Round [134] log likelihood: -282809.165073 EM: Round [135] log likelihood: -282809.164382 EM: Round [136] log likelihood: -282809.163712 EM: Round [137] log likelihood: -282809.163061 EM: Round [138] log likelihood: -282809.162428 EM: Round [139] log likelihood: -282809.161813 EM: Round [140] log likelihood: -282809.161216 EM: Round [141] log likelihood: -282809.160636 EM: Round [142] log likelihood: -282809.160072 EM: Round [143] log likelihood: -282809.159524 EM: Round [144] log likelihood: -282809.158991 EM: Round [145] log likelihood: -282809.158474 EM: Round [146] log likelihood: -282809.157970 EM: Round [147] log likelihood: -282809.157481 EM: Round [148] log likelihood: -282809.157006 EM: Round [149] log likelihood: -282809.156543 EM: Round [150] log likelihood: -282809.156094 EM: Round [151] log likelihood: -282809.155657 EM: Round [152] log likelihood: -282809.155232 EM: Round [153] log likelihood: -282809.154818 EM: Round [154] log likelihood: -282809.154416 EM: Round [155] log likelihood: -282809.154025 EM: Round [156] log likelihood: -282809.153645 EM: Round [157] log likelihood: -282809.153275 EM: Round [158] log likelihood: -282809.152915 EM: Round [159] log likelihood: -282809.152564 EM: Round [160] log likelihood: -282809.152224 EM: Round [161] log likelihood: -282809.151892 EM: Round [162] log likelihood: -282809.151569 EM: Round [163] log likelihood: -282809.151255 EM: Round [164] log likelihood: -282809.150950 EM: Round [165] log likelihood: -282809.150652 EM: Round [166] log likelihood: -282809.150363 EM: Round [167] log likelihood: -282809.150081 EM: Round [168] log likelihood: -282809.149806 EM: Round [169] log likelihood: -282809.149539 EM: Round [170] log likelihood: -282809.149279 EM: Round [171] log likelihood: -282809.149026 EM: Round [172] log likelihood: -282809.148779 EM: Round [173] log likelihood: -282809.148539 EM: Round [174] log likelihood: -282809.148305 EM: Round [175] log likelihood: -282809.148078 EM: Round [176] log likelihood: -282809.147856 EM: Round [177] log likelihood: -282809.147640 EM: Round [178] log likelihood: -282809.147429 EM: Round [179] log likelihood: -282809.147224 EM: Round [180] log likelihood: -282809.147024 EM: Round [181] log likelihood: -282809.146830 EM: Round [182] log likelihood: -282809.146640 EM: Round [183] log likelihood: -282809.146455 EM: Round [184] log likelihood: -282809.146275 EM: Round [185] log likelihood: -282809.146100 EM: Round [186] log likelihood: -282809.145929 EM: Round [187] log likelihood: -282809.145762 EM: Round [188] log likelihood: -282809.145599 EM: Round [189] log likelihood: -282809.145441 EM: Round [190] log likelihood: -282809.145287 EM: Round [191] log likelihood: -282809.145136 EM: Round [192] log likelihood: -282809.144989 EM: Round [193] log likelihood: -282809.144846 EM: Round [194] log likelihood: -282809.144706 EM: Round [195] log likelihood: -282809.144570 EM: Round [196] log likelihood: -282809.144437 EM: Round [197] log likelihood: -282809.144308 EM: Round [198] log likelihood: -282809.144182 EM: Round [199] log likelihood: -282809.144058 EM: Round [200] log likelihood: -282809.143938 EM: Round [201] log likelihood: -282809.143821 EM: Round [202] log likelihood: -282809.143706 EM: Round [203] log likelihood: -282809.143595 EM: Round [204] log likelihood: -282809.143486 EM: Round [205] log likelihood: -282809.143379 EM: Round [206] log likelihood: -282809.143275 EM: Round [207] log likelihood: -282809.143174 EM: Round [208] log likelihood: -282809.143075 EM: Stopping iterations at round 208 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 183890561 > /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir > /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir --annotate /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir -done, see /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 2167, filtered: 11790) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.LjY1tSeUAO/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.LjY1tSeUAO/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000259345.7] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000259345.7] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000259543.1] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000226835.3] WARNING, no entry stored in dbm for [ENSG00000237574.