AIH curated blacklist: matched 12 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 253
Pass (FILTER=PASS): 24 (9.5%)
Fail (FILTER=FAIL): 229 (90.5%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 12
All 12 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 85
confidence_below_min(low<high): 29
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 24
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 3
Breakdown by confidence:
high: 24 pass, 2 fail (total: 26)
low: 0 pass, 103 fail (total: 103)
medium: 0 pass, 124 fail (total: 124)
Arriba filter: 253 rows -> 24 PASS; wrote aih-tih-sc-4f4d6e-R1_B23WHYVLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-4f4d6e-R1_B23WHYVLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-4f4d6e-R1_B23WHYVLT4_1.arriba.fusions.filter_summary.txt