.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (aih-tih-sc-f4e5c4-R1_B23WHYVLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9a/bd11f3d748c9489e6a535c05564bd0/.command.log
Size: 72.1 KB
Task: NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (aih-tih-sc-f4e5c4-R1_B23WHYVLT4_1)
Attempt
Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cf/6ba786d91f09efbd691b91f9d25f6c/aih-tih-sc-f4e5c4-R1_B23WHYVLT4_1.Chimeric.out.junction
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9a/bd11f3d748c9489e6a535c05564bd0/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9a/bd11f3d748c9489e6a535c05564bd0/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/56/c64f9385454ba9dcf8fdd0adcd1351/aih-tih-sc-f4e5c4-R1_B23WHYVLT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/56/c64f9385454ba9dcf8fdd0adcd1351/aih-tih-sc-f4e5c4-R1_B23WHYVLT4_1_2.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.SJCAxqNKsu/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary
-sample contains 167289700 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir  -J /tmp/nxf.SJCAxqNKsu/aih-tih-sc-f4e5c4-R1_B23WHYVLT4_1.Chimeric.out.junction  -O /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.SJCAxqNKsu/aih-tih-sc-f4e5c4-R1_B23WHYVLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.05 min).
-mapping reads to genes

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[1810000], rate=51469.19/min -building interval tree based on /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[1810000], rate=51396.12/min -building interval tree based on /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.05 min).
-mapping reads to genes

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[1660000], rate=50353.89/min 
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[1680000], rate=49975.21/min 
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[1700000], rate=50122.85/min 
[1710000], rate=50269.48/min 
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[1740000], rate=49198.87/min 
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[1770000], rate=48010.85/min 
[1780000], rate=47785.23/min 
[1790000], rate=47669.77/min 
[1800000], rate=47556.14/min -building interval tree based on /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.05 min).
-mapping reads to genes

[10000], rate=150000.00/min 
[20000], rate=150000.00/min 
[30000], rate=112500.00/min 
[40000], rate=126315.79/min 
[50000], rate=130434.78/min 
[60000], rate=133333.33/min 
[70000], rate=144827.59/min 
[80000], rate=145454.55/min 
[90000], rate=150000.00/min 
[100000], rate=153846.15/min 
[110000], rate=160975.61/min 
[120000], rate=160000.00/min 
[130000], rate=159183.67/min 
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[440000], rate=160975.61/min 
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[470000], rate=125892.86/min 
[480000], rate=115662.65/min 
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[520000], rate=86426.59/min 
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[800000], rate=46601.94/min 
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[1410000], rate=41964.29/min 
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[1450000], rate=40902.68/min 
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[1470000], rate=41099.72/min 
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[1500000], rate=41474.65/min 
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[1520000], rate=41192.41/min 
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[1540000], rate=40903.05/min 
[1550000], rate=40120.79/min 
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[1700000], rate=38389.16/min 
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[1780000], rate=38779.96/min 
[1790000], rate=38898.95/min 
[1800000], rate=39003.25/min 
[1810000], rate=39135.14/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
 12000000.00 reads per min processed...  
 18000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 7500000.00 reads per min processed...  
 7200000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 5500000.00 reads per min processed...  
 5538461.54 reads per min processed...  
 5200000.00 reads per min processed...  
 4941176.47 reads per min processed...  
 5000000.00 reads per min processed...  
 5052631.58 reads per min processed...  
 4857142.86 reads per min processed...  
 4695652.17 reads per min processed...  
 4560000.00 reads per min processed...  
 4444444.44 reads per min processed...  
 4344827.59 reads per min processed...  
 4258064.52 reads per min processed...  
 4181818.18 reads per min processed...  
 4114285.71 reads per min processed...  
 4166666.67 reads per min processed...  
 4105263.16 reads per min processed...  
 4050000.00 reads per min processed...  
 4097560.98 reads per min processed...  
 4046511.63 reads per min processed...  
 4090909.09 reads per min processed...  
 4133333.33 reads per min processed...  
 4173913.04 reads per min processed...  
 4125000.00 reads per min processed...  
 4080000.00 reads per min processed...  
 4038461.54 reads per min processed...  
 4075471.70 reads per min processed...  
 4111111.11 reads per min processed...  
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 4254545.45 reads per min processed...  
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 4241379.31 reads per min processed...  
 4271186.44 reads per min processed...  
 4229508.20 reads per min processed...  
 4258064.52 reads per min processed...  
 4218750.00 reads per min processed...  
 4246153.85 reads per min processed...  
 4208955.22 reads per min processed...  
 4235294.12 reads per min processed...  
 4200000.00 reads per min processed...  
 4225352.11 reads per min processed...  
 4191780.82 reads per min processed...  
 4160000.00 reads per min processed...  
 4184210.53 reads per min processed...  