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000236021.2] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000234569.1] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000225492.6] WARNING, no entry stored in dbm for [ENSG00000286021.2] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000225689.2] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000256389.2] WARNING, no entry stored in dbm for [ENSG00000253844.1] WARNING, no entry stored in dbm for [ENSG00000251557.2] WARNING, no entry stored in dbm for [ENSG00000223773.7] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000225096.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000274712.2] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000255325.2] WARNING, no entry stored in dbm for [ENSG00000266904.6] WARNING, no entry stored in dbm for [ENSG00000286953.1] WARNING, no entry stored in dbm for [ENSG00000226107.1] WARNING, no entry stored in dbm for [ENSG00000228007.1] WARNING, no entry stored in dbm for [ENSG00000215002.2] WARNING, no entry stored in dbm for [ENSG00000269244.1] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000234231.4] WARNING, no entry stored in dbm for [ENSG00000256582.1] WARNING, no entry stored in dbm for [ENSG00000260776.6] WARNING, no entry stored in dbm for [ENSG00000220867.1] WARNING, no entry stored in dbm for [ENSG00000234878.1] WARNING, no entry stored in dbm for [ENSG00000160172.10] WARNING, no entry stored in dbm for [ENSG00000250320.6] WARNING, no entry stored in dbm for [ENSG00000234152.1] WARNING, no entry stored in dbm for [ENSG00000186704.9] WARNING, no entry stored in dbm for [ENSG00000259755.1] WARNING, no entry stored in dbm for [ENSG00000279711.1] WARNING, no entry stored in dbm for [ENSG00000218418.2] WARNING, no entry stored in dbm for [ENSG00000219302.2] WARNING, no entry stored in dbm for [ENSG00000233379.2] WARNING, no entry stored in dbm for [ENSG00000226310.1] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000233031.1] WARNING, no entry stored in dbm for [ENSG00000227077.3] WARNING, no entry stored in dbm for [ENSG00000249001.5] WARNING, no entry stored in dbm for [ENSG00000240519.1] WARNING, no entry stored in dbm for [ENSG00000218175.2] WARNING, no entry stored in dbm for [ENSG00000265936.1] WARNING, no entry stored in dbm for [ENSG00000214259.3] WARNING, no entry stored in dbm for [ENSG00000247765.2] WARNING, no entry stored in dbm for [ENSG00000258590.5] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000288585.1] WARNING, no entry stored in dbm for [ENSG00000237004.4] WARNING, no entry stored in dbm for [ENSG00000214514.8] WARNING, no entry stored in dbm for [ENSG00000133624.13] WARNING, no entry stored in dbm for [ENSG00000287985.1] WARNING, no entry stored in dbm for [ENSG00000276375.1] WARNING, no entry stored in dbm for [ENSG00000277866.1] WARNING, no entry stored in dbm for [ENSG00000225067.4] WARNING, no entry stored in dbm for [ENSG00000288091.1] WARNING, no entry stored in dbm for [ENSG00000213801.4] WARNING, no entry stored in dbm for [ENSG00000205549.10] WARNING, no entry stored in dbm for [ENSG00000226471.6] WARNING, no entry stored in dbm for [ENSG00000197258.5] WARNING, no entry stored in dbm for [ENSG00000255282.6] WARNING, no entry stored in dbm for [ENSG00000249438.2] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000232098.3] WARNING, no entry stored in dbm for [ENSG00000236107.10] WARNING, no entry stored in dbm for [ENSG00000272281.6] WARNING, no entry stored in dbm for [ENSG00000249835.2] WARNING, no entry stored in dbm for [ENSG00000231290.6] WARNING, no entry stored in dbm for [ENSG00000245248.8] WARNING, no entry stored in dbm for [ENSG00000286694.1] WARNING, no entry stored in dbm for [ENSG00000279910.1] WARNING, no entry stored in dbm for [ENSG00000254101.7] WARNING, no entry stored in dbm for [ENSG00000234711.1] WARNING, no entry stored in dbm for [ENSG00000237298.10] WARNING, no entry stored in dbm for [ENSG00000205231.1] WARNING, no entry stored in dbm for [ENSG00000258384.1] WARNING, no entry stored in dbm for [ENSG00000224728.1] WARNING, no entry stored in dbm for [ENSG00000200701.1] WARNING, no entry stored in dbm for [ENSG00000252599.1] WARNING, no entry stored in dbm for [ENSG00000201641.1] WARNING, no