AIH curated blacklist: matched 13 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 230
Pass (FILTER=PASS): 38 (16.5%)
Fail (FILTER=FAIL): 192 (83.5%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 13
All 13 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 64
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 27
confidence_below_min(low<high): 21
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 7
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0);aih_curated_blacklist: 2
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
Breakdown by confidence:
high: 38 pass, 2 fail (total: 40)
low: 0 pass, 95 fail (total: 95)
medium: 0 pass, 95 fail (total: 95)
Arriba filter: 230 rows -> 38 PASS; wrote aih-tih-sc-c7b68f-R1_B23WHYVLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-c7b68f-R1_B23WHYVLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-c7b68f-R1_B23WHYVLT4_1.arriba.fusions.filter_summary.txt