Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cf/6ba786d91f09efbd691b91f9d25f6c/aih-tih-sc-f4e5c4-R1_B23WHYVLT4_1.Chimeric.out.junction Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9a/bd11f3d748c9489e6a535c05564bd0/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9a/bd11f3d748c9489e6a535c05564bd0/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/56/c64f9385454ba9dcf8fdd0adcd1351/aih-tih-sc-f4e5c4-R1_B23WHYVLT4_1_1.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/56/c64f9385454ba9dcf8fdd0adcd1351/aih-tih-sc-f4e5c4-R1_B23WHYVLT4_1_2.fastp.fastq.gz ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.SJCAxqNKsu/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary -sample contains 167289700 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir -J /tmp/nxf.SJCAxqNKsu/aih-tih-sc-f4e5c4-R1_B23WHYVLT4_1.Chimeric.out.junction -O /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.SJCAxqNKsu/aih-tih-sc-f4e5c4-R1_B23WHYVLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.05 min). -mapping reads to genes [10000], rate=75000.00/min [20000], rate=80000.00/min [30000], rate=85714.29/min [40000], rate=85714.29/min [50000], rate=88235.29/min [60000], rate=90000.00/min [70000], rate=91304.35/min [80000], rate=94117.65/min [90000], rate=96428.57/min [100000], rate=98360.66/min [110000], rate=97058.82/min [120000], rate=90000.00/min [130000], rate=85714.29/min [140000], rate=82352.94/min [150000], rate=79646.02/min [160000], rate=78048.78/min [170000], rate=76119.40/min [180000], rate=75524.48/min [190000], rate=74509.80/min [200000], rate=74534.16/min [210000], rate=74117.65/min [220000], rate=74157.30/min [230000], rate=74594.59/min [240000], rate=74611.40/min [250000], rate=75000.00/min [260000], rate=75728.16/min [270000], rate=76056.34/min [280000], rate=75675.68/min [290000], rate=76315.79/min [300000], rate=75000.00/min [310000], rate=73228.35/min [320000], rate=71910.11/min [330000], rate=70714.29/min [340000], rate=69863.01/min [350000], rate=69078.95/min [360000], rate=67289.72/min [370000], rate=65102.64/min [380000], rate=64589.24/min [390000], rate=64285.71/min [400000], rate=64171.12/min [410000], rate=63076.92/min [420000], rate=62222.22/min [430000], rate=61870.50/min [440000], rate=61971.83/min [450000], rate=62211.98/min [460000], rate=62585.03/min [470000], rate=62806.24/min [480000], rate=63157.89/min [490000], rate=63362.07/min [500000], rate=63829.79/min [510000], rate=64150.94/min [520000], rate=64596.27/min [530000], rate=64242.42/min [540000], rate=63405.09/min [550000], rate=62737.64/min [560000], rate=62337.66/min [570000], rate=62068.97/min [580000], rate=62032.09/min [590000], rate=61888.11/min [600000], rate=61749.57/min [610000], rate=61512.61/min [620000], rate=61184.21/min [630000], rate=61066.24/min [640000], rate=60759.49/min [650000], rate=60371.52/min [660000], rate=60091.05/min [670000], rate=60000.00/min [680000], rate=60000.00/min [690000], rate=60087.08/min [700000], rate=60085.84/min [710000], rate=60169.49/min [720000], rate=60167.13/min [730000], rate=60330.58/min [740000], rate=60490.46/min [750000], rate=60646.90/min [760000], rate=61044.18/min [770000], rate=61192.05/min [780000], rate=61498.03/min [790000], rate=61799.22/min [800000], rate=62015.50/min [810000], rate=62387.68/min [820000], rate=62675.16/min [830000], rate=62641.51/min [840000], rate=61992.62/min [850000], rate=61298.08/min [860000], rate=60634.55/min [870000], rate=59793.81/min [880000], rate=59325.84/min [890000], rate=58616.90/min [900000], rate=58127.02/min [910000], rate=57292.76/min [920000], rate=57261.41/min [930000], rate=57113.61/min [940000], rate=57027.30/min [950000], rate=56829.51/min [960000], rate=56804.73/min [970000], rate=56891.50/min [980000], rate=56702.03/min [990000], rate=56679.39/min [1000000], rate=56764.43/min [1010000], rate=56794.75/min [1020000], rate=56771.80/min [1030000], rate=56801.47/min [1040000], rate=56675.75/min [1050000], rate=56300.27/min [1060000], rate=55936.68/min [1070000], rate=55874.67/min [1080000], rate=55290.10/min [1090000], rate=55283.18/min [1100000], rate=55462.18/min [1110000], rate=55685.62/min [1120000], rate=55906.82/min [1130000], rate=56125.83/min [1140000], rate=56482.25/min [1150000], rate=56696.80/min [1160000], rate=56909.24/min [1170000], rate=57119.61/min [1180000], rate=56958.97/min [1190000], rate=56801.91/min [1200000], rate=56648.31/min [1210000], rate=56498.05/min [1220000], rate=56437.93/min [1230000], rate=56422.02/min [1240000], rate=56320.97/min [1250000], rate=56306.31/min [1260000], rate=55670.10/min [1270000], rate=55377.91/min [1280000], rate=55014.33/min [1290000], rate=54854.71/min [1300000], rate=54968.29/min [1310000], rate=55080.59/min [1320000], rate=55191.64/min [1330000], rate=55148.58/min [1340000], rate=55257.73/min [1350000], rate=55252.39/min [1360000], rate=55472.47/min [1370000], rate=55653.35/min [1380000], rate=55870.45/min [1390000], rate=56048.39/min [1400000], rate=56224.90/min [1410000], rate=56362.43/min [1420000], rate=56311.96/min [1430000], rate=55932.20/min [1440000], rate=55420.14/min [1450000], rate=54409.01/min [1460000], rate=53382.08/min [1470000], rate=53036.68/min [1480000], rate=52451.27/min [1490000], rate=52158.69/min [1500000], rate=51843.32/min [1510000], rate=51389.68/min [1520000], rate=50978.20/min [1530000], rate=50662.25/min [1540000], rate=50741.35/min [1550000], rate=50791.92/min [1560000], rate=50539.96/min [1570000], rate=50617.95/min [1580000], rate=50803.86/min [1590000], rate=50961.54/min [1600000], rate=51091.01/min [1610000], rate=51246.68/min [1620000], rate=51401.37/min [1630000], rate=51527.92/min [1640000], rate=51383.81/min [1650000], rate=51348.55/min [1660000], rate=51340.21/min [1670000], rate=51410.98/min [1680000], rate=51428.57/min [1690000], rate=51472.08/min [1700000], rate=51567.24/min [1710000], rate=51583.71/min [1720000], rate=51651.65/min [1730000], rate=51744.77/min [1740000], rate=51811.41/min [1750000], rate=51903.11/min [1760000], rate=52019.70/min [1770000], rate=51754.39/min [1780000], rate=51744.19/min [1790000], rate=51535.51/min [1800000], rate=51330.80/min [1810000], rate=51469.19/min -building interval tree based on /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=54545.45/min [20000], rate=52173.91/min [30000], rate=52941.18/min [40000], rate=53333.33/min [50000], rate=52631.58/min [60000], rate=52941.18/min [70000], rate=53164.56/min [80000], rate=53333.33/min [90000], rate=53465.35/min [100000], rate=54054.05/min [110000], rate=55000.00/min [120000], rate=55384.62/min [130000], rate=56115.11/min [140000], rate=56375.84/min [150000], rate=57324.84/min [160000], rate=58181.82/min [170000], rate=58959.54/min [180000], rate=60000.00/min [190000], rate=60962.57/min [200000], rate=61855.67/min [210000], rate=62686.57/min [220000], rate=63461.54/min [230000], rate=63594.47/min [240000], rate=64285.71/min [250000], rate=65217.39/min [260000], rate=66101.69/min [270000], rate=66942.15/min [280000], rate=68016.19/min [290000], rate=68774.70/min [300000], rate=67924.53/min [310000], rate=67148.01/min [320000], rate=65753.42/min [330000], rate=64077.67/min [340000], rate=62006.08/min [350000], rate=60171.92/min [360000], rate=58855.59/min [370000], rate=56923.08/min [380000], rate=55745.72/min [390000], rate=54929.58/min [400000], rate=54176.07/min [410000], rate=53594.77/min [420000], rate=53389.83/min [430000], rate=53195.88/min [440000], rate=53012.05/min [450000], rate=52941.18/min [460000], rate=52975.05/min [470000], rate=53007.52/min [480000], rate=53136.53/min [490000], rate=52877.70/min [500000], rate=52631.58/min [510000], rate=52487.14/min [520000], rate=52525.25/min [530000], rate=52736.32/min [540000], rate=52768.73/min [550000], rate=52800.00/min [560000], rate=52913.39/min [570000], rate=52941.18/min [580000], rate=52968.04/min [590000], rate=52914.80/min [600000], rate=53019.15/min [610000], rate=53043.48/min [620000], rate=52916.07/min [630000], rate=52941.18/min [640000], rate=52965.52/min [650000], rate=52989.13/min [660000], rate=53083.11/min [670000], rate=53104.36/min [680000], rate=53263.71/min [690000], rate=53488.37/min [700000], rate=53639.85/min [710000], rate=53855.88/min [720000], rate=54067.58/min [730000], rate=54342.43/min [740000], rate=54612.55/min [750000], rate=54945.05/min [760000], rate=55205.81/min [770000], rate=55462.18/min [780000], rate=55714.29/min [790000], rate=55962.22/min [800000], rate=56271.98/min [810000], rate=56577.42/min [820000], rate=56747.40/min [830000], rate=56914.29/min [840000], rate=56949.15/min [850000], rate=57110.86/min [860000], rate=57142.86/min [870000], rate=57362.64/min [880000], rate=57453.75/min [890000], rate=57543.10/min [900000], rate=57569.30/min [910000], rate=57777.78/min [920000], rate=57922.35/min [930000], rate=58004.16/min [940000], rate=58204.33/min [950000], rate=58401.64/min [960000], rate=58596.13/min [970000], rate=58906.88/min [980000], rate=59036.14/min [990000], rate=59163.35/min [1000000], rate=59464.82/min [1010000], rate=59940.65/min [1020000], rate=60355.03/min [1030000], rate=60588.24/min [1040000], rate=60878.05/min [1050000], rate=61105.72/min [1060000], rate=61095.10/min [1070000], rate=60968.66/min [1080000], rate=60674.16/min [1090000], rate=60893.85/min [1100000], rate=60164.08/min [1110000], rate=59411.24/min [1120000], rate=59416.45/min [1130000], rate=59630.61/min [1140000], rate=59790.21/min [1150000], rate=60156.93/min [1160000], rate=60521.74/min [1170000], rate=60569.46/min [1180000], rate=60824.74/min [1190000], rate=61130.14/min [1200000], rate=61381.07/min [1210000], rate=61629.88/min [1220000], rate=61928.93/min [1230000], rate=62225.97/min [1240000], rate=62311.56/min [1250000], rate=62604.34/min [1260000], rate=62634.63/min [1270000], rate=62975.21/min [1280000], rate=63157.89/min [1290000], rate=63338.79/min [1300000], rate=63725.49/min [1310000], rate=63954.43/min [1320000], rate=64181.52/min [1330000], rate=64458.80/min [1340000], rate=64682.22/min [1350000], rate=64851.88/min [1360000], rate=64916.47/min [1370000], rate=65031.65/min [1380000], rate=65196.85/min [1390000], rate=65309.32/min [1400000], rate=65471.55/min [1410000], rate=65632.27/min [1420000], rate=65690.05/min [1430000], rate=65747.13/min [1440000], rate=65803.50/min [1450000], rate=65909.09/min [1460000], rate=66013.56/min [1470000], rate=65968.59/min [1480000], rate=65973.25/min [1490000], rate=66124.26/min [1500000], rate=66079.30/min [1510000], rate=66034.99/min [1520000], rate=66134.88/min [1530000], rate=66233.77/min [1540000], rate=66379.31/min [1550000], rate=66381.16/min [1560000], rate=66477.27/min [1570000], rate=66384.78/min [1580000], rate=64665.76/min [1590000], rate=62230.92/min [1600000], rate=60721.06/min [1610000], rate=59629.63/min [1620000], rate=59304.45/min [1630000], rate=59093.66/min [1640000], rate=58676.21/min [1650000], rate=58407.08/min [1660000], rate=57839.72/min [1670000], rate=57322.65/min [1680000], rate=56218.63/min [1690000], rate=55198.69/min [1700000], rate=54779.81/min [1710000], rate=54056.90/min [1720000], rate=53499.22/min [1730000], rate=52770.72/min [1740000], rate=52043.87/min [1750000], rate=51571.71/min [1760000], rate=51212.42/min [1770000], rate=51230.10/min [1780000], rate=51247.60/min [1790000], rate=51289.40/min [1800000], rate=51355.21/min [1810000], rate=51396.12/min -building interval tree based on /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.05 min). -mapping reads to genes [10000], rate=120000.00/min [20000], rate=120000.00/min [30000], rate=120000.00/min [40000], rate=114285.71/min [50000], rate=100000.00/min [60000], rate=97297.30/min [70000], rate=95454.55/min [80000], rate=94117.65/min [90000], rate=93103.45/min [100000], rate=95238.10/min [110000], rate=95652.17/min [120000], rate=97297.30/min [130000], rate=97500.00/min [140000], rate=93333.33/min [150000], rate=89108.91/min [160000], rate=86486.49/min [170000], rate=85000.00/min [180000], rate=83076.92/min [190000], rate=82608.70/min [200000], rate=81632.65/min [210000], rate=80769.23/min [220000], rate=80487.80/min [230000], rate=80701.75/min [240000], rate=80898.88/min [250000], rate=81521.74/min [260000], rate=81675.39/min [270000], rate=82653.06/min [280000], rate=83168.32/min [290000], rate=83653.85/min [300000], rate=83720.93/min [310000], rate=84162.90/min [320000], rate=85714.29/min [330000], rate=86842.11/min [340000], rate=87553.65/min [350000], rate=88983.05/min [360000], rate=90000.00/min [370000], rate=90612.24/min [380000], rate=91935.48/min [390000], rate=92857.14/min [400000], rate=91603.05/min [410000], rate=89781.02/min [420000], rate=88732.39/min [430000], rate=87755.10/min [440000], rate=86557.38/min [450000], rate=85173.50/min [460000], rate=83890.58/min [470000], rate=82941.18/min [480000], rate=82285.71/min [490000], rate=82584.27/min [500000], rate=82417.58/min [510000], rate=83152.17/min [520000], rate=83200.00/min [530000], rate=83028.72/min [540000], rate=81000.00/min [550000], rate=78199.05/min [560000], rate=76537.59/min [570000], rate=75496.69/min [580000], rate=74678.11/min [590000], rate=73750.00/min [600000], rate=72727.27/min [610000], rate=71905.70/min [620000], rate=71264.37/min [630000], rate=70919.32/min [640000], rate=70718.23/min [650000], rate=70397.11/min [660000], rate=70212.77/min [670000], rate=70034.84/min [680000], rate=69863.01/min [690000], rate=69814.50/min [700000], rate=69767.44/min [710000], rate=69607.84/min [720000], rate=69230.77/min [730000], rate=69085.17/min [740000], rate=68624.42/min [750000], rate=68597.56/min [760000], rate=68778.28/min [770000], rate=68647.85/min [780000], rate=68421.05/min [790000], rate=68103.45/min [800000], rate=68181.82/min [810000], rate=67972.03/min [820000], rate=67862.07/min [830000], rate=68032.79/min [840000], rate=68016.19/min [850000], rate=68000.00/min [860000], rate=67716.54/min [870000], rate=67616.58/min [880000], rate=67432.95/min [890000], rate=67339.22/min [900000], rate=67331.67/min [910000], rate=67324.29/min [920000], rate=67235.08/min [930000], rate=67472.79/min [940000], rate=67544.91/min [950000], rate=67375.89/min [960000], rate=67289.72/min [970000], rate=67128.03/min [980000], rate=67353.95/min [990000], rate=67500.00/min [1000000], rate=67415.73/min [1010000], rate=67408.23/min [1020000], rate=67326.73/min [1030000], rate=67247.01/min [1040000], rate=67169.00/min [1050000], rate=67021.28/min [1060000], rate=67017.91/min [1070000], rate=67014.61/min [1080000], rate=67150.26/min [1090000], rate=67283.95/min [1100000], rate=67484.66/min [1110000], rate=67682.93/min [1120000], rate=67878.79/min [1130000], rate=68072.29/min [1140000], rate=67389.16/min [1150000], rate=66028.71/min [1160000], rate=64864.86/min [1170000], rate=63876.25/min [1180000], rate=61511.73/min [1190000], rate=60508.47/min [1200000], rate=58346.84/min [1210000], rate=57165.35/min [1220000], rate=56744.19/min [1230000], rate=56465.19/min [1240000], rate=56278.37/min [1250000], rate=55637.98/min [1260000], rate=55102.04/min [1270000], rate=54780.73/min [1280000], rate=54545.45/min [1290000], rate=54315.79/min [1300000], rate=54129.08/min [1310000], rate=53578.73/min [1320000], rate=53405.26/min [1330000], rate=52882.70/min [1340000], rate=52480.42/min [1350000], rate=51989.73/min [1360000], rate=51645.57/min [1370000], rate=51600.75/min [1380000], rate=51524.58/min [1390000], rate=51513.28/min [1400000], rate=51533.74/min [1410000], rate=51585.37/min [1420000], rate=51699.03/min [1430000], rate=51780.33/min [1440000], rate=51674.64/min [1450000], rate=51662.71/min [1460000], rate=51681.42/min [1470000], rate=51219.51/min [1480000], rate=50859.11/min [1490000], rate=50622.88/min [1500000], rate=49972.24/min [1510000], rate=49671.05/min [1520000], rate=49297.30/min [1530000], rate=49064.67/min [1540000], rate=48992.58/min [1550000], rate=49128.37/min [1560000], rate=49237.24/min [1570000], rate=49345.21/min [1580000], rate=49478.08/min [1590000], rate=49635.80/min [1600000], rate=49766.72/min [1610000], rate=49922.48/min [1620000], rate=50051.49/min [1630000], rate=50179.58/min [1640000], rate=50332.48/min [1650000], rate=50407.33/min [1660000], rate=50353.89/min [1670000], rate=50351.76/min [1680000], rate=49975.21/min [1690000], rate=50074.07/min [1700000], rate=50122.85/min [1710000], rate=50269.48/min [1720000], rate=50170.15/min [1730000], rate=49784.17/min [1740000], rate=49198.87/min [1750000], rate=48928.24/min [1760000], rate=48641.18/min [1770000], rate=48010.85/min [1780000], rate=47785.23/min [1790000], rate=47669.77/min [1800000], rate=47556.14/min -building interval tree based on /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.05 min). -mapping reads to genes [10000], rate=150000.00/min [20000], rate=150000.00/min [30000], rate=112500.00/min [40000], rate=126315.79/min [50000], rate=130434.78/min [60000], rate=133333.33/min [70000], rate=144827.59/min [80000], rate=145454.55/min [90000], rate=150000.00/min [100000], rate=153846.15/min [110000], rate=160975.61/min [120000], rate=160000.00/min [130000], rate=159183.67/min [140000], rate=158490.57/min [150000], rate=150000.00/min [160000], rate=152380.95/min [170000], rate=152238.81/min [180000], rate=152112.68/min [190000], rate=156164.38/min [200000], rate=157894.74/min [210000], rate=159493.67/min [220000], rate=162962.96/min [230000], rate=164285.71/min [240000], rate=161797.75/min [250000], rate=163043.48/min [260000], rate=160824.74/min [270000], rate=155769.23/min [280000], rate=158490.57/min [290000], rate=158181.82/min [300000], rate=160714.29/min [310000], rate=160344.83/min [320000], rate=161344.54/min [330000], rate=162295.08/min [340000], rate=161904.76/min [350000], rate=161538.46/min [360000], rate=161194.03/min [370000], rate=157446.81/min [380000], rate=156164.38/min [390000], rate=157046.98/min [400000], rate=156862.75/min [410000], rate=158709.68/min [420000], rate=159493.67/min [430000], rate=160248.45/min [440000], rate=160975.61/min [450000], rate=157894.74/min [460000], rate=143005.18/min [470000], rate=125892.86/min [480000], rate=115662.65/min [490000], rate=109701.49/min [500000], rate=101694.92/min [510000], rate=91891.89/min [520000], rate=86426.59/min [530000], rate=78908.19/min [540000], rate=75000.00/min [550000], rate=71428.57/min [560000], rate=68154.16/min [570000], rate=65642.99/min [580000], rate=63272.73/min [590000], rate=61245.67/min [600000], rate=59405.94/min [610000], rate=57456.83/min [620000], rate=55605.38/min [630000], rate=54388.49/min [640000], rate=52965.52/min [650000], rate=52000.00/min [660000], rate=51228.98/min [670000], rate=50566.04/min [680000], rate=50184.50/min [690000], rate=49699.88/min [700000], rate=49295.77/min [710000], rate=48797.25/min [720000], rate=48539.33/min [730000], rate=48344.37/min [740000], rate=48260.87/min [750000], rate=47872.34/min [760000], rate=47798.74/min [770000], rate=47776.63/min [780000], rate=47803.88/min [790000], rate=47638.19/min [800000], rate=46601.94/min [810000], rate=46110.06/min [820000], rate=45981.31/min [830000], rate=45730.03/min [840000], rate=45693.56/min [850000], rate=45617.17/min [860000], rate=45663.72/min [870000], rate=45312.50/min [880000], rate=45012.79/min [890000], rate=44949.49/min [900000], rate=44962.53/min [910000], rate=45012.37/min [920000], rate=45098.04/min [930000], rate=45218.80/min [940000], rate=45337.62/min [950000], rate=45490.82/min [960000], rate=45641.84/min [970000], rate=45790.72/min [980000], rate=45652.17/min [990000], rate=45798.00/min [1000000], rate=45977.01/min [1010000], rate=46224.26/min [1020000], rate=46433.99/min [1030000], rate=46641.51/min [1040000], rate=46882.04/min [1050000], rate=46909.90/min [1060000], rate=46833.58/min [1070000], rate=46724.89/min [1080000], rate=46652.27/min [1090000], rate=46647.65/min [1100000], rate=46709.13/min [1110000], rate=46835.44/min [1120000], rate=46764.09/min [1130000], rate=46694.21/min [1140000], rate=46435.85/min [1150000], rate=46370.97/min [1160000], rate=46461.95/min [1170000], rate=46428.57/min [1180000], rate=46456.69/min [1190000], rate=46213.59/min [1200000], rate=46035.81/min [1210000], rate=46153.85/min [1220000], rate=46329.11/min [1230000], rate=46240.60/min [1240000], rate=45200.49/min [1250000], rate=45018.01/min [1260000], rate=44760.21/min [1270000], rate=44276.58/min [1280000], rate=43910.81/min [1290000], rate=43385.65/min [1300000], rate=43333.33/min [1310000], rate=43163.10/min [1320000], rate=42880.35/min [1330000], rate=42903.23/min [1340000], rate=42811.50/min [1350000], rate=42834.48/min [1360000], rate=42367.60/min [1370000], rate=42283.95/min [1380000], rate=42223.36/min [1390000], rate=41846.46/min [1400000], rate=41895.26/min [1410000], rate=41964.29/min [1420000], rate=41785.19/min [1430000], rate=41670.71/min [1440000], rate=41260.74/min [1450000], rate=40902.68/min [1460000], rate=41011.24/min [1470000], rate=41099.72/min [1480000], rate=41225.63/min [1490000], rate=41350.60/min [1500000], rate=41474.65/min [1510000], rate=41369.86/min [1520000], rate=41192.41/min [1530000], rate=41276.98/min [1540000], rate=40903.05/min [1550000], rate=40120.79/min [1560000], rate=39863.71/min [1570000], rate=39201.00/min [1580000], rate=38804.75/min [1590000], rate=38780.49/min [1600000], rate=38756.56/min [1610000], rate=38686.42/min [1620000], rate=38586.74/min [1630000], rate=38595.11/min [1640000], rate=38588.24/min [1650000], rate=38566.42/min [1660000], rate=38396.30/min [1670000], rate=38215.10/min [1680000], rate=38268.79/min [1690000], rate=38336.48/min [1700000], rate=38389.16/min [1710000], rate=38441.36/min [1720000], rate=38335.81/min [1730000], rate=38274.34/min [1740000], rate=38354.15/min [1750000], rate=38461.54/min [1760000], rate=38568.30/min [1770000], rate=38674.44/min [1780000], rate=38779.96/min [1790000], rate=38898.95/min [1800000], rate=39003.25/min [1810000], rate=39135.14/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir --filt_file /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 18000000.00 reads per min processed... 12000000.00 reads per min processed... 7500000.00 reads per min processed... 7200000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5500000.00 reads per min processed... 5538461.54 reads per min processed... 5200000.00 reads per min processed... 4941176.47 reads per min processed... 5000000.00 reads per min processed... 5052631.58 reads per min processed... 4857142.86 reads per min processed... 4695652.17 reads per min processed... 4560000.00 reads per min processed... 4444444.44 reads per min processed... 4344827.59 reads per min processed... 4258064.52 reads per min processed... 4181818.18 reads per min processed... 4114285.71 reads per min processed... 4166666.67 reads per min processed... 4105263.16 reads per min processed... 4050000.00 reads per min processed... 4097560.98 reads per min processed... 4046511.63 reads per min processed... 4090909.09 reads per min processed... 4133333.33 reads per min processed... 4173913.04 reads per min processed... 4125000.00 reads per min processed... 4080000.00 reads per min processed... 4038461.54 reads per min processed... 4075471.70 reads per min processed... 4111111.11 reads per min processed... 4145454.55 reads per min processed... 4254545.45 reads per min processed... 4285714.29 reads per min processed... 4241379.31 reads per min processed... 4271186.44 reads per min processed... 4229508.20 reads per min processed... 4258064.52 reads per min processed... 4218750.00 reads per min processed... 4246153.85 reads per min processed... 4208955.22 reads per min processed... 4235294.12 reads per min processed... 4200000.00 reads per min processed... 4225352.11 reads per min processed... 