entry stored in dbm for [ENSG00000226149.6] WARNING, no entry stored in dbm for [ENSG00000241657.1] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000215506.5] WARNING, no entry stored in dbm for [ENSG00000232894.1] WARNING, no entry stored in dbm for [ENSG00000232894.1] WARNING, no entry stored in dbm for [ENSG00000219642.2] WARNING, no entry stored in dbm for [ENSG00000223511.7] WARNING, no entry stored in dbm for [ENSG00000227372.12] WARNING, no entry stored in dbm for [ENSG00000279278.1] WARNING, no entry stored in dbm for [ENSG00000261405.2] WARNING, no entry stored in dbm for [ENSG00000214653.4] WARNING, no entry stored in dbm for [ENSG00000224812.3] WARNING, no entry stored in dbm for [ENSG00000265630.2] WARNING, no entry stored in dbm for [ENSG00000284977.2] WARNING, no entry stored in dbm for [ENSG00000267465.7] WARNING, no entry stored in dbm for [ENSG00000224822.1] WARNING, no entry stored in dbm for [ENSG00000186960.12] WARNING, no entry stored in dbm for [ENSG00000214919.3] WARNING, no entry stored in dbm for [ENSG00000199289.1] WARNING, no entry stored in dbm for [ENSG00000283440.1] WARNING, no entry stored in dbm for [ENSG00000182841.12] WARNING, no entry stored in dbm for [ENSG00000266489.3] WARNING, no entry stored in dbm for [ENSG00000232633.4] WARNING, no entry stored in dbm for [ENSG00000215006.4] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000257588.1] WARNING, no entry stored in dbm for [ENSG00000200101.1] WARNING, no entry stored in dbm for [ENSG00000207115.1] WARNING, no entry stored in dbm for [ENSG00000207291.1] WARNING, no entry stored in dbm for [ENSG00000201641.1] WARNING, no entry stored in dbm for [ENSG00000204832.10] WARNING, no entry stored in dbm for [ENSG00000266490.1] WARNING, no entry stored in dbm for [ENSG00000288543.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000259642.2] WARNING, no entry stored in dbm for [ENSG00000263821.1] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000277191.1] WARNING, no entry stored in dbm for [ENSG00000203875.13] WARNING, no entry stored in dbm for [ENSG00000267321.3] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000249252.5] WARNING, no entry stored in dbm for [ENSG00000274487.2] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000279345.1] WARNING, no entry stored in dbm for [ENSG00000258232.2] WARNING, no entry stored in dbm for [ENSG00000226818.1] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000286092.1] WARNING, no entry stored in dbm for [ENSG00000240489.1] WARNING, no entry stored in dbm for [ENSG00000268267.1] WARNING, no entry stored in dbm for [ENSG00000262801.6] WARNING, no entry stored in dbm for [ENSG00000179406.8] WARNING, no entry stored in dbm for [ENSG00000279072.1] WARNING, no entry stored in dbm for [ENSG00000225944.1] WARNING, no entry stored in dbm for [ENSG00000237298.10] WARNING, no entry stored in dbm for [ENSG00000251920.1] WARNING, no entry stored in dbm for [ENSG00000287385.1] WARNING, no entry stored in dbm for [ENSG00000269983.1] WARNING, no entry stored in dbm for [ENSG00000259895.1] WARNING, no entry stored in dbm for [ENSG00000237574.1] WARNING, no entry stored in dbm for [ENSG00000237574.1] WARNING, no entry stored in dbm for [ENSG00000281641.3] WARNING, no entry stored in dbm for [ENSG00000228596.1] WARNING, no entry stored in dbm for [ENSG00000219463.1] WARNING, no entry stored in dbm for [ENSG00000231764.10] WARNING, no entry stored in dbm for [ENSG00000213664.4] WARNING, no entry stored in dbm for [ENSG00000224864.4] WARNING, no entry stored in dbm for [ENSG00000223525.1] WARNING, no entry stored in dbm for [ENSG00000233369.7] WARNING, no entry stored in dbm for [ENSG00000232540.1] WARNING, no entry stored in dbm for [ENSG00000224683.1] WARNING, no entry stored in dbm for [ENSG00000228007.1] WARNING, no entry stored in dbm for [ENSG00000247193.3] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000213295.3] WARNING, no entry stored in dbm for [ENSG00000234559.1] WARNING, no entry stored in dbm for [ENSG00000218716.1] WARNING, no entry stored in dbm for [ENSG00000200296.1] WARNING, no entry stored in dbm for [ENSG00000237161.4] WARNING, no entry stored in dbm for [ENSG00000243944.5] WARNING, no entry stored in dbm for [ENSG00000222386.1] WARNING, no entry stored