Started job on | Jun 08 07:34:13
Started mapping on | Jun 08 07:36:16
Finished on | Jun 08 08:24:31
Mapping speed, Million of reads per hour | 295.67
Number of input reads | 237764079
Average input read length | 250
UNIQUE READS:
Uniquely mapped reads number | 228487811
Uniquely mapped reads % | 96.10%
Average mapped length | 249.69
Number of splices: Total | 295249704
Number of splices: Annotated (sjdb) | 292706087
Number of splices: GT/AG | 292818690
Number of splices: GC/AG | 1630781
Number of splices: AT/AC | 182856
Number of splices: Non-canonical | 617377
Mismatch rate per base, % | 0.19%
Deletion rate per base | 0.01%
Deletion average length | 1.07
Insertion rate per base | 0.00%
Insertion average length | 1.49
MULTI-MAPPING READS:
Number of reads mapped to multiple loci | 4976767
% of reads mapped to multiple loci | 2.09%
Number of reads mapped to too many loci | 221659
% of reads mapped to too many loci | 0.09%
UNMAPPED READS:
Number of reads unmapped: too many mismatches | 354705
% of reads unmapped: too many mismatches | 0.15%
Number of reads unmapped: too short | 2188469
% of reads unmapped: too short | 0.92%
Number of reads unmapped: other | 203993
% of reads unmapped: other | 0.09%
CHIMERIC READS:
Number of chimeric reads | 2971412
% of chimeric reads | 1.25%