4191780.82 reads per min processed... 4160000.00 reads per min processed... 4184210.53 reads per min processed... 4207792.21 reads per min processed... 4177215.19 reads per min processed... 4200000.00 reads per min processed... 4222222.22 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.SJCAxqNKsu/aih-tih-sc-f4e5c4-R1_B23WHYVLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -203630.995028 EM: Round [1] log likelihood: -203494.061187 EM: Round [2] log likelihood: -203440.923517 EM: Round [3] log likelihood: -203415.390029 EM: Round [4] log likelihood: -203401.715067 EM: Round [5] log likelihood: -203393.861033 EM: Round [6] log likelihood: -203389.093932 EM: Round [7] log likelihood: -203386.056495 EM: Round [8] log likelihood: -203384.035173 EM: Round [9] log likelihood: -203382.637278 EM: Round [10] log likelihood: -203381.637418 EM: Round [11] log likelihood: -203380.900977 EM: Round [12] log likelihood: -203380.344504 EM: Round [13] log likelihood: -203379.914475 EM: Round [14] log likelihood: -203379.575488 EM: Round [15] log likelihood: -203379.303483 EM: Round [16] log likelihood: -203379.081712 EM: Round [17] log likelihood: -203378.898272 EM: Round [18] log likelihood: -203378.744544 EM: Round [19] log likelihood: -203378.614183 EM: Round [20] log likelihood: -203378.502450 EM: Round [21] log likelihood: -203378.405757 EM: Round [22] log likelihood: -203378.321350 EM: Round [23] log likelihood: -203378.247094 EM: Round [24] log likelihood: -203378.181311 EM: Round [25] log likelihood: -203378.122668 EM: Round [26] log likelihood: -203378.070099 EM: Round [27] log likelihood: -203378.022738 EM: Round [28] log likelihood: -203377.979877 EM: Round [29] log likelihood: -203377.940932 EM: Round [30] log likelihood: -203377.905417 EM: Round [31] log likelihood: -203377.872923 EM: Round [32] log likelihood: -203377.843104 EM: Round [33] log likelihood: -203377.815667 EM: Round [34] log likelihood: -203377.790359 EM: Round [35] log likelihood: -203377.766961 EM: Round [36] log likelihood: -203377.745286 EM: Round [37] log likelihood: -203377.725167 EM: Round [38] log likelihood: -203377.706461 EM: Round [39] log likelihood: -203377.689039 EM: Round [40] log likelihood: -203377.672788 EM: Round [41] log likelihood: -203377.657609 EM: Round [42] log likelihood: -203377.643413 EM: Round [43] log likelihood: -203377.630118 EM: Round [44] log likelihood: -203377.617654 EM: Round [45] log likelihood: -203377.605955 EM: Round [46] log likelihood: -203377.594965 EM: Round [47] log likelihood: -203377.584629 EM: Round [48] log likelihood: -203377.574900 EM: Round [49] log likelihood: -203377.565736 EM: Round [50] log likelihood: -203377.557095 EM: Round [51] log likelihood: -203377.548943 EM: Round [52] log likelihood: -203377.541245 EM: Round [53] log likelihood: -203377.533972 EM: Round [54] log likelihood: -203377.527096 EM: Round [55] log likelihood: -203377.520591 EM: Round [56] log likelihood: -203377.514434 EM: Round [57] log likelihood: -203377.508603 EM: Round [58] log likelihood: -203377.503078 EM: Round [59] log likelihood: -203377.497840 EM: Round [60] log likelihood: -203377.492872 EM: Round [61] log likelihood: -203377.488159 EM: Round [62] log likelihood: -203377.483684 EM: Round [63] log likelihood: -203377.479435 EM: Round [64] log likelihood: -203377.475398 EM: Round [65] log likelihood: -203377.471561 EM: Round [66] log likelihood: -203377.467914 EM: Round [67] log likelihood: -203377.464446 EM: Round [68] log likelihood: -203377.461147 EM: Round [69] log likelihood: -203377.458008 EM: Round [70] log likelihood: -203377.455020 EM: Round [71] log likelihood: -203377.452175 EM: Round [72] log likelihood: -203377.449466 EM: Round [73] log likelihood: -203377.446885 EM: Round [74] log likelihood: -203377.444426 EM: Round [75] log likelihood: -203377.442083 EM: Round [76] log likelihood: -203377.439850 EM: Round [77] log likelihood: -203377.437720 EM: Round [78] log likelihood: -203377.435690 EM: Round [79] log likelihood: -203377.433753 EM: Round [80] log likelihood: -203377.431906 EM: Round [81] log likelihood: -203377.430143 EM: Round [82] log likelihood: -203377.428461 EM: Round [83] log likelihood: -203377.426856 EM: Round [84] log likelihood: -203377.425324 EM: Round [85] log likelihood: -203377.423861 EM: Round [86] log likelihood: -203377.422464 EM: Round [87] log likelihood: -203377.421130 EM: Round [88] log likelihood: -203377.419855 EM: Round [89] log likelihood: -203377.418638 EM: Round [90] log likelihood: -203377.417475 EM: Round [91] log likelihood: -203377.416364 EM: Round [92] log likelihood: -203377.415303 EM: Round [93] log likelihood: -203377.414288 EM: Round [94] log likelihood: -203377.413318 EM: Round [95] log likelihood: -203377.412391 EM: Round [96] log likelihood: -203377.411504 EM: Round [97] log likelihood: -203377.410657 EM: Round [98] log likelihood: -203377.409846 EM: Round [99] log likelihood: -203377.409071 EM: Round [100] log likelihood: -203377.408330 EM: Round [101] log likelihood: -203377.407621 EM: Round [102] log likelihood: -203377.406943 EM: Round [103] log likelihood: -203377.406294 EM: Round [104] log likelihood: -203377.405673 EM: Round [105] log likelihood: -203377.405078 EM: Round [106] log likelihood: -203377.404510 EM: Round [107] log likelihood: -203377.403966 EM: Round [108] log likelihood: -203377.403445 EM: Round [109] log likelihood: -203377.402946 EM: Round [110] log likelihood: -203377.402469 EM: Round [111] log likelihood: -203377.402012 EM: Round [112] log likelihood: -203377.401574 EM: Round [113] log likelihood: -203377.401155 EM: Round [114] log likelihood: -203377.400753 EM: Round [115] log likelihood: -203377.400369 EM: Round [116] log likelihood: -203377.400001 EM: Round [117] log likelihood: -203377.399648 EM: Round [118] log likelihood: -203377.399310 EM: Round [119] log likelihood: -203377.398987 EM: Round [120] log likelihood: -203377.398677 EM: Round [121] log likelihood: -203377.398379 EM: Round [122] log likelihood: -203377.398095 EM: Round [123] log likelihood: -203377.397822 EM: Round [124] log likelihood: -203377.397560 EM: Round [125] log likelihood: -203377.397309 EM: Round [126] log likelihood: -203377.397069 EM: Round [127] log likelihood: -203377.396839 EM: Round [128] log likelihood: -203377.396618 EM: Round [129] log likelihood: -203377.396406 EM: Round [130] log likelihood: -203377.396203 EM: Round [131] log likelihood: -203377.396008 EM: Round [132] log likelihood: -203377.395821 EM: Round [133] log likelihood: -203377.395642 EM: Round [134] log likelihood: -203377.395470 EM: Round [135] log likelihood: -203377.395305 EM: Round [136] log likelihood: -203377.395147 EM: Round [137] log likelihood: -203377.394995 EM: Round [138] log likelihood: -203377.394849 EM: Round [139] log likelihood: -203377.394709 EM: Round [140] log likelihood: -203377.394575 EM: Round [141] log likelihood: -203377.394446 EM: Round [142] log likelihood: -203377.394323 EM: Round [143] log likelihood: -203377.394204 EM: Round [144] log likelihood: -203377.394090 EM: Round [145] log likelihood: -203377.393981 EM: Round [146] log likelihood: -203377.393875 EM: Round [147] log likelihood: -203377.393775 EM: Round [148] log likelihood: -203377.393678 EM: Stopping iterations at round 148 due to insufficient improvement in likelihood. EM: Starting log likelihood: -203385.946680 EM: Round [1] log likelihood: -203277.089693 EM: Round [2] log likelihood: -203235.786380 EM: Round [3] log likelihood: -203216.299438 EM: Round [4] log likelihood: -203205.967681 EM: Round [5] log likelihood: -203200.046679 EM: Round [6] log likelihood: -203196.437910 EM: Round [7] log likelihood: -203194.118997 EM: Round [8] log likelihood: -203192.558642 EM: Round [9] log likelihood: -203191.465962 EM: Round [10] log likelihood: -203190.674074 EM: Round [11] log likelihood: -203190.083016 EM: Round [12] log likelihood: -203189.630504 EM: Round [13] log likelihood: -203189.276321 EM: Round [14] log likelihood: -203188.993668 EM: Round [15] log likelihood: -203188.764182 EM: Round [16] log likelihood: -203188.574974 EM: Round [17] log likelihood: -203188.416806 EM: Round [18] log likelihood: -203188.282933 EM: Round [19] log likelihood: -203188.168349 EM: Round [20] log likelihood: -203188.069286 EM: Round [21] log likelihood: -203187.982865 EM: Round [22] log likelihood: -203187.906863 EM: Round [23] log likelihood: -203187.839540 EM: Round [24] log likelihood: -203187.779519 EM: Round [25] log likelihood: -203187.725701 EM: Round [26] log likelihood: -203187.677197 EM: Round [27] log likelihood: -203187.633281 EM: Round [28] log likelihood: -203187.593357 EM: Round [29] log likelihood: -203187.556929 EM: Round [30] log likelihood: -203187.523580 EM: Round [31] log likelihood: -203187.492959 EM: Round [32] log likelihood: -203187.464767 EM: Round [33] log likelihood: -203187.438748 EM: Round [34] log likelihood: -203187.414681 EM: Round [35] log likelihood: -203187.392375 EM: Round [36] log likelihood: -203187.371661 EM: Round [37] log likelihood: -203187.352392 EM: Round [38] log likelihood: -203187.334440 EM: Round [39] log likelihood: -203187.317690 EM: Round [40] log likelihood: -203187.302039 EM: Round [41] log likelihood: -203187.287398 EM: Round [42] log likelihood: -203187.273683 EM: Round [43] log likelihood: -203187.260823 EM: Round [44] log likelihood: -203187.248751 EM: Round [45] log likelihood: -203187.237408 EM: Round [46] log likelihood: -203187.226740 EM: Round [47] log likelihood: -203187.216698 EM: Round [48] log likelihood: -203187.207238 EM: Round [49] log likelihood: -203187.198318 EM: Round [50] log likelihood: -203187.189902 EM: Round [51] log likelihood: -203187.181956 EM: Round [52] log likelihood: -203187.174448 EM: Round [53] log likelihood: -203187.167350 EM: Round [54] log likelihood: -203187.160636 EM: Round [55] log likelihood: -203187.154281 EM: Round [56] log likelihood: -203187.148263 EM: Round [57] log likelihood: -203187.142560 EM: Round [58] log likelihood: -203187.137155 EM: Round [59] log likelihood: -203187.132028 EM: Round [60] log likelihood: -203187.127164 EM: Round [61] log likelihood: -203187.122547 EM: Round [62] log likelihood: -203187.118163 EM: Round [63] log likelihood: -203187.113999 EM: Round [64] log likelihood: -203187.110041 EM: Round [65] log likelihood: -203187.106280 EM: Round [66] log likelihood: -203187.102702 EM: Round [67] log likelihood: -203187.099300 EM: Round [68] log likelihood: -203187.096062 EM: Round [69] log likelihood: -203187.092981 EM: Round [70] log likelihood: -203187.090047 EM: Round [71] log likelihood: -203187.087253 EM: Round [72] log likelihood: -203187.084592 EM: Round [73] log likelihood: -203187.082057 EM: Round [74] log likelihood: -203187.079642 EM: Round [75] log likelihood: -203187.077339 EM: Round [76] log likelihood: -203187.075144 EM: Round [77] log likelihood: -203187.073050 EM: Round [78] log likelihood: -203187.071054 EM: Round [79] log likelihood: -203187.069149 EM: Round [80] log likelihood: -203187.067332 EM: Round [81] log likelihood: -203187.065599 EM: Round [82] log likelihood: -203187.063944 EM: Round [83] log likelihood: -203187.062364 EM: Round [84] log likelihood: -203187.060856 EM: Round [85] log likelihood: -203187.059416 EM: Round [86] log likelihood: -203187.058041 EM: Round [87] log likelihood: -203187.056727 EM: Round [88] log likelihood: -203187.055473 EM: Round [89] log likelihood: -203187.054274 EM: Round [90] log likelihood: -203187.053129 EM: Round [91] log likelihood: -203187.052034 EM: Round [92] log likelihood: -203187.050988 EM: Round [93] log likelihood: -203187.049988 EM: Round [94] log likelihood: -203187.049032 EM: Round [95] log likelihood: -203187.048118 EM: Round [96] log likelihood: -203187.047245 EM: Round [97] log likelihood: -203187.046409 EM: Round [98] log likelihood: -203187.045610 EM: Round [99] log likelihood: -203187.044845 EM: Round [100] log likelihood: -203187.044114 EM: Round [101] log likelihood: -203187.043415 EM: Round [102] log likelihood: -203187.042745 EM: Round [103] log likelihood: -203187.042105 EM: Round [104] log likelihood: -203187.041492 EM: Round [105] log likelihood: -203187.040906 EM: Round [106] log likelihood: -203187.040345 EM: Round [107] log likelihood: -203187.039807 EM: Round [108] log likelihood: -203187.039293 EM: Round [109] log likelihood: -203187.038801 EM: Round [110] log likelihood: -203187.038329 EM: Round [111] log likelihood: -203187.037878 EM: Round [112] log likelihood: -203187.037445 EM: Round [113] log likelihood: -203187.037031 EM: Round [114] log likelihood: -203187.036635 EM: Round [115] log likelihood: -203187.036255 EM: Round [116] log likelihood: -203187.035891 EM: Round [117] log likelihood: -203187.035542 EM: Round [118] log likelihood: -203187.035209 EM: Round [119] log likelihood: -203187.034889 EM: Round [120] log likelihood: -203187.034582 EM: Round [121] log likelihood: -203187.034288 EM: Round [122] log likelihood: -203187.034006 EM: Round [123] log likelihood: -203187.033736 EM: Round [124] log likelihood: -203187.033478 EM: Round [125] log likelihood: -203187.033229 EM: Round [126] log likelihood: -203187.032992 EM: Round [127] log likelihood: -203187.032764 EM: Round [128] log likelihood: -203187.032545 EM: Round [129] log likelihood: -203187.032335 EM: Round [130] log likelihood: -203187.032134 EM: Round [131] log likelihood: -203187.031941 EM: Round [132] log likelihood: -203187.031756 EM: Round [133] log likelihood: -203187.031579 EM: Round [134] log likelihood: -203187.031408 EM: Round [135] log likelihood: -203187.031245 EM: Round [136] log likelihood: -203187.031088 EM: Round [137] log likelihood: -203187.030938 EM: Round [138] log likelihood: -203187.030793 EM: Round [139] log likelihood: -203187.030655 EM: Round [140] log likelihood: -203187.030522 EM: Round [141] log likelihood: -203187.030394 EM: Round [142] log likelihood: -203187.030272 EM: Round [143] log likelihood: -203187.030154 EM: Round [144] log likelihood: -203187.030041 EM: Round [145] log likelihood: -203187.029932 EM: Round [146] log likelihood: -203187.029828 EM: Round [147] log likelihood: -203187.029728 EM: Round [148] log likelihood: -203187.029632 EM: Stopping iterations at round 148 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 167289700 > /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir > /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir --annotate /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir -done, see /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 1815, filtered: 10853) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.SJCAxqNKsu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.SJCAxqNKsu/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000283145.