Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cc/d01d620ee5501a5bfb707213df0130/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/9c5736f9c8abfd82971a210e994225/aih-tih-sc-1d89ab-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cc/d01d620ee5501a5bfb707213df0130/.command.run
==> STAGING COMPLETE (3 inputs)

PAIRED_END_BAM_INPUT
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paired = 291307784
unpaired = 5658575
MERGED PAIRED END READS = 291307784
MATES PROCESSED = 588274143
TOTAL READS     = 296966359
DISTINCT READS  = 1.05218e+08
DISTINCT COUNTS = 1545
MAX COUNT       = 1311626
COUNTS OF 1     = 4.49657e+07
MAX TERMS       = 100
OBSERVED COUNTS (1311627)
1	44965707
2	24455409
3	13880758
4	7934915
5	4628184
6	2788995
7	1751693
8	1147367
9	784656
10	553782
11	406527
12	304933
13	234243
14	184150
15	146996
16	119887
17	98189
18	81470
19	69349
20	59189
21	51036
22	44578
23	38820
24	34373
25	30581
26	27094
27	24201
28	22090
29	19875
30	17883
31	16464
32	15006
33	13821
34	12777
35	11757
36	10882
37	9734
38	9291
39	8534
40	8185
41	7512
42	7077
43	6636
44	6200
45	5843
46	5548
47	5180
48	4912
49	4739
50	4413
51	4225
52	4040
53	3746
54	3528
55	3480
56	3411
57	3166
58	3008
59	2749
60	2798
61	2666
62	2595
63	2386
64	2389
65	2215
66	2139
67	1929
68	2013
69	1900
70	1849
71	1851
72	1775
73	1596
74	1615
75	1576
76	1416
77	1479
78	1375
79	1366
80	1360
81	1246
82	1279
83	1171
84	1103
85	1074
86	1098
87	1041
88	1012
89	996
90	960
91	971
92	971
93	885
94	806
95	833
96	742
97	813
98	777
99	804
100	784
101	741
102	690
103	709
104	615
105	618
106	630
107	614
108	593
109	599
110	578
111	559
112	591
113	525
114	506
115	508
116	505
117	441
118	476
119	471
120	476
121	448
122	452
123	452
124	380
125	403
126	445
127	405
128	387
129	386
130	369
131	378
132	366
133	360
134	314
135	373
136	360
137	316
138	317
139	292
140	335
141	302
142	298
143	299
144	277
145	285
146	321
147	264
148	275
149	270
150	263
151	262
152	248
153	239
154	257
155	229
156	228
157	251
158	240
159	234
160	212
161	248
162	190
163	191
164	208
165	200
166	181
167	187
168	214
169	184
170	173
171	177
172	176
173	179
174	175
175	193
176	160
177	175
178	202
179	173
180	152
181	150
182	139
183	130
184	144
185	141
186	151
187	151
188	140
189	119
190	136
191	140
192	133
193	140
194	135
195	147
196	143
197	117
198	127
199	124
200	117
201	149
202	116
203	129
204	135
205	131
206	115
207	113
208	116
209	138
210	114
211	120
212	100
213	115
214	98
215	94
216	105
217	96
218	116
219	91
220	87
221	92
222	97
223	94
224	93
225	77
226	94
227	98
228	110
229	90
230	95
231	100
232	76
233	83
234	92
235	87
236	75
237	85
238	91
239	84
240	75
241	66
242	62
243	85
244	80
245	68
246	76
247	77
248	66
249	66
250	60
251	62
252	52
253	66
254	57
255	53
256	79
257	59
258	70
259	59
260	59
261	74
262	75
263	51
264	66
265	54
266	59
267	65
268	59
269	57
270	59
271	40
272	55
273	59