 4207792.21 reads per min processed...  
 4177215.19 reads per min processed...  
 4200000.00 reads per min processed...  
 4222222.22 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.SJCAxqNKsu/aih-tih-sc-f4e5c4-R1_B23WHYVLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -203630.995028
EM: Round [1] log likelihood: -203494.061187
EM: Round [2] log likelihood: -203440.923517
EM: Round [3] log likelihood: -203415.390029
EM: Round [4] log likelihood: -203401.715067
EM: Round [5] log likelihood: -203393.861033
EM: Round [6] log likelihood: -203389.093932
EM: Round [7] log likelihood: -203386.056495
EM: Round [8] log likelihood: -203384.035173
EM: Round [9] log likelihood: -203382.637278
EM: Round [10] log likelihood: -203381.637418
EM: Round [11] log likelihood: -203380.900977
EM: Round [12] log likelihood: -203380.344504
EM: Round [13] log likelihood: -203379.914475
EM: Round [14] log likelihood: -203379.575488
EM: Round [15] log likelihood: -203379.303483
EM: Round [16] log likelihood: -203379.081712
EM: Round [17] log likelihood: -203378.898272
EM: Round [18] log likelihood: -203378.744544
EM: Round [19] log likelihood: -203378.614183
EM: Round [20] log likelihood: -203378.502450
EM: Round [21] log likelihood: -203378.405757
EM: Round [22] log likelihood: -203378.321350
EM: Round [23] log likelihood: -203378.247094
EM: Round [24] log likelihood: -203378.181311
EM: Round [25] log likelihood: -203378.122668
EM: Round [26] log likelihood: -203378.070099
EM: Round [27] log likelihood: -203378.022738
EM: Round [28] log likelihood: -203377.979877
EM: Round [29] log likelihood: -203377.940932
EM: Round [30] log likelihood: -203377.905417
EM: Round [31] log likelihood: -203377.872923
EM: Round [32] log likelihood: -203377.843104
EM: Round [33] log likelihood: -203377.815667
EM: Round [34] log likelihood: -203377.790359
EM: Round [35] log likelihood: -203377.766961
EM: Round [36] log likelihood: -203377.745286
EM: Round [37] log likelihood: -203377.725167
EM: Round [38] log likelihood: -203377.706461
EM: Round [39] log likelihood: -203377.689039
EM: Round [40] log likelihood: -203377.672788
EM: Round [41] log likelihood: -203377.657609
EM: Round [42] log likelihood: -203377.643413
EM: Round [43] log likelihood: -203377.630118
EM: Round [44] log likelihood: -203377.617654
EM: Round [45] log likelihood: -203377.605955
EM: Round [46] log likelihood: -203377.594965
EM: Round [47] log likelihood: -203377.584629
EM: Round [48] log likelihood: -203377.574900
EM: Round [49] log likelihood: -203377.565736
EM: Round [50] log likelihood: -203377.557095
EM: Round [51] log likelihood: -203377.548943
EM: Round [52] log likelihood: -203377.541245
EM: Round [53] log likelihood: -203377.533972
EM: Round [54] log likelihood: -203377.527096
EM: Round [55] log likelihood: -203377.520591
EM: Round [56] log likelihood: -203377.514434
EM: Round [57] log likelihood: -203377.508603
EM: Round [58] log likelihood: -203377.503078
EM: Round [59] log likelihood: -203377.497840
EM: Round [60] log likelihood: -203377.492872
EM: Round [61] log likelihood: -203377.488159
EM: Round [62] log likelihood: -203377.483684
EM: Round [63] log likelihood: -203377.479435
EM: Round [64] log likelihood: -203377.475398
EM: Round [65] log likelihood: -203377.471561
EM: Round [66] log likelihood: -203377.467914
EM: Round [67] log likelihood: -203377.464446
EM: Round [68] log likelihood: -203377.461147
EM: Round [69] log likelihood: -203377.458008
EM: Round [70] log likelihood: -203377.455020
EM: Round [71] log likelihood: -203377.452175
EM: Round [72] log likelihood: -203377.449466
EM: Round [73] log likelihood: -203377.446885
EM: Round [74] log likelihood: -203377.444426
EM: Round [75] log likelihood: -203377.442083
EM: Round [76] log likelihood: -203377.439850
EM: Round [77] log likelihood: -203377.437720
EM: Round [78] log likelihood: -203377.435690
EM: Round [79] log likelihood: -203377.433753
EM: Round [80] log likelihood: -203377.431906
EM: Round [81] log likelihood: -203377.430143
EM: Round [82] log likelihood: -203377.428461
EM: Round [83] log likelihood: -203377.426856
EM: Round [84] log likelihood: -203377.425324
EM: Round [85] log likelihood: -203377.423861
EM: Round [86] log likelihood: -203377.422464
EM: Round [87] log likelihood: -203377.421130
EM: Round [88] log likelihood: -203377.419855
EM: Round [89] log likelihood: -203377.418638
EM: Round [90] log likelihood: -203377.417475
EM: Round [91] log likelihood: -203377.416364
EM: Round [92] log likelihood: -203377.415303
EM: Round [93] log likelihood: -203377.414288