in dbm for [ENSG00000201510.1] WARNING, no entry stored in dbm for [ENSG00000201600.1] WARNING, no entry stored in dbm for [ENSG00000200243.1] WARNING, no entry stored in dbm for [ENSG00000273344.1] WARNING, no entry stored in dbm for [ENSG00000285847.2] WARNING, no entry stored in dbm for [ENSG00000226860.1] WARNING, no entry stored in dbm for [ENSG00000258427.3] WARNING, no entry stored in dbm for [ENSG00000241350.1] WARNING, no entry stored in dbm for [ENSG00000281357.3] WARNING, no entry stored in dbm for [ENSG00000229502.5] WARNING, no entry stored in dbm for [ENSG00000269386.5] WARNING, no entry stored in dbm for [ENSG00000251273.4] WARNING, no entry stored in dbm for [ENSG00000251143.1] WARNING, no entry stored in dbm for [ENSG00000249859.12] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000287660.1] WARNING, no entry stored in dbm for [ENSG00000257771.6] WARNING, no entry stored in dbm for [ENSG00000249312.1] WARNING, no entry stored in dbm for [ENSG00000236671.9] WARNING, no entry stored in dbm for [ENSG00000279080.1] WARNING, no entry stored in dbm for [ENSG00000266179.2] WARNING, no entry stored in dbm for [ENSG00000249456.1] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [ENSG00000226633.2] WARNING, no entry stored in dbm for [ENSG00000237424.1] WARNING, no entry stored in dbm for [ENSG00000237468.2] WARNING, no entry stored in dbm for [ENSG00000279924.1] WARNING, no entry stored in dbm for [ENSG00000284630.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000274602.5] WARNING, no entry stored in dbm for [ENSG00000201223.1] WARNING, no entry stored in dbm for [ENSG00000224204.1] WARNING, no entry stored in dbm for [ENSG00000177410.13] WARNING, no entry stored in dbm for [ENSG00000239899.3] WARNING, no entry stored in dbm for [ENSG00000255185.6] WARNING, no entry stored in dbm for [ENSG00000152931.9] WARNING, no entry stored in dbm for [ENSG00000214106.9] WARNING, no entry stored in dbm for [ENSG00000254658.3] WARNING, no entry stored in dbm for [ENSG00000241472.7] WARNING, no entry stored in dbm for [ENSG00000280119.1] WARNING, no entry stored in dbm for [ENSG00000244491.1] WARNING, no entry stored in dbm for [ENSG00000280291.1] WARNING, no entry stored in dbm for [ENSG00000219085.1] WARNING, no entry stored in dbm for [ENSG00000242070.1] WARNING, no entry stored in dbm for [ENSG00000266916.7] WARNING, no entry stored in dbm for [ENSG00000225391.5] WARNING, no entry stored in dbm for [ENSG00000235978.6] WARNING, no entry stored in dbm for [ENSG00000249541.1] WARNING, no entry stored in dbm for [ENSG00000254051.1] WARNING, no entry stored in dbm for [ENSG00000135502.19] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000207089.1] WARNING, no entry stored in dbm for [ENSG00000202229.1] WARNING, no entry stored in dbm for [ENSG00000271408.1] WARNING, no entry stored in dbm for [ENSG00000276735.1] WARNING, no entry stored in dbm for [ENSG00000236051.7] WARNING, no entry stored in dbm for [ENSG00000228323.2] WARNING, no entry stored in dbm for [ENSG00000228323.2] WARNING, no entry stored in dbm for [ENSG00000105988.6] WARNING, no entry stored in dbm for [ENSG00000214955.5] WARNING, no entry stored in dbm for [ENSG00000251141.6] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000125462.19] WARNING, no entry stored in dbm for [ENSG00000233006.8] WARNING, no entry stored in dbm for [ENSG00000224184.6] WARNING, no entry stored in dbm for [ENSG00000266325.1] WARNING, no entry stored in dbm for [ENSG00000266325.1] WARNING, no entry stored in dbm for [ENSG00000266325.1] WARNING, no entry stored in dbm for [ENSG00000227288.3] WARNING, no entry stored in dbm for [ENSG00000257444.1] WARNING, no entry stored in dbm for [ENSG00000271237.1] WARNING, no entry stored in dbm for [ENSG00000251842.1] WARNING, no entry stored in dbm for [ENSG00000201852.1] WARNING, no entry stored in dbm for [ENSG00000222041.11] WARNING, no entry stored in dbm for [ENSG00000257759.2] WARNING, no entry stored in dbm for [ENSG00000242326.1] WARNING, no entry stored in dbm for [ENSG00000215424.10] WARNING, no entry stored in dbm for [ENSG00000215424.10] WARNING, no entry stored in dbm for [ENSG00000248323.7] WARNING, no entry stored in dbm for [ENSG00000283692.2] WARNING, no entry stored in dbm for [ENSG00000255248.9] WARNING, no