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000248309.7] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000241104.5] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000232527.8] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000251557.2] WARNING, no entry stored in dbm for [ENSG00000285600.1] WARNING, no entry stored in dbm for [ENSG00000186148.13] WARNING, no entry stored in dbm for [ENSG00000251532.1] WARNING, no entry stored in dbm for [ENSG00000273252.1] WARNING, no entry stored in dbm for [ENSG00000248238.2] WARNING, no entry stored in dbm for [ENSG00000225662.2] WARNING, no entry stored in dbm for [ENSG00000215283.3] WARNING, no entry stored in dbm for [ENSG00000255391.1] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000219410.6] WARNING, no entry stored in dbm for [ENSG00000225662.2] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000236404.10] WARNING, no entry stored in dbm for [ENSG00000254076.1] WARNING, no entry stored in dbm for [ENSG00000249859.12] WARNING, no entry stored in dbm for [ENSG00000232564.3] WARNING, no entry stored in dbm for [ENSG00000287920.1] WARNING, no entry stored in dbm for [ENSG00000260727.2] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000231259.5] WARNING, no entry stored in dbm for [ENSG00000280119.1] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000204706.14] WARNING, no entry stored in dbm for [ENSG00000205628.4] WARNING, no entry stored in dbm for [ENSG00000215866.8] WARNING, no entry stored in dbm for [ENSG00000236963.7] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000237978.6] WARNING, no entry stored in dbm for [ENSG00000240137.6] WARNING, no entry stored in dbm for [ENSG00000240137.6] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000250320.6] WARNING, no entry stored in dbm for [ENSG00000237773.7] WARNING, no entry stored in dbm for [ENSG00000229452.1] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000254560.6] WARNING, no entry stored in dbm for [ENSG00000224905.7] WARNING, no entry stored in dbm for [ENSG00000215559.8] WARNING, no entry stored in dbm for [ENSG00000282885.2] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000237476.1] WARNING, no entry stored in dbm for [ENSG00000218052.5] WARNING, no entry stored in dbm for [ENSG00000203413.3] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000227270.1] WARNING, no entry stored in dbm for [ENSG00000237666.2] WARNING, no entry stored in dbm for [ENSG00000267321.3] WARNING, no entry stored in dbm for [ENSG00000233963.2] WARNING, no entry stored in dbm for [ENSG00000237004.4] WARNING, no entry stored in dbm for [ENSG00000237004.4] WARNING, no entry stored in dbm for [ENSG00000227671.4] WARNING, no entry stored in dbm for [ENSG00000233527.9] WARNING, no entry stored in dbm for [ENSG00000267871.6] WARNING, no entry stored in dbm for [ENSG00000248406.1] WARNING, no entry stored in dbm for [ENSG00000233987.2] WARNING, no entry stored in dbm for [ENSG00000234420.7] WARNING, no entry stored in dbm for [ENSG00000173209.23] WARNING, no entry stored in dbm for [ENSG00000214176.9] WARNING, no entry stored in dbm for [ENSG00000286562.1] WARNING, no entry stored in dbm for [ENSG00000283692.2] WARNING, no entry stored in dbm for [ENSG00000232346.1] WARNING, no entry stored in dbm for [ENSG00000243287.2] WARNING, no entry stored in dbm for [ENSG00000267767.3] WARNING, no entry stored in dbm for [ENSG00000229386.3] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000219703.1] WARNING, no entry stored in dbm for [ENSG00000250358.6] WARNING, no entry stored in dbm for [ENSG00000262539.1] WARNING, no entry stored in dbm for [ENSG00000228065.11] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000276563.1] WARNING, no entry stored in dbm for [ENSG00000241656.1] WARNING, no entry stored in dbm for [ENSG00000263563.6] WARNING, no entry stored in dbm for [ENSG00000235782.1] WARNING, no entry stored in dbm for [ENSG00000283480.1] WARNING, no entry stored in dbm for [ENSG00000218274.2] WARNING, no entry stored in dbm for [ENSG00000180438.15] WARNING, no entry stored in dbm for [ENSG00000224401.2] WARNING, no entry stored in dbm for [ENSG00000213650.3] WARNING, no entry stored in dbm for [ENSG00000254860.6] WARNING, no entry stored in dbm for [ENSG00000259737.7] WARNING, no entry stored in dbm for [ENSG00000228414.7] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000266904.6] WARNING, no entry stored in dbm for [ENSG00000279243.3] WARNING, no entry stored in dbm for [ENSG00000225096.3] WARNING, no entry stored in dbm for [ENSG00000242294.6] WARNING, no entry stored in dbm for [ENSG00000261143.1] WARNING, no entry stored in dbm for [ENSG00000226688.7] WARNING, no entry stored in dbm for [ENSG00000270791.1] WARNING, no entry stored in dbm for [ENSG00000266433.6] WARNING, no entry stored in dbm for [ENSG00000227733.10] WARNING, no entry stored in dbm for [ENSG00000242207.1] WARNING, no entry stored in dbm for [ENSG00000263934.5] WARNING, no entry stored in dbm for [ENSG00000204387.14] WARNING, no entry stored in dbm for [ENSG00000228649.9] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000270344.3] WARNING, no entry stored in dbm for [ENSG00000267023.5] WARNING, no entry stored in dbm for [ENSG00000225138.8] WARNING, no entry stored in dbm for [ENSG00000285051.2] WARNING, no entry stored in dbm for [ENSG00000260102.2] WARNING, no entry stored in dbm for [ENSG00000204054.14] WARNING, no entry stored in dbm for [ENSG00000227769.7] WARNING, no entry stored in dbm for [ENSG00000269900.3] WARNING, no entry stored in dbm for [ENSG00000182048.11] WARNING, no entry stored in dbm for [ENSG00000232748.3] WARNING, no entry stored in dbm for [ENSG00000186543.7] WARNING, no entry stored in dbm for [ENSG00000250813.1] WARNING, no entry stored in dbm for [ENSG00000253541.1] WARNING, no entry stored in dbm for [ENSG00000260487.1] WARNING, no entry stored in dbm for [ENSG00000230551.4] WARNING, no entry stored in dbm for [ENSG00000196204.12] WARNING, no entry stored in dbm for [ENSG00000215837.7] WARNING, no entry stored in dbm for [ENSG00000253903.2] WARNING, no entry stored in dbm for [ENSG00000236107.10] WARNING, no entry stored in dbm for [ENSG00000247708.8] WARNING, no entry stored in dbm for [ENSG00000240405.7] WARNING, no entry stored in dbm for [ENSG00000250412.1] WARNING, no entry stored in dbm for [ENSG00000210184.1] WARNING, no entry stored in dbm for [ENSG00000225482.1] WARNING, no entry stored in dbm for [ENSG00000239881.1] WARNING, no entry stored in dbm for [ENSG00000228665.2] WARNING, no entry stored in dbm for [ENSG00000186615.11] WARNING, no entry stored in dbm for [ENSG00000238183.2] WARNING, no entry stored in dbm for [ENSG00000231366.1] WARNING, no entry stored in dbm for [ENSG00000234513.1] WARNING, no entry stored in dbm for [ENSG00000240427.1] WARNING, no entry stored in dbm for [ENSG00000233778.3] WARNING, no entry stored in dbm for [ENSG00000254260.1] WARNING, no entry stored in dbm for [ENSG00000213495.3] WARNING, no entry stored in dbm for [ENSG00000225912.1] WARNING, no entry stored in dbm for [ENSG00000213495.3] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000237529.2] WARNING, no entry stored in dbm for [ENSG00000233718.8] WARNING, no entry stored in dbm for [ENSG00000239437.3] WARNING, no entry stored in dbm for [ENSG00000244642.3] WARNING, no entry stored in dbm for [ENSG00000233673.7] WARNING, no entry stored in dbm for [ENSG00000224896.2] WARNING, no entry stored in dbm for [ENSG00000261051.1] WARNING, no entry stored in dbm for [ENSG00000206593.1] WARNING, no entry stored in dbm for [ENSG00000236039.3] WARNING, no entry stored in dbm for [ENSG00000253734.2] WARNING, no entry stored in dbm for [ENSG00000234389.1] WARNING, no entry stored in dbm for [ENSG00000274993.1] WARNING, no entry stored in dbm for [ENSG00000273125.2] WARNING, no entry stored in dbm for [ENSG00000225470.8] WARNING, no entry stored in dbm for [ENSG00000237000.1] WARNING, no entry stored in dbm for [ENSG00000197744.5] WARNING, no entry stored in dbm for [ENSG00000239911.2] WARNING, no entry stored in dbm for [ENSG00000245888.7] WARNING, no entry stored in dbm for [ENSG00000228623.6] WARNING, no entry stored in dbm for [ENSG00000214975.4] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000224477.5] WARNING, no entry stored in dbm for [ENSG00000232104.3] WARNING, no entry stored in dbm for [ENSG00000288011.1] WARNING, no entry stored in dbm for [ENSG00000253789.1] WARNING, no entry stored in dbm for [ENSG00000275874.1] WARNING, no entry stored in dbm for [ENSG00000248290.1] WARNING, no entry stored in dbm for [ENSG00000285737.1] WARNING, no entry stored in dbm for [ENSG00000287309.1] WARNING, no entry stored in dbm for [ENSG00000272150.5] WARNING, no entry stored in dbm for [ENSG00000225856.2] WARNING, no entry stored in dbm for [ENSG00000265369.3] WARNING, no entry stored in dbm for [ENSG00000189223.15] WARNING, no entry