274	64
275	63
276	35
277	45
278	50
279	54
280	38
281	50
282	46
283	45
284	50
285	57
286	53
287	62
288	41
289	49
290	41
291	40
292	44
293	45
294	53
295	38
296	42
297	38
298	42
299	46
300	39
301	35
302	37
303	43
304	33
305	46
306	53
307	46
308	44
309	33
310	41
311	51
312	34
313	37
314	36
315	27
316	35
317	31
318	37
319	35
320	41
321	35
322	43
323	43
324	35
325	26
326	27
327	35
328	31
329	37
330	27
331	40
332	25
333	29
334	28
335	33
336	32
337	36
338	39
339	27
340	36
341	22
342	39
343	32
344	31
345	24
346	26
347	29
348	27
349	30
350	34
351	28
352	31
353	28
354	27
355	28
356	31
357	20
358	35
359	28
360	23
361	20
362	34
363	27
364	21
365	21
366	29
367	13
368	25
369	27
370	29
371	16
372	33
373	17
374	26
375	18
376	22
377	16
378	20
379	35
380	22
381	26
382	26
383	26
384	24
385	17
386	15
387	25
388	18
389	14
390	24
391	17
392	18
393	18
394	21
395	12
396	30
397	25
398	24
399	26
400	28
401	19
402	18
403	22
404	23
405	16
406	23
407	31
408	18
409	19
410	17
411	22
412	18
413	22
414	11
415	14
416	12
417	20
418	21
419	20
420	19
421	17
422	15
423	20
424	16
425	13
426	18
427	25
428	13
429	16
430	20
431	16
432	14
433	15
434	9
435	16
436	21
437	21
438	12
439	12
440	16
441	11
442	17
443	13
444	11
445	17
446	14
447	11
448	14
449	18
450	16
451	14
452	11
453	16
454	10
455	15
456	18
457	10
458	11
459	18
460	16
461	14
462	14
463	15
464	10
465	13
466	11
467	13
468	14
469	14
470	13
471	14
472	13
473	9
474	16
475	16
476	14
477	9
478	12
479	10
480	17
481	16
482	12
483	7
484	12
485	19
486	13
487	14
488	14
489	10
490	12
491	16
492	9
493	7
494	15
495	12
496	14
497	12
498	11
499	12
500	5
501	21
502	3
503	11
504	21
505	10
506	5
507	11
508	8
509	9
510	10
511	16
512	15
513	7
514	9
515	5
516	10
517	10
518	9
519	10
520	13
521	14
522	8
523	13
524	11
525	11
526	10
527	10
528	11
529	9
530	11
531	10
532	11
533	7
534	7
535	8
536	5
537	9
538	10
539	4
540	14
541	7
542	4
543	7
544	9
545	4
546	6
547	14
548	9
549	8
550	11
551	5
552	8
553	11
554	9
555	12
556	8
557	11
558	9
559	16
560	2
561	11
562	7
563	6
564	5
565	3
566	8
567	6
568	6
569	7
570	3
571	7
572	4
573	7
574	7
575	4
576	6
577	4
578	4
579	3
580	5
581	6
582	6
583	7
584	6
585	6
586	7
587	9
588	12
589	15
590	10
591	6
592	8
593	7
594	6
595	6
596	5
597	7
598	7
599	7
600	7
601	4
602	5
603	3
604	8
605	11
606	2
607	10
608	6
609	10
610	6
611	7
612	5
613	5
614	4
615	12
616	6
617	5
618	7
619	6
620	8
621	7
622	7
623	5
624	5
625	10
626	5
627	7
628	6
629	7
630	9
631	4
632	7
633	5
634	7
635	4
636	6
637	5
638	9
639	5
640	6
641	5
642	2
643	5
644	12
645	8
646	6
647	11
648	6
649	5
650	7
651	8
652	6
653	6
654	1
655	7
656	5
657	6
658	4
659	2
660	5
661	7
662	3
663	5
664	8
665	6
666	9
667	6
668	3
669	4
670	7
671	4
672	9
673	3
674	4
675	5
676	5
677	3
678	4
679	4
680	6
681	5
682	6
683	4
684	5
685	7
686	2
687	8
688	6
689	5
690	5
691	2
692	6
693	5
694	5
695	5
696	4
697	3
698	2
699	6
700	4
701	5
702	6
703	6
704	1
705	2
