Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/42/c4ff2c0236e18e4ebf7efec36953cc/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ba/12adb2358050df80794305114a7dfa/aih-tih-sc-63b0e7-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/42/c4ff2c0236e18e4ebf7efec36953cc/.command.run
==> STAGING COMPLETE (3 inputs)

PAIRED_END_BAM_INPUT
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paired = 291394025
unpaired = 5381724
MERGED PAIRED END READS = 291394025
MATES PROCESSED = 588169774
TOTAL READS     = 296775749
DISTINCT READS  = 1.38536e+08
DISTINCT COUNTS = 1219
MAX COUNT       = 1281067
COUNTS OF 1     = 7.67274e+07
MAX TERMS       = 100
OBSERVED COUNTS (1281068)
1	76727445
2	31502831
3	13906034
4	6633774
5	3435220
6	1929105
7	1162169
8	748909
9	510858
10	362212
11	266915
12	203648
13	159133
14	126460
15	103107
16	84942
17	71085
18	59778
19	50784
20	43869
21	37916
22	33187
23	29215
24	25917
25	22728
26	20587
27	18370
28	16896
29	14656
30	13682
31	12460
32	11503
33	10210
34	9537
35	8802
36	8092
37	7517
38	6926
39	6364
40	5883
41	5607
42	5163
43	4835
44	4467
45	4162
46	3907
47	3776
48	3448
49	3488
50	3272
51	3038
52	2816
53	2633
54	2505
55	2394
56	2303
57	2182
58	2088
59	1942
60	1835
61	1849
62	1799
63	1553
64	1622
65	1481
66	1470
67	1354
68	1324
69	1277
70	1255
71	1188
72	1067
73	1019
74	990
75	982
76	921
77	887
78	936
79	843
80	799
81	785
82	783
83	719
84	751
85	709
86	615
87	654
88	610
89	643
90	614
91	580
92	540
93	569
94	519
95	488
96	506
97	497
98	487
99	450
100	482
101	427
102	404
103	392
104	399
105	427
106	384
107	356
108	350
109	357
110	318
111	313
112	345
113	299
114	309
115	314
116	290
117	275
118	233
119	272
120	282
121	252
122	248
123	250
124	261
125	245
126	225
127	207
128	220
129	207
130	178
131	207
132	191
133	197
134	214
135	187
136	201
137	176
138	185
139	175
140	177
141	155
142	163
143	129
144	147
145	146
146	167
147	146
148	126
149	138
150	140
151	144
152	121
153	126
154	132
155	119
156	121
157	124
158	119
159	122
160	130
161	120
162	107
163	104
164	90
165	128
166	106
167	112
168	99
169	98
170	84
171	98
172	105
173	95
174	109
175	91
176	75
177	96
178	106
179	104
180	79
181	72
182	92
183	80
184	75
185	88
186	92
187	74
188	77
189	77
190	86
191	84
192	70
193	67
194	70
195	74
196	71
197	74
198	76
199	54
200	75
201	75
202	72
203	49
204	72
205	55
206	57
207	69
208	55
209	59
210	64
211	51
212	61
213	46
214	57
215	66
216	42
217	40
218	57
219	45
220	66
221	50
222	60
223	47
224	54
225	42
226	52
227	52
228	54
229	50
230	38
231	47
232	52
233	50
234	27
235	48
236	46
237	29
238	48
239	34
240	42
241	31
242	41
243	45
244	40
245	57
246	44
247	33
248	40
249	39
250	30
251	26
252	29
253	40
254	37
255	30
256	31
257	26
258	36
259	32
260	31
261	25
262	22
263	35
264	39
265	35
266	25
267	34
268	25
269	32
270	23
271	23
272	28
273	23
274	26
275	23
276	27
277	34
278	39
279	24
280	28
281	24
282	28
283	23
284	26
285	30
286	34
287	20
288	20
289	22
290	33
291	21
292	18
293	21
294	27
295	14
296	21
297	22
298	22
299	25
300	12
301	27
302	17
303	15
304	19