EM: Round [94] log likelihood: -203377.413318
EM: Round [95] log likelihood: -203377.412391
EM: Round [96] log likelihood: -203377.411504
EM: Round [97] log likelihood: -203377.410657
EM: Round [98] log likelihood: -203377.409846
EM: Round [99] log likelihood: -203377.409071
EM: Round [100] log likelihood: -203377.408330
EM: Round [101] log likelihood: -203377.407621
EM: Round [102] log likelihood: -203377.406943
EM: Round [103] log likelihood: -203377.406294
EM: Round [104] log likelihood: -203377.405673
EM: Round [105] log likelihood: -203377.405078
EM: Round [106] log likelihood: -203377.404510
EM: Round [107] log likelihood: -203377.403966
EM: Round [108] log likelihood: -203377.403445
EM: Round [109] log likelihood: -203377.402946
EM: Round [110] log likelihood: -203377.402469
EM: Round [111] log likelihood: -203377.402012
EM: Round [112] log likelihood: -203377.401574
EM: Round [113] log likelihood: -203377.401155
EM: Round [114] log likelihood: -203377.400753
EM: Round [115] log likelihood: -203377.400369
EM: Round [116] log likelihood: -203377.400001
EM: Round [117] log likelihood: -203377.399648
EM: Round [118] log likelihood: -203377.399310
EM: Round [119] log likelihood: -203377.398987
EM: Round [120] log likelihood: -203377.398677
EM: Round [121] log likelihood: -203377.398379
EM: Round [122] log likelihood: -203377.398095
EM: Round [123] log likelihood: -203377.397822
EM: Round [124] log likelihood: -203377.397560
EM: Round [125] log likelihood: -203377.397309
EM: Round [126] log likelihood: -203377.397069
EM: Round [127] log likelihood: -203377.396839
EM: Round [128] log likelihood: -203377.396618
EM: Round [129] log likelihood: -203377.396406
EM: Round [130] log likelihood: -203377.396203
EM: Round [131] log likelihood: -203377.396008
EM: Round [132] log likelihood: -203377.395821
EM: Round [133] log likelihood: -203377.395642
EM: Round [134] log likelihood: -203377.395470
EM: Round [135] log likelihood: -203377.395305
EM: Round [136] log likelihood: -203377.395147
EM: Round [137] log likelihood: -203377.394995
EM: Round [138] log likelihood: -203377.394849
EM: Round [139] log likelihood: -203377.394709
EM: Round [140] log likelihood: -203377.394575
EM: Round [141] log likelihood: -203377.394446
EM: Round [142] log likelihood: -203377.394323
EM: Round [143] log likelihood: -203377.394204
EM: Round [144] log likelihood: -203377.394090
EM: Round [145] log likelihood: -203377.393981
EM: Round [146] log likelihood: -203377.393875
EM: Round [147] log likelihood: -203377.393775
EM: Round [148] log likelihood: -203377.393678
EM: Stopping iterations at round 148 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -203385.946680
EM: Round [1] log likelihood: -203277.089693
EM: Round [2] log likelihood: -203235.786380
EM: Round [3] log likelihood: -203216.299438
EM: Round [4] log likelihood: -203205.967681
EM: Round [5] log likelihood: -203200.046679
EM: Round [6] log likelihood: -203196.437910
EM: Round [7] log likelihood: -203194.118997
EM: Round [8] log likelihood: -203192.558642
EM: Round [9] log likelihood: -203191.465962
EM: Round [10] log likelihood: -203190.674074
EM: Round [11] log likelihood: -203190.083016
EM: Round [12] log likelihood: -203189.630504
EM: Round [13] log likelihood: -203189.276321
EM: Round [14] log likelihood: -203188.993668
EM: Round [15] log likelihood: -203188.764182
EM: Round [16] log likelihood: -203188.574974
EM: Round [17] log likelihood: -203188.416806
EM: Round [18] log likelihood: -203188.282933
EM: Round [19] log likelihood: -203188.168349
EM: Round [20] log likelihood: -203188.069286
EM: Round [21] log likelihood: -203187.982865
EM: Round [22] log likelihood: -203187.906863
EM: Round [23] log likelihood: -203187.839540
EM: Round [24] log likelihood: -203187.779519
EM: Round [25] log likelihood: -203187.725701
EM: Round [26] log likelihood: -203187.677197
EM: Round [27] log likelihood: -203187.633281
EM: Round [28] log likelihood: -203187.593357
EM: Round [29] log likelihood: -203187.556929
EM: Round [30] log likelihood: -203187.523580
EM: Round [31] log likelihood: -203187.492959
EM: Round [32] log likelihood: -203187.464767
EM: Round [33] log likelihood: -203187.438748
EM: Round [34] log likelihood: -203187.414681
EM: Round [35] log likelihood: -203187.392375
EM: Round [36] log likelihood: -203187.371661
EM: Round [37] log likelihood: -203187.352392
EM: Round [38] log likelihood: -203187.334440
EM: Round [39] log likelihood: -203187.317690
EM: Round [40] log likelihood: -203187.302039
EM: Round [41] log likelihood: -203187.287398