stored in dbm for [ENSG00000223482.8] WARNING, no entry stored in dbm for [ENSG00000260005.6] WARNING, no entry stored in dbm for [ENSG00000245954.8] WARNING, no entry stored in dbm for [ENSG00000287338.1] WARNING, no entry stored in dbm for [ENSG00000274487.2] WARNING, no entry stored in dbm for [ENSG00000234741.8] WARNING, no entry stored in dbm for [ENSG00000239523.6] WARNING, no entry stored in dbm for [ENSG00000236051.7] WARNING, no entry stored in dbm for [ENSG00000236051.7] WARNING, no entry stored in dbm for [ENSG00000228323.2] WARNING, no entry stored in dbm for [ENSG00000224722.3] WARNING, no entry stored in dbm for [ENSG00000263677.2] WARNING, no entry stored in dbm for [ENSG00000210127.1] WARNING, no entry stored in dbm for [ENSG00000198786.2] WARNING, no entry stored in dbm for [ENSG00000198804.2] WARNING, no entry stored in dbm for [ENSG00000207569.2] WARNING, no entry stored in dbm for [ENSG00000249328.3] WARNING, no entry stored in dbm for [ENSG00000235989.4] WARNING, no entry stored in dbm for [ENSG00000205611.5] WARNING, no entry stored in dbm for [ENSG00000224020.1] WARNING, no entry stored in dbm for [ENSG00000272690.6] WARNING, no entry stored in dbm for [ENSG00000225746.13] WARNING, no entry stored in dbm for [ENSG00000214548.18] WARNING, no entry stored in dbm for [ENSG00000214548.18] WARNING, no entry stored in dbm for [ENSG00000248309.7] WARNING, no entry stored in dbm for [ENSG00000242326.1] WARNING, no entry stored in dbm for [ENSG00000244313.3] WARNING, no entry stored in dbm for [ENSG00000283132.1] WARNING, no entry stored in dbm for [ENSG00000224186.8] WARNING, no entry stored in dbm for [ENSG00000286596.1] WARNING, no entry stored in dbm for [ENSG00000286295.1] WARNING, no entry stored in dbm for [ENSG00000248323.7] WARNING, no entry stored in dbm for [ENSG00000233836.7] WARNING, no entry stored in dbm for [ENSG00000231964.1] WARNING, no entry stored in dbm for [ENSG00000250754.6] WARNING, no entry stored in dbm for [ENSG00000206187.4] WARNING, no entry stored in dbm for [ENSG00000281903.2] WARNING, no entry stored in dbm for [ENSG00000250125.4] WARNING, no entry stored in dbm for [ENSG00000224153.3] WARNING, no entry stored in dbm for [ENSG00000262188.2] WARNING, no entry stored in dbm for [ENSG00000235493.2] WARNING, no entry stored in dbm for [ENSG00000279579.3] WARNING, no entry stored in dbm for [ENSG00000260976.2] WARNING, no entry stored in dbm for [ENSG00000198685.4] WARNING, no entry stored in dbm for [ENSG00000198685.4] WARNING, no entry stored in dbm for [ENSG00000247213.7] WARNING, no entry stored in dbm for [ENSG00000260468.1] WARNING, no entry stored in dbm for [ENSG00000247157.7] WARNING, no entry stored in dbm for [ENSG00000245937.8] WARNING, no entry stored in dbm for [ENSG00000228794.10] WARNING, no entry stored in dbm for [ENSG00000235703.6] WARNING, no entry stored in dbm for [ENSG00000232677.9] WARNING, no entry stored in dbm for [ENSG00000258279.4] WARNING, no entry stored in dbm for [ENSG00000175611.12] WARNING, no entry stored in dbm for [ENSG00000180229.12] WARNING, no entry stored in dbm for [ENSG00000179406.8] WARNING, no entry stored in dbm for [ENSG00000237854.3] WARNING, no entry stored in dbm for [ENSG00000233008.6] WARNING, no entry stored in dbm for [ENSG00000233930.4] WARNING, no entry stored in dbm for [ENSG00000286948.1] WARNING, no entry stored in dbm for [ENSG00000239569.3] WARNING, no entry stored in dbm for [ENSG00000217648.1] WARNING, no entry stored in dbm for [ENSG00000224717.1] WARNING, no entry stored in dbm for [ENSG00000245750.10] WARNING, no entry stored in dbm for [ENSG00000237978.6] WARNING, no entry stored in dbm for [ENSG00000232788.1] WARNING, no entry stored in dbm for [ENSG00000283923.1] WARNING, no entry stored in dbm for [ENSG00000259673.6] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000197301.7] WARNING, no entry stored in dbm for [ENSG00000206341.7] WARNING, no entry stored in dbm for [ENSG00000225851.1] WARNING, no entry stored in dbm for [ENSG00000248205.1] WARNING, no entry stored in dbm for [ENSG00000234945.8] WARNING, no entry stored in dbm for [ENSG00000226002.1] WARNING, no entry stored in dbm for [ENSG00000227113.2] WARNING, no entry stored in dbm for [ENSG00000218803.1] WARNING, no entry stored in dbm for [ENSG00000251022.6] WARNING, no entry stored in dbm for [ENSG00000257621.8] WARNING, no entry stored in dbm for [ENSG00000250959.2] WARNING, no entry stored in dbm for [ENSG00000237125.11] WARNING, no entry stored in dbm for [ENSG00000163597.15] WARNING, no entry stored in dbm for [ENSG00000230590.11] WARNING, no entry stored in dbm for [ENSG00000275906.1] WARNING, no entry stored in dbm for [ENSG00000254932.2] WARNING, no entry stored in dbm for [ENSG00000237424.1] WARNING, no entry stored in dbm for [ENSG00000284699.1] WARNING, no entry stored in dbm for [ENSG00000204091.8] WARNING, no entry stored in dbm for [ENSG00000225969.2] WARNING, no entry stored in dbm for [ENSG00000274265.5] WARNING, no entry stored in dbm for [ENSG00000183666.17] WARNING, no entry stored in dbm for [ENSG00000205890.3] WARNING, no entry stored in dbm for [ENSG00000224722.3] WARNING, no entry stored in dbm for [ENSG00000264044.1] WARNING, no entry stored in dbm for [ENSG00000234690.7] WARNING, no entry stored in dbm for [ENSG00000237505.8] WARNING, no entry stored in dbm for [ENSG00000234152.1] WARNING, no entry stored in dbm for [ENSG00000273301.1] WARNING, no entry stored in dbm for [ENSG00000224775.2] WARNING, no entry stored in dbm for [ENSG00000257790.1] WARNING, no entry stored in dbm for [ENSG00000231018.1] WARNING, no entry stored in dbm for [ENSG00000179523.5] WARNING, no entry stored in dbm for [ENSG00000238755.3] WARNING, no entry stored in dbm for [ENSG00000276710.4] WARNING, no entry stored in dbm for [ENSG00000238171.1] WARNING, no entry stored in dbm for [ENSG00000186704.9] WARNING, no entry stored in dbm for [ENSG00000231607.13] WARNING, no entry stored in dbm for [ENSG00000261279.5] WARNING, no entry stored in dbm for [ENSG00000233110.1] WARNING, no entry stored in dbm for [ENSG00000232354.8] WARNING, no entry stored in dbm for [ENSG00000237372.4] WARNING, no entry stored in dbm for [ENSG00000271162.1] WARNING, no entry stored in dbm for [ENSG00000234466.1] WARNING, no entry stored in dbm for [ENSG00000236417.2] WARNING, no entry stored in dbm for [ENSG00000255319.5] WARNING, no entry stored in dbm for [ENSG00000244618.3] WARNING, no entry stored in dbm for [ENSG00000215908.10] WARNING, no entry stored in dbm for [ENSG00000246695.8] WARNING, no entry stored in dbm for [ENSG00000184441.4] WARNING, no entry stored in dbm for [ENSG00000279066.1] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000168405.17] WARNING, no entry stored in dbm for [ENSG00000168405.17] WARNING, no entry stored in dbm for [ENSG00000217896.2] WARNING, no entry stored in dbm for [ENSG00000232000.3] WARNING, no entry stored in dbm for [ENSG00000285492.1] WARNING, no entry stored in dbm for [ENSG00000283597.3] WARNING, no entry stored in dbm for [ENSG00000287077.1] WARNING, no entry stored in dbm for [ENSG00000225760.2] WARNING, no entry stored in dbm for [ENSG00000249684.6] WARNING, no entry stored in dbm for [ENSG00000222328.1] WARNING, no entry stored in dbm for [ENSG00000226906.1] WARNING, no entry stored in dbm for [ENSG00000228409.6] WARNING, no entry stored in dbm for [ENSG00000232624.8] WARNING, no entry stored in dbm for [ENSG00000230285.1] WARNING, no entry stored in dbm for [ENSG00000267065.2] WARNING, no entry stored in dbm for [ENSG00000286391.1] WARNING, no entry stored in dbm for [ENSG00000206228.4] WARNING, no entry stored in dbm for [ENSG00000223896.2] WARNING, no entry stored in dbm for [ENSG00000263072.8] WARNING, no entry stored in dbm for [ENSG00000228697.4] WARNING, no entry stored in dbm for [ENSG00000204959.4] WARNING, no entry stored in dbm for [ENSG00000245275.8] WARNING, no