AIH curated blacklist: matched 12 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 266
Pass (FILTER=PASS): 41 (15.4%)
Fail (FILTER=FAIL): 225 (84.6%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 12
All 12 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 68
confidence_below_min(low<high): 29
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 26
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 21
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 2
Breakdown by confidence:
high: 41 pass, 4 fail (total: 45)
low: 0 pass, 119 fail (total: 119)
medium: 0 pass, 102 fail (total: 102)
Arriba filter: 266 rows -> 41 PASS; wrote aih-tih-sc-934f55-R1_B23WHYVLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-934f55-R1_B23WHYVLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-934f55-R1_B23WHYVLT4_1.arriba.fusions.filter_summary.txt