EM: Round [42] log likelihood: -203187.273683
EM: Round [43] log likelihood: -203187.260823
EM: Round [44] log likelihood: -203187.248751
EM: Round [45] log likelihood: -203187.237408
EM: Round [46] log likelihood: -203187.226740
EM: Round [47] log likelihood: -203187.216698
EM: Round [48] log likelihood: -203187.207238
EM: Round [49] log likelihood: -203187.198318
EM: Round [50] log likelihood: -203187.189902
EM: Round [51] log likelihood: -203187.181956
EM: Round [52] log likelihood: -203187.174448
EM: Round [53] log likelihood: -203187.167350
EM: Round [54] log likelihood: -203187.160636
EM: Round [55] log likelihood: -203187.154281
EM: Round [56] log likelihood: -203187.148263
EM: Round [57] log likelihood: -203187.142560
EM: Round [58] log likelihood: -203187.137155
EM: Round [59] log likelihood: -203187.132028
EM: Round [60] log likelihood: -203187.127164
EM: Round [61] log likelihood: -203187.122547
EM: Round [62] log likelihood: -203187.118163
EM: Round [63] log likelihood: -203187.113999
EM: Round [64] log likelihood: -203187.110041
EM: Round [65] log likelihood: -203187.106280
EM: Round [66] log likelihood: -203187.102702
EM: Round [67] log likelihood: -203187.099300
EM: Round [68] log likelihood: -203187.096062
EM: Round [69] log likelihood: -203187.092981
EM: Round [70] log likelihood: -203187.090047
EM: Round [71] log likelihood: -203187.087253
EM: Round [72] log likelihood: -203187.084592
EM: Round [73] log likelihood: -203187.082057
EM: Round [74] log likelihood: -203187.079642
EM: Round [75] log likelihood: -203187.077339
EM: Round [76] log likelihood: -203187.075144
EM: Round [77] log likelihood: -203187.073050
EM: Round [78] log likelihood: -203187.071054
EM: Round [79] log likelihood: -203187.069149
EM: Round [80] log likelihood: -203187.067332
EM: Round [81] log likelihood: -203187.065599
EM: Round [82] log likelihood: -203187.063944
EM: Round [83] log likelihood: -203187.062364
EM: Round [84] log likelihood: -203187.060856
EM: Round [85] log likelihood: -203187.059416
EM: Round [86] log likelihood: -203187.058041
EM: Round [87] log likelihood: -203187.056727
EM: Round [88] log likelihood: -203187.055473
EM: Round [89] log likelihood: -203187.054274
EM: Round [90] log likelihood: -203187.053129
EM: Round [91] log likelihood: -203187.052034
EM: Round [92] log likelihood: -203187.050988
EM: Round [93] log likelihood: -203187.049988
EM: Round [94] log likelihood: -203187.049032
EM: Round [95] log likelihood: -203187.048118
EM: Round [96] log likelihood: -203187.047245
EM: Round [97] log likelihood: -203187.046409
EM: Round [98] log likelihood: -203187.045610
EM: Round [99] log likelihood: -203187.044845
EM: Round [100] log likelihood: -203187.044114
EM: Round [101] log likelihood: -203187.043415
EM: Round [102] log likelihood: -203187.042745
EM: Round [103] log likelihood: -203187.042105
EM: Round [104] log likelihood: -203187.041492
EM: Round [105] log likelihood: -203187.040906
EM: Round [106] log likelihood: -203187.040345
EM: Round [107] log likelihood: -203187.039807
EM: Round [108] log likelihood: -203187.039293
EM: Round [109] log likelihood: -203187.038801
EM: Round [110] log likelihood: -203187.038329
EM: Round [111] log likelihood: -203187.037878
EM: Round [112] log likelihood: -203187.037445
EM: Round [113] log likelihood: -203187.037031
EM: Round [114] log likelihood: -203187.036635
EM: Round [115] log likelihood: -203187.036255
EM: Round [116] log likelihood: -203187.035891
EM: Round [117] log likelihood: -203187.035542
EM: Round [118] log likelihood: -203187.035209
EM: Round [119] log likelihood: -203187.034889
EM: Round [120] log likelihood: -203187.034582
EM: Round [121] log likelihood: -203187.034288
EM: Round [122] log likelihood: -203187.034006
EM: Round [123] log likelihood: -203187.033736
EM: Round [124] log likelihood: -203187.033478
EM: Round [125] log likelihood: -203187.033229
EM: Round [126] log likelihood: -203187.032992
EM: Round [127] log likelihood: -203187.032764
EM: Round [128] log likelihood: -203187.032545
EM: Round [129] log likelihood: -203187.032335
EM: Round [130] log likelihood: -203187.032134
EM: Round [131] log likelihood: -203187.031941
EM: Round [132] log likelihood: -203187.031756
EM: Round [133] log likelihood: -203187.031579
EM: Round [134] log likelihood: -203187.031408
EM: Round [135] log likelihood: -203187.031245
EM: Round [136] log likelihood: -203187.031088
EM: Round [137] log likelihood: -203187.030938
EM: Round [138] log likelihood: -203187.030793
EM: Round [139] log likelihood: -203187.030655