entry stored in dbm for [ENSG00000251291.2] WARNING, no entry stored in dbm for [ENSG00000240535.8] WARNING, no entry stored in dbm for [ENSG00000280424.1] WARNING, no entry stored in dbm for [ENSG00000216657.1] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000271524.1] WARNING, no entry stored in dbm for [ENSG00000261351.2] WARNING, no entry stored in dbm for [ENSG00000224599.1] WARNING, no entry stored in dbm for [ENSG00000254560.6] WARNING, no entry stored in dbm for [ENSG00000287671.1] WARNING, no entry stored in dbm for [ENSG00000269927.1] WARNING, no entry stored in dbm for [ENSG00000235550.1] WARNING, no entry stored in dbm for [ENSG00000227745.1] WARNING, no entry stored in dbm for [ENSG00000220517.2] WARNING, no entry stored in dbm for [ENSG00000271147.8] WARNING, no entry stored in dbm for [ENSG00000244198.7] WARNING, no entry stored in dbm for [ENSG00000204959.4] WARNING, no entry stored in dbm for [ENSG00000250111.3] WARNING, no entry stored in dbm for [ENSG00000266602.2] WARNING, no entry stored in dbm for [ENSG00000251143.1] WARNING, no entry stored in dbm for [ENSG00000251143.1] WARNING, no entry stored in dbm for [ENSG00000251143.1] WARNING, no entry stored in dbm for [ENSG00000251143.1] WARNING, no entry stored in dbm for [ENSG00000255380.1] WARNING, no entry stored in dbm for [ENSG00000264964.2] WARNING, no entry stored in dbm for [ENSG00000226043.2] WARNING, no entry stored in dbm for [ENSG00000228980.4] WARNING, no entry stored in dbm for [ENSG00000232601.1] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000230021.10] WARNING, no entry stored in dbm for [ENSG00000286502.1] WARNING, no entry stored in dbm for [ENSG00000270780.1] WARNING, no entry stored in dbm for [ENSG00000233928.6] WARNING, no entry stored in dbm for [ENSG00000236021.2] WARNING, no entry stored in dbm for [ENSG00000285079.1] WARNING, no entry stored in dbm for [ENSG00000227619.3] WARNING, no entry stored in dbm for [ENSG00000287782.1] WARNING, no entry stored in dbm for [ENSG00000231970.1] WARNING, no entry stored in dbm for [ENSG00000217786.1] WARNING, no entry stored in dbm for [ENSG00000259723.1] WARNING, no entry stored in dbm for [ENSG00000246203.2] WARNING, no entry stored in dbm for [ENSG00000286699.1] WARNING, no entry stored in dbm for [ENSG00000165121.11] WARNING, no entry stored in dbm for [ENSG00000165121.11] WARNING, no entry stored in dbm for [ENSG00000228430.9] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000259049.1] WARNING, no entry stored in dbm for [ENSG00000242888.1] WARNING, no entry stored in dbm for [ENSG00000276805.2] WARNING, no entry stored in dbm for [ENSG00000235122.4] WARNING, no entry stored in dbm for [ENSG00000216775.3] WARNING, no entry stored in dbm for [ENSG00000261116.1] WARNING, no entry stored in dbm for [ENSG00000280184.2] WARNING, no entry stored in dbm for [ENSG00000215022.7] WARNING, no entry stored in dbm for [ENSG00000215022.7] WARNING, no entry stored in dbm for [ENSG00000231165.3] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000241473.1] WARNING, no entry stored in dbm for [ENSG00000235499.1] WARNING, no entry stored in dbm for [ENSG00000227627.3] WARNING, no entry stored in dbm for [ENSG00000276216.1] WARNING, no entry stored in dbm for [ENSG00000277702.1] WARNING, no entry stored in dbm for [ENSG00000276298.1] WARNING, no entry stored in dbm for [ENSG00000242073.2] WARNING, no entry stored in dbm for [ENSG00000230638.4] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000214135.8] WARNING, no entry stored in dbm for [ENSG00000255992.1] WARNING, no entry stored in dbm for [ENSG00000254860.6] WARNING, no entry stored in dbm for [ENSG00000285668.1] WARNING, no entry stored in dbm for [ENSG00000260971.4] WARNING, no entry stored in dbm for [ENSG00000241473.1] WARNING, no entry stored in dbm for [ENSG00000229349.2] WARNING, no entry stored in dbm for [ENSG00000259692.6] WARNING, no entry stored in dbm for [ENSG00000260236.1] WARNING, no entry stored in dbm for [ENSG00000251378.1] WARNING, no entry stored in dbm for [ENSG00000280219.1] WARNING, no entry stored in dbm for [ENSG00000249741.2] WARNING, no entry stored in dbm for [ENSG00000287031.1] WARNING, no entry stored in dbm for [ENSG00000286759.1] WARNING, no entry stored in dbm for [ENSG00000284428.1] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000248126.1] WARNING, no entry stored in dbm for [ENSG00000240519.1] WARNING, no entry stored in dbm for [ENSG00000265936.1] WARNING, no entry stored in dbm for [ENSG00000214259.3] WARNING, no entry stored in dbm for [ENSG00000244953.1] WARNING, no entry stored in dbm for [ENSG00000227210.2] WARNING, no entry stored in dbm for [ENSG00000259605.3] WARNING, no entry stored in dbm for [ENSG00000253107.1] WARNING, no entry stored in dbm for [ENSG00000259605.3] WARNING, no entry stored in dbm for [ENSG00000253107.1] WARNING, no entry stored in dbm for [ENSG00000248206.2] WARNING, no entry stored in dbm for [ENSG00000285567.2] WARNING, no entry stored in dbm for [ENSG00000273257.2] WARNING, no entry stored in dbm for [ENSG00000287188.1] WARNING, no entry stored in dbm for [ENSG00000257337.7] WARNING, no entry stored in dbm for [ENSG00000240535.8] WARNING, no entry stored in dbm for [ENSG00000185641.6] WARNING, no entry stored in dbm for [ENSG00000261386.2] WARNING, no entry stored in dbm for [ENSG00000223703.1] WARNING, no entry stored in dbm for [ENSG00000223703.1] WARNING, no entry stored in dbm for [ENSG00000263766.5] WARNING, no entry stored in dbm for [ENSG00000250764.1] WARNING, no entry stored in dbm for [ENSG00000250764.1] WARNING, no entry stored in dbm for [ENSG00000274461.2] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000242338.6] WARNING, no entry stored in dbm for [ENSG00000247934.4] WARNING, no entry stored in dbm for [ENSG00000287858.1] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000231189.1] WARNING, no entry stored in dbm for [ENSG00000186148.13] WARNING, no entry stored in dbm for [ENSG00000186076.5] WARNING, no entry stored in dbm for [ENSG00000257453.1] WARNING, no entry stored in dbm for [ENSG00000197813.6] WARNING, no entry stored in dbm for [ENSG00000277171.1] WARNING, no entry stored in dbm for [ENSG00000272702.1] WARNING, no entry stored in dbm for [ENSG00000268119.6] WARNING, no entry stored in dbm for [ENSG00000111788.10] WARNING, no entry stored in dbm for [ENSG00000286797.1] WARNING, no entry stored in dbm for [ENSG00000279803.1] WARNING, no entry stored in dbm for [ENSG00000279991.1] WARNING, no entry stored in dbm for [ENSG00000260905.1] WARNING, no entry stored in dbm for [ENSG00000284671.1] WARNING, no entry stored in dbm for [ENSG00000260482.3] WARNING, no entry stored in dbm for [ENSG00000279300.1] WARNING, no entry stored in dbm for [ENSG00000271150.1] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000213238.6] WARNING, no entry stored in dbm for [ENSG00000283041.1] WARNING, no entry stored in dbm for [ENSG00000267009.6] WARNING, no entry stored in dbm for [ENSG00000224415.1] WARNING, no entry stored in dbm for [ENSG00000233028.1] WARNING, no entry stored in dbm for [ENSG00000283214.1] WARNING, no entry stored in dbm for [ENSG00000266869.2] WARNING, no entry stored in dbm for [ENSG00000268723.1] WARNING, no entry stored in dbm for [ENSG00000287409.1] WARNING, no entry stored in dbm for [ENSG00000254610.3] WARNING, no entry stored in dbm for [ENSG00000248618.1] WARNING, no entry stored in dbm for [ENSG00000287643.1] WARNING, no entry stored in dbm for [ENSG00000286423.1] WARNING, no entry stored in dbm for [ENSG00000277283.1] WARNING, no entry stored in dbm for [ENSG00000280054.1] WARNING, no entry stored in dbm for [ENSG00000228113.7] WARNING, no entry stored in dbm for [ENSG00000278922.1] WARNING, no entry stored in dbm for [ENSG00000251595.7] * STAR-Fusion complete. See output: /tmp/nxf.SJCAxqNKsu/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)