File Info

Filename
aih-tih-sc-0fc41c-R1_B23WHYVLT4_1.Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9e/4ea539895f224e1427a94ee0e8d7a2/aih-tih-sc-0fc41c-R1_B23WHYVLT4_1.Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 07:35:56
                             Started mapping on |	Jun 08 07:37:42
                                    Finished on |	Jun 08 08:37:48
       Mapping speed, Million of reads per hour |	224.87

                          Number of input reads |	225243059
                      Average input read length |	245
                                    UNIQUE READS:
                   Uniquely mapped reads number |	212226478
                        Uniquely mapped reads % |	94.22%
                          Average mapped length |	245.67
                       Number of splices: Total |	218492282
            Number of splices: Annotated (sjdb) |	214914115
                       Number of splices: GT/AG |	216092536
                       Number of splices: GC/AG |	1741228
                       Number of splices: AT/AC |	202024
               Number of splices: Non-canonical |	456494
                      Mismatch rate per base, % |	0.25%
                         Deletion rate per base |	0.01%
                        Deletion average length |	1.04
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.65
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	8168117
             % of reads mapped to multiple loci |	3.63%
        Number of reads mapped to too many loci |	428871
             % of reads mapped to too many loci |	0.19%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	537559
       % of reads unmapped: too many mismatches |	0.24%
            Number of reads unmapped: too short |	2239791
                 % of reads unmapped: too short |	0.99%
                Number of reads unmapped: other |	364884
                     % of reads unmapped: other |	0.16%
                                  CHIMERIC READS:
                       Number of chimeric reads |	2888424
                            % of chimeric reads |	1.28%