EM: Round [140] log likelihood: -203187.030522
EM: Round [141] log likelihood: -203187.030394
EM: Round [142] log likelihood: -203187.030272
EM: Round [143] log likelihood: -203187.030154
EM: Round [144] log likelihood: -203187.030041
EM: Round [145] log likelihood: -203187.029932
EM: Round [146] log likelihood: -203187.029828
EM: Round [147] log likelihood: -203187.029728
EM: Round [148] log likelihood: -203187.029632
EM: Stopping iterations at round 148 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 167289700 > /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir > /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir --annotate /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir
-done, see /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1815, filtered: 10853)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGL.g@-ext]
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WARNING, no entry stored in dbm for [IGL.g@-ext]
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WARNING, no entry stored in dbm for [IGL.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000250320.6]
WARNING, no entry stored in dbm for [ENSG00000237773.7]
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WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000282885.2]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
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WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000227270.1]
WARNING, no entry stored in dbm for [ENSG00000237666.2]
WARNING, no entry stored in dbm for [ENSG00000267321.3]
WARNING, no entry stored in dbm for [ENSG00000233963.2]
WARNING, no entry stored in dbm for [ENSG00000237004.4]
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WARNING, no entry stored in dbm for [ENSG00000227671.4]
WARNING, no entry stored in dbm for [ENSG00000233527.9]
WARNING, no entry stored in dbm for [ENSG00000267871.6]
WARNING, no entry stored in dbm for [ENSG00000248406.1]
WARNING, no entry stored in dbm for [ENSG00000233987.2]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000214176.9]
WARNING, no entry stored in dbm for [ENSG00000286562.1]
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WARNING, no entry stored in dbm for [ENSG00000232346.1]
WARNING, no entry stored in dbm for [ENSG00000243287.2]
WARNING, no entry stored in dbm for [ENSG00000267767.3]
WARNING, no entry stored in dbm for [ENSG00000229386.3]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000219703.1]
WARNING, no entry stored in dbm for [ENSG00000250358.6]
WARNING, no entry stored in dbm for [ENSG00000262539.1]
WARNING, no entry stored in dbm for [ENSG00000228065.11]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000276563.1]
WARNING, no entry stored in dbm for [ENSG00000241656.1]
WARNING, no entry stored in dbm for [ENSG00000263563.6]
WARNING, no entry stored in dbm for [ENSG00000235782.1]
WARNING, no entry stored in dbm for [ENSG00000283480.1]
WARNING, no entry stored in dbm for [ENSG00000218274.2]
WARNING, no entry stored in dbm for [ENSG00000180438.15]
WARNING, no entry stored in dbm for [ENSG00000224401.2]
WARNING, no entry stored in dbm for [ENSG00000213650.3]
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WARNING, no entry stored in dbm for [ENSG00000259737.7]
WARNING, no entry stored in dbm for [ENSG00000228414.7]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
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WARNING, no entry stored in dbm for [ENSG00000270791.1]
WARNING, no entry stored in dbm for [ENSG00000266433.6]
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WARNING, no entry stored in dbm for [ENSG00000242207.1]
WARNING, no entry stored in dbm for [ENSG00000263934.5]
WARNING, no entry stored in dbm for [ENSG00000204387.14]
WARNING, no entry stored in dbm for [ENSG00000228649.9]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000270344.3]
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WARNING, no entry stored in dbm for [ENSG00000225138.8]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
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WARNING, no entry stored in dbm for [ENSG00000204054.14]
WARNING, no entry stored in dbm for [ENSG00000227769.7]
WARNING, no entry stored in dbm for [ENSG00000269900.3]
WARNING, no entry stored in dbm for [ENSG00000182048.11]
WARNING, no entry stored in dbm for [ENSG00000232748.3]
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WARNING, no entry stored in dbm for [ENSG00000250813.1]