305	19
306	27
307	19
308	23
309	15
310	20
311	23
312	19
313	24
314	11
315	14
316	19
317	22
318	10
319	18
320	18
321	20
322	17
323	12
324	20
325	19
326	25
327	18
328	13
329	20
330	14
331	19
332	16
333	15
334	17
335	12
336	15
337	22
338	22
339	14
340	11
341	15
342	15
343	15
344	13
345	20
346	12
347	9
348	11
349	9
350	14
351	15
352	12
353	13
354	7
355	14
356	14
357	11
358	21
359	11
360	11
361	14
362	15
363	11
364	12
365	7
366	15
367	5
368	15
369	7
370	14
371	12
372	6
373	15
374	6
375	22
376	11
377	7
378	8
379	7
380	9
381	13
382	10
383	12
384	9
385	8
386	14
387	19
388	13
389	13
390	10
391	9
392	5
393	11
394	7
395	7
396	14
397	10
398	12
399	7
400	5
401	10
402	2
403	5
404	11
405	7
406	5
407	11
408	7
409	9
410	5
411	6
412	7
413	8
414	6
415	7
416	3
417	7
418	7
419	5
420	6
421	6
422	15
423	7
424	13
425	12
426	7
427	3
428	7
429	7
430	9
431	13
432	4
433	7
434	6
435	8
436	4
437	5
438	2
439	7
440	6
441	3
442	7
443	9
444	9
445	9
446	5
447	11
448	5
449	5
450	7
451	1
452	7
453	3
454	3
455	10
456	7
457	7
458	6
459	8
460	5
461	4
462	7
463	6
464	5
465	7
466	2
467	8
468	5
469	5
470	4
471	10
472	7
473	6
474	5
475	3
476	7
477	4
478	5
479	4
480	6
481	3
482	8
483	7
484	3
485	8
486	5
487	5
488	3
489	8
490	5
491	3
492	3
493	6
494	6
495	10
496	8
497	6
498	10
499	5
500	2
501	3
502	2
503	3
504	3
505	4
506	6
507	3
508	2
509	6
510	5
511	2
512	6
513	6
514	4
515	4
516	1
517	6
518	6
519	3
520	9
521	3
522	4
523	2
524	5
525	5
526	2
527	2
528	5
529	2
530	6
531	2
532	3
533	3
534	4
535	3
536	2
537	5
538	3
539	3
540	2
541	7
542	2
543	5
544	3
545	4
546	5
547	4
548	1
549	2
550	4
551	3
553	6
554	6
556	2
557	2
558	5
560	2
561	4
562	4
563	1
564	2
565	3
566	1
567	1
568	2
569	9
570	6
572	5
573	2
574	4
575	3
576	6
577	3
578	4
579	5
580	3
581	5
582	4
583	5
584	1
585	4
586	5
587	5
588	2
589	1
590	4
591	4
592	5
593	5
594	3
595	4
596	2
597	3
598	3
599	2
600	1
601	5
602	1
603	2
604	2
605	3
606	3
607	1
608	3
609	4
610	2
611	3
612	1
614	4
615	3
616	4
617	5
618	4
619	2
620	1
621	2
623	3
624	5
626	2
627	3
628	2
629	2
630	1
631	5
632	4
633	2
634	3
635	3
636	2
638	4
639	3
641	5
642	4
643	4
644	2
645	2
647	2
648	2
650	1
651	1
652	1
653	3
654	3
655	3
656	1
657	1
658	2
660	6
661	1
663	1
664	2
665	1
666	1
667	2
669	4
670	2
671	1
672	4
673	3
674	2
675	3
676	1
678	2
680	2
681	3
682	3
683	3
684	3
685	2
686	3
687	2
688	2
689	3
691	2
692	2
693	1
694	4
696	4
697	3
698	1
699	2
700	1
701	1
702	3
704	3
705	3
706	2
708	1
709	1
710	4
711	3
712	2
713	2
714	5
716	2
717	2
719	2
720	3
721	2
722	4
723	2
726	3
727	3
728	1
729	3
730	2
731	2
732	1
733	1
734	1
735	1
736	1
737	4
738	5
740	2
741	3
742	3
743	2
744	4
745	1
746	1
747	1
748	2
750	3
754	1
755	2
756	3
757	1
760	1
761	2
762	1
764	1
767	2
768	2
769	2
770	3
771	1
772	2
773	2
774	1
775	1
777	3
778	1
780	2
781	1
782	4
783	2
785	2
788	2
789	2
790	1
791	1
792	1
793	1
794	3
795	3
796	1
797	2
799	2
800	2
801	3
802	1
803	2
804	2
805	2
806	2
807	1
808	1
809	1
810	2
811	1
812	1
814	2
815	1
817	2
818	2
819	1
820	1
821	2
822	1
825	2
826	2
827	1
828	2
829	5
831	3
832	1
833	2
834	1
835	3
836	1