entry stored in dbm for [ENSG00000234222.6] WARNING, no entry stored in dbm for [ENSG00000274372.5] WARNING, no entry stored in dbm for [ENSG00000232527.8] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000241288.8] WARNING, no entry stored in dbm for [ENSG00000250754.6] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000238042.5] WARNING, no entry stored in dbm for [ENSG00000281903.2] WARNING, no entry stored in dbm for [ENSG00000248461.3] WARNING, no entry stored in dbm for [ENSG00000224153.3] WARNING, no entry stored in dbm for [ENSG00000243832.1] WARNING, no entry stored in dbm for [ENSG00000280721.1] WARNING, no entry stored in dbm for [ENSG00000226983.3] WARNING, no entry stored in dbm for [ENSG00000279579.3] WARNING, no entry stored in dbm for [ENSG00000218357.3] WARNING, no entry stored in dbm for [ENSG00000168746.8] WARNING, no entry stored in dbm for [ENSG00000233158.1] WARNING, no entry stored in dbm for [ENSG00000234766.2] WARNING, no entry stored in dbm for [ENSG00000234380.2] WARNING, no entry stored in dbm for [ENSG00000218426.5] WARNING, no entry stored in dbm for [ENSG00000215866.8] WARNING, no entry stored in dbm for [ENSG00000223715.3] WARNING, no entry stored in dbm for [ENSG00000224577.3] WARNING, no entry stored in dbm for [ENSG00000212694.8] WARNING, no entry stored in dbm for [ENSG00000224559.2] WARNING, no entry stored in dbm for [ENSG00000282508.2] WARNING, no entry stored in dbm for [ENSG00000235703.6] WARNING, no entry stored in dbm for [ENSG00000235703.6] WARNING, no entry stored in dbm for [ENSG00000241769.7] WARNING, no entry stored in dbm for [ENSG00000228221.6] WARNING, no entry stored in dbm for [ENSG00000233559.2] WARNING, no entry stored in dbm for [ENSG00000248360.7] WARNING, no entry stored in dbm for [ENSG00000238121.6] WARNING, no entry stored in dbm for [ENSG00000223768.2] WARNING, no entry stored in dbm for [ENSG00000203930.12] WARNING, no entry stored in dbm for [ENSG00000233930.4] WARNING, no entry stored in dbm for [ENSG00000233930.4] WARNING, no entry stored in dbm for [ENSG00000233930.4] WARNING, no entry stored in dbm for [ENSG00000286948.1] WARNING, no entry stored in dbm for [ENSG00000257844.2] WARNING, no entry stored in dbm for [ENSG00000287090.1] WARNING, no entry stored in dbm for [ENSG00000245694.10] WARNING, no entry stored in dbm for [ENSG00000261824.7] WARNING, no entry stored in dbm for [ENSG00000258944.1] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000225733.6] WARNING, no entry stored in dbm for [ENSG00000179428.2] WARNING, no entry stored in dbm for [ENSG00000261737.1] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000217041.1] WARNING, no entry stored in dbm for [ENSG00000236373.2] WARNING, no entry stored in dbm for [ENSG00000125631.7] WARNING, no entry stored in dbm for [ENSG00000227000.2] WARNING, no entry stored in dbm for [ENSG00000259722.2] WARNING, no entry stored in dbm for [ENSG00000237398.1] WARNING, no entry stored in dbm for [ENSG00000234500.1] WARNING, no entry stored in dbm for [ENSG00000280254.1] WARNING, no entry stored in dbm for [ENSG00000246090.7] WARNING, no entry stored in dbm for [ENSG00000230596.3] WARNING, no entry stored in dbm for [ENSG00000228393.4] WARNING, no entry stored in dbm for [ENSG00000260776.6] WARNING, no entry stored in dbm for [ENSG00000242797.3] WARNING, no entry stored in dbm for [ENSG00000283095.1] WARNING, no entry stored in dbm for [ENSG00000218227.3] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000229180.7] WARNING, no entry stored in dbm for [ENSG00000269692.1] WARNING, no entry stored in dbm for [ENSG00000160172.10] WARNING, no entry stored in dbm for [ENSG00000232300.1] WARNING, no entry stored in dbm for [ENSG00000236438.7] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000260565.7] WARNING, no entry stored in dbm for [ENSG00000225774.2] WARNING, no entry stored in dbm for [ENSG00000231648.2] WARNING, no entry stored in dbm for [ENSG00000188828.13] WARNING, no entry stored in dbm for [ENSG00000241769.7] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000265545.1] WARNING, no entry stored in dbm for [ENSG00000279145.2] WARNING, no entry stored in dbm for [ENSG00000232656.9] WARNING, no entry stored in dbm for [ENSG00000279605.1] WARNING, no entry stored in dbm for [ENSG00000237973.1] WARNING, no entry stored in dbm for [ENSG00000258897.1] WARNING, no entry stored in dbm for [ENSG00000259683.1] WARNING, no entry stored in dbm for [ENSG00000231105.2] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000185904.12] WARNING, no entry stored in dbm for [ENSG00000235123.5] WARNING, no entry stored in dbm for [ENSG00000176124.15] WARNING, no entry stored in dbm for [ENSG00000207204.1] WARNING, no entry stored in dbm for [ENSG00000235519.3] WARNING, no entry stored in dbm for [ENSG00000257612.2] WARNING, no entry stored in dbm for [ENSG00000174407.13] WARNING, no entry stored in dbm for [ENSG00000226950.8] WARNING, no entry stored in dbm for [ENSG00000259838.1] WARNING, no entry stored in dbm for [ENSG00000241095.1] WARNING, no entry stored in dbm for [ENSG00000154198.14] WARNING, no entry stored in dbm for [ENSG00000269516.6] WARNING, no entry stored in dbm for [ENSG00000238132.2] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000210135.1] WARNING, no entry stored in dbm for [ENSG00000224063.6] WARNING, no entry stored in dbm for [ENSG00000258551.6] WARNING, no entry stored in dbm for [ENSG00000286021.2] WARNING, no entry stored in dbm for [ENSG00000240216.7] WARNING, no entry stored in dbm for [ENSG00000236360.2] WARNING, no entry stored in dbm for [ENSG00000263069.6] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000206623.1] WARNING, no entry stored in dbm for [ENSG00000200224.2] WARNING, no entry stored in dbm for [ENSG00000252628.2] WARNING, no entry stored in dbm for [ENSG00000207204.1] WARNING, no entry stored in dbm for [ENSG00000202350.1] WARNING, no entry stored in dbm for [ENSG00000202082.2] WARNING, no entry stored in dbm for [ENSG00000202296.1] WARNING, no entry stored in dbm for [ENSG00000206896.1] WARNING, no entry stored in dbm for [ENSG00000232305.1] WARNING, no entry stored in dbm for [ENSG00000259070.7] WARNING, no entry stored in dbm for [ENSG00000271064.1] WARNING, no entry stored in dbm for [ENSG00000226312.7] WARNING, no entry stored in dbm for [ENSG00000171101.13] WARNING, no entry stored in dbm for [ENSG00000224039.1] WARNING, no entry stored in dbm for [ENSG00000284858.1] WARNING, no entry stored in dbm for [ENSG00000286694.1] WARNING, no entry stored in dbm for [ENSG00000226101.2] WARNING, no entry stored in dbm for [ENSG00000266865.6] WARNING, no entry stored in dbm for [ENSG00000251510.1] WARNING, no entry stored in dbm for [ENSG00000236456.1] WARNING, no entry stored in dbm for [ENSG00000225777.1] WARNING, no entry stored in dbm for [ENSG00000224186.8] WARNING, no entry stored in dbm for [ENSG00000286982.1] WARNING, no entry stored in dbm for [ENSG00000272168.8] WARNING, no entry stored in dbm for [ENSG00000213234.4] WARNING, no entry stored in dbm for [ENSG00000227110.7] WARNING, no entry stored in dbm for [ENSG00000286215.1] WARNING, no entry stored in dbm for [ENSG00000204352.4] WARNING, no entry stored in dbm for [ENSG00000233627.2] WARNING, no entry stored in dbm for [ENSG00000002079.14] WARNING, no entry stored in dbm for [ENSG00000280424.1] WARNING, no entry stored in dbm for [ENSG00000216657.1] WARNING, no entry stored in dbm for [ENSG00000232260.2] WARNING, no entry stored in dbm for [ENSG00000270066.3] WARNING, no entry stored in dbm for [ENSG00000239545.3] WARNING, no entry stored in dbm for [ENSG00000271661.1] WARNING, no entry stored in dbm for [ENSG00000286156.1] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000288074.1] WARNING, no entry stored in dbm for [ENSG00000285683.2] WARNING, no entry stored in dbm for [ENSG00000235082.2] WARNING, no entry stored in dbm for [ENSG00000268074.1] WARNING, no entry stored in dbm for [ENSG00000245937.8] WARNING, no entry stored in dbm for [ENSG00000227883.1] WARNING, no entry stored in dbm for [ENSG00000205464.13] WARNING, no entry stored in dbm for [ENSG00000197595.4] WARNING, no entry stored in dbm for [ENSG00000286377.1] WARNING, no entry stored in dbm for [ENSG00000260896.6] WARNING, no entry stored in dbm for [ENSG00000266379.6] WARNING, no entry stored in dbm for [ENSG00000259921.1] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000237854.3] WARNING, no entry stored in dbm for [ENSG00000238045.9] WARNING, no entry stored in dbm for [ENSG00000224541.1] WARNING, no entry stored in dbm