WARNING, no entry stored in dbm for [ENSG00000253541.1]
WARNING, no entry stored in dbm for [ENSG00000260487.1]
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WARNING, no entry stored in dbm for [ENSG00000247708.8]
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WARNING, no entry stored in dbm for [ENSG00000233778.3]
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WARNING, no entry stored in dbm for [ENSG00000261051.1]
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WARNING, no entry stored in dbm for [ENSG00000237000.1]
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WARNING, no entry stored in dbm for [ENSG00000236051.7]
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WARNING, no entry stored in dbm for [ENSG00000210127.1]
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WARNING, no entry stored in dbm for [ENSG00000249328.3]
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WARNING, no entry stored in dbm for [ENSG00000205611.5]
WARNING, no entry stored in dbm for [ENSG00000224020.1]
WARNING, no entry stored in dbm for [ENSG00000272690.6]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000214548.18]
WARNING, no entry stored in dbm for [ENSG00000214548.18]
WARNING, no entry stored in dbm for [ENSG00000248309.7]
WARNING, no entry stored in dbm for [ENSG00000242326.1]
WARNING, no entry stored in dbm for [ENSG00000244313.3]
WARNING, no entry stored in dbm for [ENSG00000283132.1]
WARNING, no entry stored in dbm for [ENSG00000224186.8]
WARNING, no entry stored in dbm for [ENSG00000286596.1]
WARNING, no entry stored in dbm for [ENSG00000286295.1]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000231964.1]
WARNING, no entry stored in dbm for [ENSG00000250754.6]
WARNING, no entry stored in dbm for [ENSG00000206187.4]
WARNING, no entry stored in dbm for [ENSG00000281903.2]
WARNING, no entry stored in dbm for [ENSG00000250125.4]
WARNING, no entry stored in dbm for [ENSG00000224153.3]
WARNING, no entry stored in dbm for [ENSG00000262188.2]
WARNING, no entry stored in dbm for [ENSG00000235493.2]
WARNING, no entry stored in dbm for [ENSG00000279579.3]
WARNING, no entry stored in dbm for [ENSG00000260976.2]
WARNING, no entry stored in dbm for [ENSG00000198685.4]
WARNING, no entry stored in dbm for [ENSG00000198685.4]
WARNING, no entry stored in dbm for [ENSG00000247213.7]
WARNING, no entry stored in dbm for [ENSG00000260468.1]
WARNING, no entry stored in dbm for [ENSG00000247157.7]
WARNING, no entry stored in dbm for [ENSG00000245937.8]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000232677.9]
WARNING, no entry stored in dbm for [ENSG00000258279.4]
WARNING, no entry stored in dbm for [ENSG00000175611.12]
WARNING, no entry stored in dbm for [ENSG00000180229.12]
WARNING, no entry stored in dbm for [ENSG00000179406.8]
WARNING, no entry stored in dbm for [ENSG00000237854.3]
WARNING, no entry stored in dbm for [ENSG00000233008.6]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000239569.3]
WARNING, no entry stored in dbm for [ENSG00000217648.1]
WARNING, no entry stored in dbm for [ENSG00000224717.1]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000232788.1]
WARNING, no entry stored in dbm for [ENSG00000283923.1]
WARNING, no entry stored in dbm for [ENSG00000259673.6]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000197301.7]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000234945.8]
WARNING, no entry stored in dbm for [ENSG00000226002.1]
WARNING, no entry stored in dbm for [ENSG00000227113.2]
WARNING, no entry stored in dbm for [ENSG00000218803.1]
WARNING, no entry stored in dbm for [ENSG00000251022.6]
WARNING, no entry stored in dbm for [ENSG00000257621.8]
WARNING, no entry stored in dbm for [ENSG00000250959.2]
WARNING, no entry stored in dbm for [ENSG00000237125.11]
WARNING, no entry stored in dbm for [ENSG00000163597.15]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000275906.1]
WARNING, no entry stored in dbm for [ENSG00000254932.2]
WARNING, no entry stored in dbm for [ENSG00000237424.1]
WARNING, no entry stored in dbm for [ENSG00000284699.1]
WARNING, no entry stored in dbm for [ENSG00000204091.8]
WARNING, no entry stored in dbm for [ENSG00000225969.2]
WARNING, no entry stored in dbm for [ENSG00000274265.5]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000205890.3]
WARNING, no entry stored in dbm for [ENSG00000224722.3]
WARNING, no entry stored in dbm for [ENSG00000264044.1]
WARNING, no entry stored in dbm for [ENSG00000234690.7]
WARNING, no entry stored in dbm for [ENSG00000237505.8]
WARNING, no entry stored in dbm for [ENSG00000234152.1]