706	2
707	6
708	4
709	5
710	8
711	4
712	1
713	2
714	3
715	5
716	7
717	1
718	8
719	5
720	7
721	2
722	8
723	3
724	7
725	5
726	3
727	4
728	5
729	4
731	4
732	2
733	3
734	5
735	1
736	5
737	2
738	3
739	3
740	5
741	3
742	3
743	7
744	4
745	4
746	1
747	1
748	3
749	1
750	3
751	5
752	3
753	2
754	3
755	2
756	8
757	4
758	4
759	1
760	4
761	1
762	5
763	4
764	5
765	6
766	4
767	3
768	3
769	2
770	1
771	6
772	3
773	7
774	2
775	2
776	2
777	2
778	3
779	3
780	2
781	4
782	2
783	2
784	2
785	3
786	3
787	4
788	2
789	3
790	7
792	2
793	1
794	3
795	1
796	4
797	1
798	6
799	5
800	3
802	2
803	2
804	1
805	2
806	1
807	2
808	5
809	1
810	2
811	4
812	4
814	5
815	4
816	3
817	1
818	4
819	3
822	1
823	5
824	2
825	2
826	1
827	2
828	1
829	3
830	2
831	4
832	4
833	3
834	2
835	1
836	3
837	2
838	2
839	2
840	6
841	1
842	4
843	6
844	2
845	1
846	1
847	5
849	2
850	3
851	4
852	2
853	3
854	2
855	2
856	2
857	1
858	4
859	2
860	2
861	1
862	4
863	2
865	4
866	7
868	3
869	2
870	3
871	2
872	3
873	1
874	4
876	1
877	3
878	2
879	3
880	1
882	2
883	2
884	3
885	2
886	2
887	1
888	1
889	1
890	3
891	1
892	3
893	2
894	2
895	3
896	1
897	3
898	2
899	1
901	3
902	3
903	2
904	1
905	4
906	3
907	3
908	1
909	2
910	3
911	2
912	1
913	4
914	3
915	1
916	1
917	2
918	1
919	2
920	3
921	1
922	2
923	1
924	2
925	1
927	1
928	4
929	1
930	1
932	2
933	2
934	4
935	1
936	2
937	2
938	2
939	3
941	2
942	1
943	1
944	3
945	3
946	1
947	3
949	1
950	3
951	3
953	2
954	1
955	1
956	4
957	3
958	1
960	2
961	2
962	3
963	2
965	1
966	2
968	2
969	3
970	3
971	2
972	1
974	1
976	1
977	1
979	2
980	1
981	1
983	3
984	1
985	2
987	1
988	3
990	2
992	2
993	1
994	3
995	2
996	1
997	3
998	1
999	2
1001	1
1002	3
1004	2
1005	2
1006	3
1007	1
1008	2
1009	2
1010	1
1011	2
1012	2
1013	3
1014	1
1015	2
1016	1
1018	1
1019	3
1021	1
1023	3
1024	3
1025	1
1026	1
1027	2
1028	1
1029	1
1030	2
1032	1
1033	1
1034	2
1036	1
1038	2
1039	2
1040	1
1041	2
1042	5
1044	2
1045	4
1046	3
1048	1
1049	1
1050	3
1053	1
1059	4
1060	2
1061	1
1063	2
1064	4
1065	1
1067	1
1068	1
1070	2
1071	2
1072	3
1073	1
1074	2
1075	2
1076	2
1077	2
1078	1
1079	2
1081	1
1082	4
1083	1
1084	3
1085	2
1086	2
1087	2
1088	1
1089	1
1090	2
1091	2
1093	3
1095	2
1096	2
1098	1
1103	2
1105	2
1106	2
1107	2
1108	2
1114	1
1115	3
1117	1
1118	1
1121	1
1122	1
1123	1
1124	1
1129	1
1130	1
1131	2
1133	1
1134	1
1135	5
1136	2
1137	2
1138	1
1140	1
1143	1
1144	1
1145	2
1146	2
1148	1
1151	2
1152	1
1153	3
1154	2
1156	1
1157	2
1158	1
1159	1
1162	1
1165	1
1166	1
1170	2
1171	3
1172	2
1173	2
1175	2
1176	1
1177	3
1178	1
1179	1
1180	2
1181	1
1183	2
1187	2
1189	2
1190	1
1191	1
1194	3
1196	1
1197	2
1199	1
1200	3
1201	2
1202	1
1203	1
1205	1
1206	1
1208	1
1210	1
1212	1
1213	1
1214	1
1216	1
1217	1
1218	1
1219	1
1222	1
1223	1
1224	1
1227	1
1228	1
1230	1
1234	1
1236	1
1237	2
1238	1
1239	2
1240	1
1241	1
1242	1
1243	1
1244	2
1247	1
1248	1
1249	1
1251	1
1252	1
1253	1
1255	2
1256	1
1257	1
1259	1
1261	1
1262	1
1263	2
1265	1
