AIH curated blacklist: matched 4 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 95
Pass (FILTER=PASS): 5 (5.3%)
Fail (FILTER=FAIL): 90 (94.7%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 4
All 4 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high): 18
confidence_below_min(medium<high): 11
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 3
total_reads_below_min(6.0<8.0): 2
confidence_below_min(medium<high);aih_curated_blacklist: 2
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 2
total_reads_below_min(7.0<8.0): 1
total_reads_below_min(3.0<8.0): 1
Breakdown by confidence:
high: 5 pass, 4 fail (total: 9)
low: 0 pass, 64 fail (total: 64)
medium: 0 pass, 22 fail (total: 22)
Arriba filter: 95 rows -> 5 PASS; wrote aih-tih-sc-60f9b9-R1_B23WHYVLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-60f9b9-R1_B23WHYVLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-60f9b9-R1_B23WHYVLT4_1.arriba.fusions.filter_summary.txt