Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/013786bf60e48795a82bf865049234/ref_annot.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/66/580a4df22601377d25b31a30ca6d88/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/66/580a4df22601377d25b31a30ca6d88/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/9a2d661969b12628f87c3cc235c1c4/aih-tih-sc-1d89ab-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/9c5736f9c8abfd82971a210e994225/aih-tih-sc-1d89ab-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam
==> STAGING COMPLETE (5 inputs)

null device 
          1 
null device 
          1 
total = 312953850
[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-1d89ab-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	312953850
Known Splicing Events:	308341820
Partial Novel Splicing Events:	1891219
Novel Splicing Events:	2615094
Filtered Splicing Events:	105717

Total splicing  Junctions:	508443
Known Splicing Junctions:	267528
Partial Novel Splicing Junctions:	149777
Novel Splicing Junctions:	91138

===================================================================
Create BED file ...
Create Interact file ...