File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/07/3e0153731a39033da54cff7e6abf93/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/07/3e0153731a39033da54cff7e6abf93/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3a/fca51bf471dc4d44ca10e8cb6d3db4/aih-tih-sc-1d9134-R1_B23WHYVLT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/8be9f2bcbd344360dc7a7aca06818e/aih-tih-sc-1d9134-R1_B23WHYVLT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/07/3e0153731a39033da54cff7e6abf93/.command.run
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-1d9134-R1_B23WHYVLT4_1/abundance.h5
Successfully converted aih-tih-sc-1d9134-R1_B23WHYVLT4_1/abundance.h5 to aih-tih-sc-1d9134-R1_B23WHYVLT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-1d9134-R1_B23WHYVLT4_1
  Mean Fragment Length: 134.7 bp
  Median Fragment Length: 124.0 bp
  pct_mito_est_counts: 0.019%
  pct_ribo_est_counts: 0.896%
  pct_hk_est_counts: 0.467%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.044%
  pct_ribo_tpm: 3.063%
  pct_hk_tpm: 0.766%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.007%