839	3
840	2
842	2
844	1
845	1
846	1
851	1
855	1
857	1
861	2
865	1
866	1
867	2
870	2
871	2
872	2
873	3
875	1
876	1
878	2
879	1
881	1
882	1
883	1
884	3
885	2
887	2
889	1
890	2
894	1
895	2
898	2
899	1
904	1
908	1
909	2
910	1
912	2
913	2
914	1
915	1
916	1
917	1
918	1
919	1
920	2
921	1
922	1
923	1
926	1
927	2
929	3
930	2
932	1
934	1
935	1
937	1
938	1
940	1
943	1
944	1
945	2
947	1
949	2
950	3
951	1
952	2
958	1
959	1
961	1
964	2
969	2
971	1
973	1
974	2
977	1
979	3
981	2
982	1
983	1
988	2
989	1
990	1
994	1
997	1
1000	2
1004	2
1006	1
1007	3
1011	1
1012	1
1013	1
1014	1
1015	1
1016	2
1019	1
1022	1
1027	2
1031	1
1036	1
1037	2
1038	1
1039	1
1041	1
1042	1
1043	1
1046	2
1047	3
1052	1
1053	1
1054	1
1056	1
1059	1
1060	1
1064	1
1066	2
1067	1
1069	1
1072	1
1076	2
1079	1
1080	1
1084	2
1085	1
1088	1
1089	1
1093	1
1096	1
1099	1
1100	2
1102	1
1105	1
1106	1
1107	2
1110	1
1115	1
1118	1
1119	2
1123	1
1124	1
1125	2
1131	1
1132	1
1133	2
1135	1
1136	1
1142	1
1143	1
1145	1
1147	1
1155	1
1160	1
1161	1
1165	1
1166	1
1170	1
1171	2
1172	1
1181	1
1182	2
1183	1
1187	1
1189	1
1190	1
1193	1
1196	1
1198	2
1201	2
1203	1
1205	1
1207	1
1209	1
1221	1
1223	1
1224	1
1230	1
1234	1
1235	1
1236	1
1238	1
1240	1
1241	1
1243	1
1245	1
1246	1
1247	1
1249	2
1253	1
1258	1
1260	1
1261	2
1262	2
1267	1
1271	2
1275	1
1281	1
1282	1
1284	1
1285	2
1286	2
1294	1
1295	1
1301	1
1302	1
1304	2
1311	2
1314	1
1315	1
1319	1
1324	1
1326	1
1332	1
1339	1
1344	1
1349	1
1350	1
1355	1
1358	1
1373	1
1376	1
1378	1
1379	1
1382	1
1385	1
1386	1
1396	1
1405	1
1411	1
1422	1
1424	1
1431	1
1432	2
1439	1
1444	1
1447	1
1450	1
1454	1
1456	1
1457	1
1459	1
1467	1
1470	1
1480	1
1482	1
1483	1
1485	2
1486	1
1495	1
1499	1
1501	1
1503	1
1510	1
1511	1
1513	1
1528	1
1546	1
1559	1
1566	1
1572	1
1575	1
1579	1
1595	1
1598	1
1609	1
1616	1
1618	1
1620	1
1623	1
1639	1
1652	1
1659	1
1660	1
1665	1
1672	1
1674	1
1676	1
1681	1
1706	1
1713	1
1717	1
1755	1
1762	2
1769	1
1775	1
1777	2
1780	1
1782	1
1787	1
1790	1
1791	1
1795	1
1803	1
1804	1
1815	1
1819	1
1826	1
1836	1
1842	1
1843	1
1845	1
1851	1
1853	1
1873	1
1882	1
1885	2
1891	1
1898	1
1909	1
1911	1
1913	1
1914	1
1946	1
1951	1
1962	1
1965	1
1969	1
1984	1
1990	1
1996	1
1997	1
2001	1
2003	1
2006	1
2013	1
2015	1
2033	1
2046	1
2052	1
2054	1
2059	1
2064	1
2090	1
2134	1
2141	1
2148	1
2150	1
2160	1
2161	1
2168	1
2172	1
2173	2
2179	1
2184	1
2190	1
2199	1
2200	1
2207	1
2209	1
2213	1
2224	1
2231	1
2254	1
2256	1
2266	1
2275	1
2278	1
2286	1
2290	1
2308	1
2331	1
2342	1
2357	1
2364	1
2379	1
2407	1
2415	1
2424	1
2425	1
2435	1
2443	1
2493	1
2494	1
2547	1
2551	1
2556	1
2563	1
2602	1
2620	1
2626	1
2721	1
2738	1
2742	1
2793	1
2840	1
2856	2
2921	1
2982	1
2996	1
3033	1
3034	1
3071	1
3116	1
3142	1
3176	1
3188	1
3213	1
3302	1
3306	1
3326	1
3403	1
3470	1
3540	1
3578	1
3579	1
3614	1
3618	1
3737	1
3768	1
4000	1
4151	1
4344	1
4443	1
4507	1
4679	1
4866	1
4912	1
5382	1
5409	1
5786	1
8566	1
8873	1
11376	1
11966	1
12560	1
12856	1
16496	1
57236	1
1281067	1

[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
._.._._..._.......__......_._._.