for [ENSG00000284625.1] WARNING, no entry stored in dbm for [ENSG00000248618.1] WARNING, no entry stored in dbm for [ENSG00000256035.1] WARNING, no entry stored in dbm for [ENSG00000226996.5] WARNING, no entry stored in dbm for [ENSG00000237984.3] WARNING, no entry stored in dbm for [ENSG00000236423.6] WARNING, no entry stored in dbm for [ENSG00000287700.1] WARNING, no entry stored in dbm for [ENSG00000255585.3] WARNING, no entry stored in dbm for [ENSG00000236427.1] WARNING, no entry stored in dbm for [ENSG00000229422.2] WARNING, no entry stored in dbm for [ENSG00000279839.1] WARNING, no entry stored in dbm for [ENSG00000261055.1] WARNING, no entry stored in dbm for [ENSG00000225096.3] WARNING, no entry stored in dbm for [ENSG00000285280.2] WARNING, no entry stored in dbm for [ENSG00000234062.8] WARNING, no entry stored in dbm for [ENSG00000235749.3] WARNING, no entry stored in dbm for [ENSG00000232347.1] WARNING, no entry stored in dbm for [ENSG00000228685.1] WARNING, no entry stored in dbm for [ENSG00000234851.4] WARNING, no entry stored in dbm for [ENSG00000280222.1] WARNING, no entry stored in dbm for [ENSG00000270066.3] WARNING, no entry stored in dbm for [ENSG00000270066.3] WARNING, no entry stored in dbm for [ENSG00000279096.2] WARNING, no entry stored in dbm for [ENSG00000228703.1] WARNING, no entry stored in dbm for [ENSG00000271551.2] WARNING, no entry stored in dbm for [ENSG00000219928.2] WARNING, no entry stored in dbm for [ENSG00000285637.2] WARNING, no entry stored in dbm for [ENSG00000267559.5] WARNING, no entry stored in dbm for [ENSG00000232934.8] WARNING, no entry stored in dbm for [ENSG00000231863.2] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000220685.3] WARNING, no entry stored in dbm for [ENSG00000228606.3] WARNING, no entry stored in dbm for [ENSG00000286285.1] WARNING, no entry stored in dbm for [ENSG00000286071.1] WARNING, no entry stored in dbm for [ENSG00000233448.2] WARNING, no entry stored in dbm for [ENSG00000235122.4] WARNING, no entry stored in dbm for [ENSG00000183239.5] WARNING, no entry stored in dbm for [ENSG00000243730.2] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000258526.7] WARNING, no entry stored in dbm for [ENSG00000277022.1] WARNING, no entry stored in dbm for [ENSG00000286459.1] WARNING, no entry stored in dbm for [ENSG00000229017.7] WARNING, no entry stored in dbm for [ENSG00000225315.2] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000248692.5] WARNING, no entry stored in dbm for [ENSG00000277146.1] WARNING, no entry stored in dbm for [ENSG00000207440.1] WARNING, no entry stored in dbm for [ENSG00000212482.1] WARNING, no entry stored in dbm for [ENSG00000206730.1] WARNING, no entry stored in dbm for [ENSG00000202070.1] WARNING, no entry stored in dbm for [ENSG00000212147.1] WARNING, no entry stored in dbm for [ENSG00000287682.1] WARNING, no entry stored in dbm for [ENSG00000279047.4] WARNING, no entry stored in dbm for [ENSG00000283453.2] WARNING, no entry stored in dbm for [ENSG00000229322.1] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000277406.2] WARNING, no entry stored in dbm for [ENSG00000275557.1] WARNING, no entry stored in dbm for [ENSG00000274423.1] WARNING, no entry stored in dbm for [ENSG00000247679.3] WARNING, no entry stored in dbm for [ENSG00000277493.1] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000238035.8] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000268081.1] WARNING, no entry stored in dbm for [ENSG00000284675.1] WARNING, no entry stored in dbm for [ENSG00000277511.1] WARNING, no entry stored in dbm for [ENSG00000227417.3] WARNING, no entry stored in dbm for [ENSG00000197149.5] WARNING, no entry stored in dbm for [ENSG00000225286.1] WARNING, no entry stored in dbm for [ENSG00000287067.1] WARNING, no entry stored in dbm for [ENSG00000261444.1] WARNING, no entry stored in dbm for [ENSG00000277458.1] WARNING, no entry stored in dbm for [ENSG00000247193.3] WARNING, no entry stored in dbm for [ENSG00000253154.2] WARNING, no entry stored in dbm for [ENSG00000250910.8] WARNING, no entry stored in dbm for [ENSG00000249001.5] WARNING, no entry stored in dbm for [ENSG00000287400.1] WARNING, no entry stored in dbm for [ENSG00000239922.2] WARNING, no entry stored in dbm for [ENSG00000286836.1] WARNING, no entry