WARNING, no entry stored in dbm for [ENSG00000273301.1]
WARNING, no entry stored in dbm for [ENSG00000224775.2]
WARNING, no entry stored in dbm for [ENSG00000257790.1]
WARNING, no entry stored in dbm for [ENSG00000231018.1]
WARNING, no entry stored in dbm for [ENSG00000179523.5]
WARNING, no entry stored in dbm for [ENSG00000238755.3]
WARNING, no entry stored in dbm for [ENSG00000276710.4]
WARNING, no entry stored in dbm for [ENSG00000238171.1]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000261279.5]
WARNING, no entry stored in dbm for [ENSG00000233110.1]
WARNING, no entry stored in dbm for [ENSG00000232354.8]
WARNING, no entry stored in dbm for [ENSG00000237372.4]
WARNING, no entry stored in dbm for [ENSG00000271162.1]
WARNING, no entry stored in dbm for [ENSG00000234466.1]
WARNING, no entry stored in dbm for [ENSG00000236417.2]
WARNING, no entry stored in dbm for [ENSG00000255319.5]
WARNING, no entry stored in dbm for [ENSG00000244618.3]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000246695.8]
WARNING, no entry stored in dbm for [ENSG00000184441.4]
WARNING, no entry stored in dbm for [ENSG00000279066.1]
WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000217896.2]
WARNING, no entry stored in dbm for [ENSG00000232000.3]
WARNING, no entry stored in dbm for [ENSG00000285492.1]
WARNING, no entry stored in dbm for [ENSG00000283597.3]
WARNING, no entry stored in dbm for [ENSG00000287077.1]
WARNING, no entry stored in dbm for [ENSG00000225760.2]
WARNING, no entry stored in dbm for [ENSG00000249684.6]
WARNING, no entry stored in dbm for [ENSG00000222328.1]
WARNING, no entry stored in dbm for [ENSG00000226906.1]
WARNING, no entry stored in dbm for [ENSG00000228409.6]
WARNING, no entry stored in dbm for [ENSG00000232624.8]
WARNING, no entry stored in dbm for [ENSG00000230285.1]
WARNING, no entry stored in dbm for [ENSG00000267065.2]
WARNING, no entry stored in dbm for [ENSG00000286391.1]
WARNING, no entry stored in dbm for [ENSG00000206228.4]
WARNING, no entry stored in dbm for [ENSG00000223896.2]
WARNING, no entry stored in dbm for [ENSG00000263072.8]
WARNING, no entry stored in dbm for [ENSG00000228697.4]
WARNING, no entry stored in dbm for [ENSG00000204959.4]
WARNING, no entry stored in dbm for [ENSG00000245275.8]
WARNING, no entry stored in dbm for [ENSG00000251291.2]
WARNING, no entry stored in dbm for [ENSG00000240535.8]
WARNING, no entry stored in dbm for [ENSG00000280424.1]
WARNING, no entry stored in dbm for [ENSG00000216657.1]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000271524.1]
WARNING, no entry stored in dbm for [ENSG00000261351.2]
WARNING, no entry stored in dbm for [ENSG00000224599.1]
WARNING, no entry stored in dbm for [ENSG00000254560.6]
WARNING, no entry stored in dbm for [ENSG00000287671.1]
WARNING, no entry stored in dbm for [ENSG00000269927.1]
WARNING, no entry stored in dbm for [ENSG00000235550.1]
WARNING, no entry stored in dbm for [ENSG00000227745.1]
WARNING, no entry stored in dbm for [ENSG00000220517.2]
WARNING, no entry stored in dbm for [ENSG00000271147.8]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000204959.4]
WARNING, no entry stored in dbm for [ENSG00000250111.3]
WARNING, no entry stored in dbm for [ENSG00000266602.2]
WARNING, no entry stored in dbm for [ENSG00000251143.1]
WARNING, no entry stored in dbm for [ENSG00000251143.1]
WARNING, no entry stored in dbm for [ENSG00000251143.1]
WARNING, no entry stored in dbm for [ENSG00000251143.1]
WARNING, no entry stored in dbm for [ENSG00000255380.1]
WARNING, no entry stored in dbm for [ENSG00000264964.2]
WARNING, no entry stored in dbm for [ENSG00000226043.2]
WARNING, no entry stored in dbm for [ENSG00000228980.4]
WARNING, no entry stored in dbm for [ENSG00000232601.1]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000230021.10]
WARNING, no entry stored in dbm for [ENSG00000286502.1]
WARNING, no entry stored in dbm for [ENSG00000270780.1]
WARNING, no entry stored in dbm for [ENSG00000233928.6]
WARNING, no entry stored in dbm for [ENSG00000236021.2]
WARNING, no entry stored in dbm for [ENSG00000285079.1]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000287782.1]
WARNING, no entry stored in dbm for [ENSG00000231970.1]
WARNING, no entry stored in dbm for [ENSG00000217786.1]
WARNING, no entry stored in dbm for [ENSG00000259723.1]
WARNING, no entry stored in dbm for [ENSG00000246203.2]
WARNING, no entry stored in dbm for [ENSG00000286699.1]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000228430.9]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000259049.1]