1270	2
1271	1
1273	3
1274	1
1275	1
1278	1
1279	1
1280	2
1281	2
1283	1
1284	2
1285	1
1287	1
1288	1
1289	1
1294	1
1296	1
1297	1
1299	3
1301	1
1305	1
1306	1
1307	1
1308	1
1309	1
1310	3
1314	1
1315	3
1316	2
1317	2
1318	1
1323	1
1325	1
1327	1
1328	1
1330	1
1337	1
1338	1
1340	2
1342	1
1344	1
1345	1
1346	1
1348	1
1351	1
1352	1
1354	1
1355	1
1358	1
1359	1
1362	1
1364	1
1366	1
1368	1
1370	2
1372	1
1373	3
1379	1
1382	1
1384	1
1386	2
1390	1
1392	1
1395	2
1398	1
1399	1
1401	1
1402	1
1404	3
1405	1
1409	1
1415	1
1418	1
1421	1
1425	3
1427	2
1430	1
1432	1
1433	1
1436	2
1439	1
1441	1
1444	1
1445	1
1449	1
1451	1
1452	1
1453	2
1462	1
1467	2
1468	1
1469	1
1470	2
1473	1
1474	2
1475	2
1477	1
1479	2
1481	1
1482	1
1485	2
1488	3
1494	1
1497	1
1499	1
1501	1
1502	1
1503	1
1504	2
1508	1
1514	1
1516	1
1518	1
1520	1
1521	1
1522	1
1523	1
1525	1
1527	1
1528	1
1531	1
1532	1
1533	1
1539	1
1547	1
1555	1
1558	1
1560	1
1561	1
1568	1
1574	1
1576	1
1580	1
1581	1
1582	1
1583	1
1585	1
1586	1
1587	1
1590	1
1596	2
1597	1
1599	3
1603	1
1608	1
1609	1
1614	1
1622	1
1628	1
1631	2
1635	1
1637	2
1643	1
1645	1
1652	1
1653	2
1656	1
1663	1
1664	1
1668	1
1670	1
1672	1
1676	1
1682	1
1683	1
1684	2
1688	1
1690	1
1700	1
1701	1
1705	2
1709	1
1710	2
1714	1
1718	1
1724	1
1725	1
1726	1
1734	1
1735	1
1748	1
1753	1
1755	1
1757	1
1759	1
1769	1
1771	1
1777	1
1781	1
1782	1
1786	1
1788	1
1790	1
1793	1
1795	1
1806	1
1807	1
1812	3
1813	1
1814	1
1816	1
1824	1
1826	1
1829	1
1835	1
1839	1
1852	1
1854	1
1861	1
1868	1
1872	1
1874	2
1879	1
1881	1
1884	1
1893	1
1899	1
1902	1
1908	1
1909	1
1910	1
1912	2
1913	2
1915	1
1918	1
1921	1
1929	1
1934	1
1935	1
1937	1
1944	2
1946	1
1951	1
1957	1
1972	1
1973	2
1974	1
1980	1
1992	1
1999	1
2004	1
2022	1
2025	1
2029	1
2051	2
2052	1
2055	1
2068	1
2071	1
2073	1
2077	1
2078	1
2099	1
2101	2
2105	1
2107	2
2120	1
2124	1
2130	1
2141	1
2142	2
2155	1
2163	1
2168	2
2178	2
2193	1
2197	1
2200	1
2205	1
2217	1
2220	1
2231	1
2238	2
2239	1
2256	1
2257	1
2260	1
2266	1
2272	2
2289	1
2290	1
2291	1
2293	1
2296	1
2301	1
2306	1
2312	1
2315	1
2316	1
2322	2
2334	1
2338	1
2354	1
2357	1
2359	1
2371	2
2377	1
2381	1
2387	1
2392	1
2416	1
2438	1
2451	1
2453	1
2466	1
2467	1
2472	1
2482	1
2502	1
2506	1
2507	1
2516	1
2531	1
2566	1
2572	1
2575	1
2586	1
2589	1
2599	1
2607	1
2611	1
2624	1
2629	1
2666	1
2686	1
2695	1
2702	1
2707	1
2724	1
2744	2
2753	1
2770	1
2773	1
2785	1
2841	1
2862	1
2863	1
2911	1
2923	1
2925	1
2929	1
2942	1
2963	1
2993	1
3027	1
3059	1
3064	1
3214	1
3239	1
3262	1
3277	1
3287	1
3332	1
3337	1
3381	1
3441	1
3456	1
3481	1
3486	1
3520	1
3571	1
3585	1
3606	1
3623	1
3634	1
3688	1
3720	1
3798	1
3851	1
3870	1
4027	1
4058	1
4113	1
4115	1
4295	1
4373	1
4394	1
4582	1
4634	1
5051	1
5301	1
5446	1
5959	1
7333	1
8083	1
8155	1
8988	1
9245	1
13166	1
14940	1
17034	1
20147	1
69283	1
1311626	1

[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
__......._._..........._........._...