stored in dbm for [ENSG00000282057.1] WARNING, no entry stored in dbm for [ENSG00000268362.6] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000248126.1] WARNING, no entry stored in dbm for [ENSG00000267198.1] WARNING, no entry stored in dbm for [ENSG00000131484.4] WARNING, no entry stored in dbm for [ENSG00000259376.1] WARNING, no entry stored in dbm for [ENSG00000253363.7] WARNING, no entry stored in dbm for [ENSG00000250869.2] WARNING, no entry stored in dbm for [ENSG00000263244.2] WARNING, no entry stored in dbm for [ENSG00000217289.3] WARNING, no entry stored in dbm for [ENSG00000272368.2] WARNING, no entry stored in dbm for [ENSG00000236580.1] WARNING, no entry stored in dbm for [ENSG00000234129.8] WARNING, no entry stored in dbm for [ENSG00000272791.1] WARNING, no entry stored in dbm for [ENSG00000227148.1] WARNING, no entry stored in dbm for [ENSG00000287388.1] WARNING, no entry stored in dbm for [ENSG00000254859.1] WARNING, no entry stored in dbm for [ENSG00000201901.1] WARNING, no entry stored in dbm for [ENSG00000278621.1] WARNING, no entry stored in dbm for [ENSG00000259345.7] WARNING, no entry stored in dbm for [ENSG00000261054.1] WARNING, no entry stored in dbm for [ENSG00000267040.6] WARNING, no entry stored in dbm for [ENSG00000257817.2] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000272800.3] WARNING, no entry stored in dbm for [ENSG00000253907.1] WARNING, no entry stored in dbm for [ENSG00000261469.1] WARNING, no entry stored in dbm for [ENSG00000225855.7] WARNING, no entry stored in dbm for [ENSG00000279122.1] WARNING, no entry stored in dbm for [ENSG00000279907.1] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000285106.2] WARNING, no entry stored in dbm for [ENSG00000261329.6] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000272384.1] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000272148.1] WARNING, no entry stored in dbm for [ENSG00000261526.2] WARNING, no entry stored in dbm for [ENSG00000269054.2] WARNING, no entry stored in dbm for [ENSG00000285710.1] WARNING, no entry stored in dbm for [ENSG00000274184.1] WARNING, no entry stored in dbm for [ENSG00000249518.1] WARNING, no entry stored in dbm for [ENSG00000233539.5] WARNING, no entry stored in dbm for [ENSG00000241281.1] WARNING, no entry stored in dbm for [ENSG00000268119.6] WARNING, no entry stored in dbm for [ENSG00000275734.2] WARNING, no entry stored in dbm for [ENSG00000283695.1] WARNING, no entry stored in dbm for [ENSG00000111788.10] WARNING, no entry stored in dbm for [ENSG00000267327.2] WARNING, no entry stored in dbm for [ENSG00000249526.1] WARNING, no entry stored in dbm for [ENSG00000250258.1] WARNING, no entry stored in dbm for [ENSG00000233491.8] WARNING, no entry stored in dbm for [ENSG00000286107.1] WARNING, no entry stored in dbm for [ENSG00000238165.1] WARNING, no entry stored in dbm for [ENSG00000238041.3] WARNING, no entry stored in dbm for [ENSG00000277458.1] WARNING, no entry stored in dbm for [ENSG00000277458.1] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000228509.6] WARNING, no entry stored in dbm for [ENSG00000265784.1] WARNING, no entry stored in dbm for [ENSG00000275850.1] WARNING, no entry stored in dbm for [ENSG00000287726.1] WARNING, no entry stored in dbm for [ENSG00000262879.6] WARNING, no entry stored in dbm for [ENSG00000286059.1] WARNING, no entry stored in dbm for [ENSG00000227606.2] WARNING, no entry stored in dbm for [ENSG00000274712.2] WARNING, no entry stored in dbm for [ENSG00000264067.1] WARNING, no entry stored in dbm for [ENSG00000286883.1] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000259768.6] WARNING, no entry stored in dbm for [ENSG00000259768.6] WARNING, no entry stored in dbm for [ENSG00000286788.1] WARNING, no entry stored in dbm for [ENSG00000268163.1] WARNING, no entry stored in dbm for [ENSG00000260494.1] WARNING, no entry stored in dbm for [ENSG00000224933.2] WARNING, no entry stored in dbm for [ENSG00000237813.4] WARNING, no entry stored in dbm for [ENSG00000269656.1] WARNING, no entry stored in dbm for [ENSG00000247556.6] WARNING, no entry stored in dbm for [ENSG00000235437.8] WARNING, no entry stored in dbm for [ENSG00000185710.9] * STAR-Fusion complete. See output: /tmp/nxf.LjY1tSeUAO/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)