WARNING, no entry stored in dbm for [ENSG00000242888.1]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000235122.4]
WARNING, no entry stored in dbm for [ENSG00000216775.3]
WARNING, no entry stored in dbm for [ENSG00000261116.1]
WARNING, no entry stored in dbm for [ENSG00000280184.2]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000231165.3]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000241473.1]
WARNING, no entry stored in dbm for [ENSG00000235499.1]
WARNING, no entry stored in dbm for [ENSG00000227627.3]
WARNING, no entry stored in dbm for [ENSG00000276216.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000276298.1]
WARNING, no entry stored in dbm for [ENSG00000242073.2]
WARNING, no entry stored in dbm for [ENSG00000230638.4]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000214135.8]
WARNING, no entry stored in dbm for [ENSG00000255992.1]
WARNING, no entry stored in dbm for [ENSG00000254860.6]
WARNING, no entry stored in dbm for [ENSG00000285668.1]
WARNING, no entry stored in dbm for [ENSG00000260971.4]
WARNING, no entry stored in dbm for [ENSG00000241473.1]
WARNING, no entry stored in dbm for [ENSG00000229349.2]
WARNING, no entry stored in dbm for [ENSG00000259692.6]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000280219.1]
WARNING, no entry stored in dbm for [ENSG00000249741.2]
WARNING, no entry stored in dbm for [ENSG00000287031.1]
WARNING, no entry stored in dbm for [ENSG00000286759.1]
WARNING, no entry stored in dbm for [ENSG00000284428.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000248126.1]
WARNING, no entry stored in dbm for [ENSG00000240519.1]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000244953.1]
WARNING, no entry stored in dbm for [ENSG00000227210.2]
WARNING, no entry stored in dbm for [ENSG00000259605.3]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000259605.3]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000248206.2]
WARNING, no entry stored in dbm for [ENSG00000285567.2]
WARNING, no entry stored in dbm for [ENSG00000273257.2]
WARNING, no entry stored in dbm for [ENSG00000287188.1]
WARNING, no entry stored in dbm for [ENSG00000257337.7]
WARNING, no entry stored in dbm for [ENSG00000240535.8]
WARNING, no entry stored in dbm for [ENSG00000185641.6]
WARNING, no entry stored in dbm for [ENSG00000261386.2]
WARNING, no entry stored in dbm for [ENSG00000223703.1]
WARNING, no entry stored in dbm for [ENSG00000223703.1]
WARNING, no entry stored in dbm for [ENSG00000263766.5]
WARNING, no entry stored in dbm for [ENSG00000250764.1]
WARNING, no entry stored in dbm for [ENSG00000250764.1]
WARNING, no entry stored in dbm for [ENSG00000274461.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000247934.4]
WARNING, no entry stored in dbm for [ENSG00000287858.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000231189.1]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000186076.5]
WARNING, no entry stored in dbm for [ENSG00000257453.1]
WARNING, no entry stored in dbm for [ENSG00000197813.6]
WARNING, no entry stored in dbm for [ENSG00000277171.1]
WARNING, no entry stored in dbm for [ENSG00000272702.1]
WARNING, no entry stored in dbm for [ENSG00000268119.6]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000286797.1]
WARNING, no entry stored in dbm for [ENSG00000279803.1]
WARNING, no entry stored in dbm for [ENSG00000279991.1]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000260482.3]
WARNING, no entry stored in dbm for [ENSG00000279300.1]
WARNING, no entry stored in dbm for [ENSG00000271150.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000213238.6]
WARNING, no entry stored in dbm for [ENSG00000283041.1]
WARNING, no entry stored in dbm for [ENSG00000267009.6]
WARNING, no entry stored in dbm for [ENSG00000224415.1]
WARNING, no entry stored in dbm for [ENSG00000233028.1]
WARNING, no entry stored in dbm for [ENSG00000283214.1]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000268723.1]
WARNING, no entry stored in dbm for [ENSG00000287409.1]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000287643.1]
WARNING, no entry stored in dbm for [ENSG00000286423.1]
WARNING, no entry stored in dbm for [ENSG00000277283.1]
WARNING, no entry stored in dbm for [ENSG00000280054.1]
WARNING, no entry stored in dbm for [ENSG00000228113.7]
WARNING, no entry stored in dbm for [ENSG00000278922.1]
WARNING, no entry stored in dbm for [ENSG00000251595.7]


	* STAR-Fusion complete.  See output: /tmp/nxf.SJCAxqNKsu/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)