.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (aih-tih-sc-be4b28-R1_B23WHYVLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/90/48fe165d46a30858ccabb6a8377325/.command.log
Size: 716 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (aih-tih-sc-be4b28-R1_B23WHYVLT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/90/48fe165d46a30858ccabb6a8377325/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/48e073d63a94693dd7f1f41ffdc762/aih-tih-sc-be4b28-R1_B23WHYVLT4_1.md.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/90/48fe165d46a30858ccabb6a8377325/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/48e073d63a94693dd7f1f41ffdc762/aih-tih-sc-be4b28-R1_B23WHYVLT4_1.md.bai
==> STAGING COMPLETE (4 inputs)

+ seqtool saturation -region chr20 aih-tih-sc-be4b28-R1_B23WHYVLT4_1.md.bam
[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-be4b28-R1_B23WHYVLT4_1.md.bai