File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/01/b82fc891357f2dfdfd5121583fe06d/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/c05083cb8cc9a05374811d497bb26d/aih-tih-sc-176637-R1_B23WHYVLT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/01/b82fc891357f2dfdfd5121583fe06d/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/01/b82fc891357f2dfdfd5121583fe06d/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d6/785ca8ebebdae4d0d0a48c732dc51b/aih-tih-sc-176637-R1_B23WHYVLT4_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-176637-R1_B23WHYVLT4_1/abundance.h5
Successfully converted aih-tih-sc-176637-R1_B23WHYVLT4_1/abundance.h5 to aih-tih-sc-176637-R1_B23WHYVLT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-176637-R1_B23WHYVLT4_1
  Mean Fragment Length: 147.7 bp
  Median Fragment Length: 134.0 bp
  pct_mito_est_counts: 0.053%
  pct_ribo_est_counts: 0.774%
  pct_hk_est_counts: 0.45%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.116%
  pct_ribo_tpm: 2.39%
  pct_hk_tpm: 0.692%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.012%