Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/36fe72607311af6e4b3431d7406bd2/aih-tih-sc-89cc59-R1_B23WHYVLT4_1.Chimeric.out.junction Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/af21c46957f3779ad309958099c219/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/af21c46957f3779ad309958099c219/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/41a9964700bf35e6c5837b500db11d/aih-tih-sc-89cc59-R1_B23WHYVLT4_1_2.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/41a9964700bf35e6c5837b500db11d/aih-tih-sc-89cc59-R1_B23WHYVLT4_1_1.fastp.fastq.gz ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.A6DtlzMNVR/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.A6DtlzMNVR/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary -sample contains 176316506 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.A6DtlzMNVR/ctat_genome_lib_build_dir -J /tmp/nxf.A6DtlzMNVR/aih-tih-sc-89cc59-R1_B23WHYVLT4_1.Chimeric.out.junction -O /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.A6DtlzMNVR/aih-tih-sc-89cc59-R1_B23WHYVLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.A6DtlzMNVR/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=600000.00/min [20000], rate=240000.00/min [30000], rate=138461.54/min [40000], rate=120000.00/min [50000], rate=111111.11/min [60000], rate=105882.35/min [70000], rate=97674.42/min [80000], rate=63157.89/min [90000], rate=51428.57/min [100000], rate=45801.53/min [110000], rate=41250.00/min [120000], rate=38709.68/min [130000], rate=36111.11/min [140000], rate=34426.23/min [150000], rate=33457.25/min [160000], rate=32432.43/min [170000], rate=31677.02/min [180000], rate=30857.14/min [190000], rate=30563.00/min [200000], rate=30150.75/min [210000], rate=30434.78/min [220000], rate=30414.75/min [230000], rate=30396.48/min [240000], rate=30379.75/min [250000], rate=30425.96/min [260000], rate=30528.38/min [270000], rate=30566.04/min [280000], rate=30769.23/min [290000], rate=30742.05/min [300000], rate=30664.40/min [310000], rate=30794.70/min [320000], rate=31067.96/min [330000], rate=31230.28/min [340000], rate=31530.14/min [350000], rate=31914.89/min [360000], rate=32335.33/min [370000], rate=32599.12/min [380000], rate=32900.43/min [390000], rate=33191.49/min [400000], rate=33566.43/min [410000], rate=33931.03/min [420000], rate=34285.71/min [430000], rate=34538.15/min [440000], rate=34828.50/min [450000], rate=35156.25/min [460000], rate=35204.08/min [470000], rate=35516.37/min [480000], rate=35820.90/min [490000], rate=36117.94/min [500000], rate=36407.77/min [510000], rate=35457.71/min [520000], rate=35697.94/min [530000], rate=36013.59/min [540000], rate=36322.87/min [550000], rate=36544.85/min [560000], rate=36801.75/min [570000], rate=37053.09/min [580000], rate=37379.16/min [590000], rate=37659.57/min [600000], rate=37934.67/min [610000], rate=38204.59/min [620000], rate=38549.22/min [630000], rate=38492.87/min [640000], rate=38787.88/min [650000], rate=39039.04/min [660000], rate=39324.73/min [670000], rate=39684.11/min [680000], rate=40000.00/min [690000], rate=40311.59/min [700000], rate=40618.96/min [710000], rate=40922.19/min [720000], rate=41221.37/min [730000], rate=41555.98/min [740000], rate=41926.35/min [750000], rate=42213.88/min [760000], rate=42497.67/min [770000], rate=42817.42/min [780000], rate=42975.21/min [790000], rate=42857.14/min [800000], rate=42704.63/min [810000], rate=42445.41/min [820000], rate=42123.29/min [830000], rate=41743.50/min [840000], rate=41142.86/min [850000], rate=40800.00/min [860000], rate=40344.02/min [870000], rate=39969.37/min [880000], rate=39909.30/min [890000], rate=39555.56/min [900000], rate=39329.93/min [910000], rate=39280.58/min [920000], rate=39316.24/min [930000], rate=39268.12/min [940000], rate=39058.17/min [950000], rate=38854.81/min [960000], rate=38631.79/min [970000], rate=38722.55/min [980000], rate=38863.19/min [990000], rate=38925.29/min [1000000], rate=38961.04/min [1010000], rate=39096.77/min [1020000], rate=39205.64/min [1030000], rate=39338.00/min [1040000], rate=39468.69/min [1050000], rate=39647.58/min [1060000], rate=39675.61/min [1070000], rate=39727.72/min [1080000], rate=39803.44/min [1090000], rate=39829.48/min [1100000], rate=39783.00/min [1110000], rate=39856.37/min [1120000], rate=39834.02/min [1130000], rate=39765.40/min [1140000], rate=39929.95/min [1150000], rate=40092.97/min [1160000], rate=40277.78/min [1170000], rate=40321.65/min [1180000], rate=40410.96/min [1190000], rate=40384.62/min [1200000], rate=40313.55/min [1210000], rate=40266.22/min [1220000], rate=40153.59/min [1230000], rate=39698.76/min [1240000], rate=39344.26/min [1250000], rate=39390.76/min [1260000], rate=39539.75/min [1270000], rate=39687.50/min [1280000], rate=39854.70/min [1290000], rate=40020.68/min [1300000], rate=40061.63/min [1310000], rate=40266.39/min [1320000], rate=40428.79/min [1330000], rate=40590.03/min [1340000], rate=40750.13/min [1350000], rate=40909.09/min [1360000], rate=41087.61/min [1370000], rate=41265.06/min [1380000], rate=41462.19/min [1390000], rate=41658.34/min [1400000], rate=41646.01/min [1410000], rate=41450.27/min [1420000], rate=41359.22/min [1430000], rate=41131.35/min [1440000], rate=41045.13/min [1450000], rate=41115.31/min [1460000], rate=40877.27/min [1470000], rate=41042.35/min [1480000], rate=41263.94/min [1490000], rate=41523.46/min [1500000], rate=41782.73/min [1510000], rate=42061.28/min [1520000], rate=42300.56/min [1530000], rate=42441.05/min [1540000], rate=42600.28/min [1550000], rate=42465.75/min [1560000], rate=42642.37/min [1570000], rate=42876.65/min [1580000], rate=43149.75/min [1590000], rate=43403.09/min [1600000], rate=43656.21/min [1610000], rate=43909.09/min [1620000], rate=44061.65/min [1630000], rate=44233.38/min [1640000], rate=44384.30/min [1650000], rate=44574.52/min [1660000], rate=44723.84/min [1670000], rate=44892.47/min [1680000], rate=45060.35/min [1690000], rate=45227.48/min [1700000], rate=45454.55/min [1710000], rate=45721.93/min [1720000], rate=45968.82/min [1730000], rate=46194.93/min [1740000], rate=46317.66/min [1750000], rate=46439.63/min [1760000], rate=46540.33/min [1770000], rate=46722.39/min [1780000], rate=46862.66/min [1790000], rate=46940.56/min [1800000], rate=46997.39/min [1810000], rate=47012.99/min [1820000], rate=47089.26/min [1830000], rate=47286.82/min [1840000], rate=47524.75/min [1850000], rate=47598.63/min [1860000], rate=47712.70/min [1870000], rate=47744.68/min [1880000], rate=47877.76/min [1890000], rate=48112.01/min [1900000], rate=48346.06/min [1910000], rate=48600.51/min [1920000], rate=48834.25/min [1930000], rate=49047.01/min [1940000], rate=49176.17/min [1950000], rate=49325.46/min [1960000], rate=49453.32/min [1970000], rate=49538.98/min [1980000], rate=49624.06/min [1990000], rate=49440.99/min [2000000], rate=49627.79/min [2010000], rate=49855.31/min [2020000], rate=50061.96/min [2030000], rate=50309.79/min [2040000], rate=50536.75/min [2050000], rate=50763.52/min [2060000], rate=50885.14/min [2070000], rate=50901.64/min [2080000], rate=50731.71/min [2090000], rate=50934.20/min [2100000], rate=51157.13/min [2110000], rate=51379.87/min [2120000], rate=51602.43/min [2130000], rate=51824.82/min [2140000], rate=51962.77/min [2150000], rate=52037.11/min [2160000], rate=52173.91/min [2170000], rate=52310.16/min [2180000], rate=52487.96/min [2190000], rate=52623.15/min [2200000], rate=52778.89/min [2210000], rate=52913.01/min [2220000], rate=53046.59/min [2230000], rate=53221.96/min [2240000], rate=53439.36/min [2250000], rate=53656.60/min [2260000], rate=53873.66/min [2270000], rate=54112.04/min [2280000], rate=54242.66/min [2290000], rate=54351.27/min [2300000], rate=54437.87/min [2310000], rate=54524.00/min [2320000], rate=54674.00/min [2330000], rate=54780.56/min [2340000], rate=54822.34/min [2350000], rate=54863.81/min [2360000], rate=54905.00/min [2370000], rate=54967.14/min [2380000], rate=55135.14/min [2390000], rate=55345.43/min [2400000], rate=55448.59/min [2410000], rate=55636.78/min [2420000], rate=55696.20/min [2430000], rate=55776.59/min [2440000], rate=55856.54/min [2450000], rate=55936.07/min [2460000], rate=55993.93/min [2470000], rate=56178.92/min [2480000], rate=56384.99/min [2490000], rate=56505.30/min [2500000], rate=56625.14/min [2510000], rate=56765.93/min [2520000], rate=56884.88/min [2530000], rate=57024.79/min [2540000], rate=57142.86/min [2550000], rate=57260.48/min [2560000], rate=57463.52/min [2570000], rate=57687.99/min [2580000], rate=57890.80/min [2590000], rate=58028.38/min [2600000], rate=58122.21/min [2610000], rate=58215.61/min [2620000], rate=58286.99/min [2630000], rate=58357.99/min [2640000], rate=58428.62/min [2650000], rate=58498.90/min [2660000], rate=58590.31/min [2670000], rate=58681.32/min [2680000], rate=58793.42/min [2690000], rate=58969.67/min [2700000], rate=59102.52/min -building interval tree based on /tmp/nxf.A6DtlzMNVR/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=100000.00/min [20000], rate=80000.00/min [30000], rate=78260.87/min [40000], rate=64864.86/min [50000], rate=66666.67/min [60000], rate=66666.67/min [70000], rate=66666.67/min [80000], rate=66666.67/min [90000], rate=70129.87/min [100000], rate=71428.57/min [110000], rate=72527.47/min [120000], rate=73469.39/min [130000], rate=75728.16/min [140000], rate=76363.64/min [150000], rate=76923.08/min [160000], rate=76800.00/min [170000], rate=77862.60/min [180000], rate=78260.87/min [190000], rate=78620.69/min [200000], rate=78947.37/min [210000], rate=79746.84/min [220000], rate=80487.80/min [230000], rate=72251.31/min [240000], rate=66055.05/min [250000], rate=62240.66/min [260000], rate=59315.59/min [270000], rate=56842.11/min [280000], rate=54545.45/min [290000], rate=52887.54/min [300000], rate=50847.46/min [310000], rate=48311.69/min [320000], rate=46601.94/min [330000], rate=45517.24/min [340000], rate=44638.95/min [350000], rate=43750.00/min [360000], rate=43548.39/min [370000], rate=43614.93/min [380000], rate=43678.16/min [390000], rate=43738.32/min [400000], rate=43875.69/min [410000], rate=44007.16/min [420000], rate=44210.53/min [430000], rate=44406.20/min [440000], rate=44745.76/min [450000], rate=45075.13/min [460000], rate=45544.55/min [470000], rate=46078.43/min [480000], rate=46601.94/min [490000], rate=47266.88/min [500000], rate=47923.32/min [510000], rate=48417.72/min [520000], rate=49056.60/min [530000], rate=49609.98/min [540000], rate=49846.15/min [550000], rate=49107.14/min [560000], rate=48275.86/min [570000], rate=47237.57/min [580000], rate=46963.56/min [590000], rate=46578.95/min [600000], rate=46391.75/min [610000], rate=46037.74/min [620000], rate=46153.85/min [630000], rate=46210.27/min [640000], rate=46320.87/min [650000], rate=46483.91/min [660000], rate=46698.11/min [670000], rate=46907.82/min [680000], rate=47113.16/min [690000], rate=47368.42/min [700000], rate=47673.10/min [710000], rate=47704.37/min [720000], rate=47110.14/min [730000], rate=46945.34/min [740000], rate=46638.66/min [750000], rate=46487.60/min [760000], rate=46294.42/min [770000], rate=45970.15/min [780000], rate=45972.50/min [790000], rate=45930.23/min [800000], rate=46065.26/min [810000], rate=45548.27/min [820000], rate=45724.91/min [830000], rate=45940.96/min [840000], rate=46238.53/min [850000], rate=46490.43/min [860000], rate=46696.83/min [870000], rate=46942.45/min [880000], rate=47142.86/min [890000], rate=47382.43/min [900000], rate=47661.08/min [910000], rate=47852.76/min [920000], rate=48000.00/min [930000], rate=47855.92/min [940000], rate=47675.40/min [950000], rate=47460.45/min [960000], rate=46601.94/min [970000], rate=46560.00/min [980000], rate=46703.73/min [990000], rate=46661.43/min [1000000], rate=46511.63/min [1010000], rate=46579.55/min [1020000], rate=46153.85/min [1030000], rate=45811.71/min [1040000], rate=45949.93/min [1050000], rate=45851.53/min [1060000], rate=45010.62/min [1070000], rate=44895.10/min [1080000], rate=44906.44/min [1090000], rate=44917.58/min [1100000], rate=44206.30/min [1110000], rate=43529.41/min [1120000], rate=43410.85/min [1130000], rate=43184.71/min [1140000], rate=43291.14/min [1150000], rate=43341.71/min [1160000], rate=43149.41/min [1170000], rate=43279.90/min [1180000], rate=43382.35/min [1190000], rate=43536.59/min [1200000], rate=43689.32/min [1210000], rate=43395.10/min [1220000], rate=43416.37/min [1230000], rate=43617.02/min [1240000], rate=43842.07/min [1250000], rate=44039.93/min [1260000], rate=44262.30/min [1270000], rate=44173.91/min [1280000], rate=43935.93/min [1290000], rate=43852.69/min [1300000], rate=43261.23/min [1310000], rate=43163.10/min [1320000], rate=42810.81/min [1330000], rate=42199.89/min [1340000], rate=41809.67/min [1350000], rate=41538.46/min [1360000], rate=41547.86/min [1370000], rate=41599.19/min [1380000], rate=41608.04/min [1390000], rate=41616.77/min [1400000], rate=41277.64/min [1410000], rate=41187.93/min [1420000], rate=41199.23/min [1430000], rate=41250.00/min [1440000], rate=41339.71/min [1450000], rate=41408.85/min [1460000], rate=41555.98/min [1470000], rate=41603.77/min [1480000], rate=41651.03/min [1490000], rate=41717.22/min [1500000], rate=41782.73/min [1510000], rate=41866.91/min [1520000], rate=41969.63/min [1530000], rate=42090.78/min [1540000], rate=42211.06/min [1550000], rate=42388.33/min [1560000], rate=42564.80/min [1570000], rate=42721.09/min [1580000], rate=42895.93/min [1590000], rate=43069.98/min [1600000], rate=43223.77/min [1610000], rate=43376.74/min [1620000], rate=43489.93/min [1630000], rate=43621.77/min [1640000], rate=43733.33/min [1650000], rate=43844.11/min [1660000], rate=43992.93/min [1670000], rate=44160.42/min [1680000], rate=44288.22/min [1690000], rate=44376.37/min [1700000], rate=44309.30/min [1710000], rate=44281.40/min [1720000], rate=44253.86/min [1730000], rate=44264.39/min [1740000], rate=44032.05/min [1750000], rate=43969.85/min [1760000], rate=44000.00/min [1770000], rate=43956.95/min [1780000], rate=43986.82/min [1790000], rate=43998.36/min [1800000], rate=44063.65/min [1810000], rate=43843.36/min [1820000], rate=43767.54/min [1830000], rate=43832.34/min [1840000], rate=43896.62/min [1850000], rate=43995.24/min [1860000], rate=44093.24/min [1870000], rate=44173.23/min [1880000], rate=44287.40/min [1890000], rate=44400.94/min [1900000], rate=44531.25/min [1910000], rate=44660.95/min [1920000], rate=44790.05/min [1930000], rate=44935.97/min [1940000], rate=45081.33/min [1950000], rate=45243.62/min [1960000], rate=45405.41/min [1970000], rate=45549.13/min [1980000], rate=45727.48/min [1990000], rate=45870.15/min [2000000], rate=46029.92/min [2010000], rate=46206.90/min [2020000], rate=46330.28/min [2030000], rate=46506.30/min [2040000], rate=46664.13/min [2050000], rate=46821.47/min [2060000], rate=46978.34/min [2070000], rate=47116.84/min [2080000], rate=47290.64/min [2090000], rate=47428.14/min [2100000], rate=47601.06/min [2110000], rate=47737.56/min [2120000], rate=47873.54/min [2130000], rate=47990.99/min [2140000], rate=48107.91/min [2150000], rate=48224.30/min [2160000], rate=48322.15/min [2170000], rate=48437.50/min [2180000], rate=48444.44/min [2190000], rate=48415.62/min [2200000], rate=48280.91/min [2210000], rate=47956.60/min [2220000], rate=47948.16/min [2230000], rate=47939.81/min [2240000], rate=47880.30/min [2250000], rate=47736.92/min [2260000], rate=47545.58/min [2270000], rate=47226.07/min [2280000], rate=47026.47/min [2290000], rate=47070.91/min [2300000], rate=47131.15/min [2310000], rate=47191.01/min [2320000], rate=47250.51/min [2330000], rate=47293.64/min [2340000], rate=47384.41/min [2350000], rate=47474.75/min [2360000], rate=47612.64/min [2370000], rate=47798.32/min [2380000], rate=48000.00/min [2390000], rate=48120.81/min [2400000], rate=48241.21/min [2410000], rate=48328.88/min [2420000], rate=48432.29/min [2430000], rate=48535.29/min [2440000], rate=48637.87/min [2450000], rate=48740.05/min [2460000], rate=48825.67/min [2470000], rate=48927.04/min [2480000], rate=48963.47/min [2490000], rate=48967.55/min [2500000], rate=49003.59/min [2510000], rate=49039.40/min [2520000], rate=49138.77/min [2530000], rate=49142.12/min [2540000], rate=49177.15/min [2550000], rate=49227.80/min [2560000], rate=49278.15/min [2570000], rate=49328.21/min [2580000], rate=49393.75/min [2590000], rate=49474.69/min [2600000], rate=49571.02/min [2610000], rate=49651.24/min [2620000], rate=49809.89/min [2630000], rate=49936.71/min [2640000], rate=50031.59/min [2650000], rate=50126.10/min [2660000], rate=50220.26/min [2670000], rate=50298.27/min -building interval tree based on /tmp/nxf.A6DtlzMNVR/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=31578.95/min [20000], rate=31578.95/min [30000], rate=31578.95/min [40000], rate=32000.00/min [50000], rate=32608.70/min [60000], rate=33027.52/min [70000], rate=33600.00/min [80000], rate=34042.55/min [90000], rate=35064.94/min [100000], rate=35294.12/min [110000], rate=36263.74/min [120000], rate=37305.70/min [130000], rate=38235.29/min [140000], rate=39622.64/min [150000], rate=40723.98/min [160000], rate=41739.13/min [170000], rate=43037.97/min [180000], rate=44081.63/min [190000], rate=44881.89/min [200000], rate=45977.01/min [210000], rate=47014.93/min [220000], rate=48351.65/min [230000], rate=49462.37/min [240000], rate=50526.32/min [250000], rate=51369.86/min [260000], rate=51827.24/min [270000], rate=52258.06/min [280000], rate=52664.58/min [290000], rate=53374.23/min [300000], rate=54054.05/min [310000], rate=54705.88/min [320000], rate=55331.41/min [330000], rate=56090.65/min [340000], rate=55585.83/min [350000], rate=54973.82/min [360000], rate=54135.34/min [370000], rate=53623.19/min [380000], rate=53271.03/min [390000], rate=53181.82/min [400000], rate=53215.08/min [410000], rate=53362.26/min [420000], rate=53731.34/min [430000], rate=54088.05/min [440000], rate=54432.99/min [450000], rate=54766.73/min [460000], rate=55200.00/min [470000], rate=56063.62/min [480000], rate=56470.59/min [490000], rate=56976.74/min [500000], rate=57692.31/min [510000], rate=58285.71/min [520000], rate=58757.06/min [530000], rate=59550.56/min [540000], rate=60560.75/min [550000], rate=61682.24/min [560000], rate=62803.74/min [570000], rate=63568.77/min [580000], rate=64206.64/min [590000], rate=64954.13/min [600000], rate=65217.39/min [610000], rate=65591.40/min [620000], rate=66428.57/min [630000], rate=67500.00/min [640000], rate=68206.04/min [650000], rate=68661.97/min [660000], rate=69352.01/min [670000], rate=68953.69/min [680000], rate=68341.71/min [690000], rate=67647.06/min [700000], rate=67092.65/min [710000], rate=66458.66/min [720000], rate=66055.05/min [730000], rate=65470.85/min [740000], rate=65294.12/min [750000], rate=65123.01/min [760000], rate=65142.86/min [770000], rate=65070.42/min [780000], rate=65271.97/min [790000], rate=65289.26/min [800000], rate=65395.10/min [810000], rate=65853.66/min [820000], rate=66218.03/min [830000], rate=66488.65/min [840000], rate=66666.67/min [850000], rate=66841.42/min [860000], rate=65984.65/min [870000], rate=64603.96/min [880000], rate=63461.54/min [890000], rate=61520.74/min [900000], rate=60606.06/min [910000], rate=60132.16/min [920000], rate=60327.87/min [930000], rate=60652.17/min [940000], rate=60710.44/min [950000], rate=60063.22/min [960000], rate=59442.72/min [970000], rate=58258.26/min [980000], rate=58102.77/min [990000], rate=57391.30/min [1000000], rate=57197.33/min [1010000], rate=57008.47/min [1020000], rate=56301.75/min [1030000], rate=54835.85/min [1040000], rate=54497.82/min [1050000], rate=53984.58/min [1060000], rate=53898.31/min [1070000], rate=53544.62/min [1080000], rate=52811.74/min [1090000], rate=52784.50/min [1100000], rate=52842.27/min [1110000], rate=52857.14/min [1120000], rate=52996.85/min [1130000], rate=53093.19/min [1140000], rate=52777.78/min [1150000], rate=52752.29/min [1160000], rate=52727.27/min [1170000], rate=52821.67/min [1180000], rate=52835.82/min [1190000], rate=52538.63/min [1200000], rate=52023.12/min [1210000], rate=51198.87/min [1220000], rate=50868.66/min [1230000], rate=50306.75/min [1240000], rate=50338.29/min [1250000], rate=50403.23/min [1260000], rate=50400.00/min [1270000], rate=49674.05/min [1280000], rate=49167.73/min [1290000], rate=49267.98/min [1300000], rate=49461.00/min [1310000], rate=49621.21/min [1320000], rate=49811.32/min [1330000], rate=49781.66/min [1340000], rate=49446.49/min [1350000], rate=49390.24/min [1360000], rate=49484.54/min [1370000], rate=48899.46/min [1380000], rate=48223.65/min [1390000], rate=47225.37/min [1400000], rate=46848.86/min [1410000], rate=46407.02/min [1420000], rate=45391.58/min [1430000], rate=45205.48/min [1440000], rate=45046.92/min [1450000], rate=44868.49/min [1460000], rate=44287.16/min [1470000], rate=43750.00/min [1480000], rate=43023.26/min [1490000], rate=42490.49/min [1500000], rate=42174.32/min [1510000], rate=41886.27/min [1520000], rate=41873.28/min [1530000], rate=41746.25/min [1540000], rate=41734.42/min [1550000], rate=41760.22/min [1560000], rate=41655.54/min [1570000], rate=41626.16/min [1580000], rate=41633.73/min [1590000], rate=41659.39/min [1600000], rate=41630.53/min [1610000], rate=41405.92/min [1620000], rate=41047.30/min [1630000], rate=40750.00/min [1640000], rate=40779.11/min [1650000], rate=40640.39/min [1660000], rate=40340.22/min [1670000], rate=40403.23/min [1680000], rate=40481.93/min [1690000], rate=40158.42/min [1700000], rate=39953.00/min [1710000], rate=40046.84/min [1720000], rate=40155.64/min [1730000], rate=40263.77/min [1740000], rate=40200.23/min [1750000], rate=39954.34/min [1760000], rate=39639.64/min [1770000], rate=39391.69/min [1780000], rate=39453.27/min [1790000], rate=39528.89/min [1800000], rate=39662.14/min [1810000], rate=39780.22/min [1820000], rate=39883.13/min [1830000], rate=40014.58/min [1840000], rate=40160.06/min [1850000], rate=40246.56/min [1860000], rate=40317.92/min [1870000], rate=40432.43/min [1880000], rate=40517.24/min [1890000], rate=40572.45/min [1900000], rate=40627.23/min [1910000], rate=40724.95/min [1920000], rate=40822.11/min [1930000], rate=40918.73/min [1940000], rate=40713.54/min [1950000], rate=40233.84/min [1960000], rate=40095.47/min [1970000], rate=40094.98/min [1980000], rate=40108.04/min [1990000], rate=40188.49/min [2000000], rate=40281.97/min [2010000], rate=40361.45/min [2020000], rate=40400.00/min [2030000], rate=40451.68/min [2040000], rate=40489.58/min [2050000], rate=40527.18/min [2060000], rate=40617.81/min [2070000], rate=40748.03/min [2080000], rate=40810.99/min [2090000], rate=40860.22/min [2100000], rate=40869.28/min [2110000], rate=40904.68/min [2120000], rate=40979.38/min [2130000], rate=41040.46/min [2140000], rate=41088.00/min [2150000], rate=41148.33/min [2160000], rate=41195.17/min [2170000], rate=41241.69/min [2180000], rate=41287.88/min [2190000], rate=41398.87/min [2200000], rate=41444.27/min [2210000], rate=41476.38/min [2220000], rate=41508.26/min [2230000], rate=41591.54/min [2240000], rate=41661.50/min [2250000], rate=41705.28/min [2260000], rate=41748.77/min [2270000], rate=41715.16/min [2280000], rate=41669.20/min [2290000], rate=41585.96/min [2300000], rate=41603.86/min [2310000], rate=41621.62/min [2320000], rate=41676.65/min [2330000], rate=41706.44/min [2340000], rate=41698.84/min [2350000], rate=41691.31/min [2360000], rate=41708.39/min [2370000], rate=41737.60/min [2380000], rate=41754.39/min [2390000], rate=41758.88/min [2400000], rate=41811.85/min [2410000], rate=41840.28/min [2420000], rate=41868.51/min [2430000], rate=41896.55/min [2440000], rate=41912.40/min [2450000], rate=41964.03/min [2460000], rate=42015.37/min [2470000], rate=42078.36/min [2480000], rate=42152.97/min [2490000], rate=42227.25/min [2500000], rate=42301.18/min [2510000], rate=42386.72/min [2520000], rate=42459.98/min [2530000], rate=42544.84/min [2540000], rate=42629.37/min [2550000], rate=42713.57/min [2560000], rate=42797.44/min [2570000], rate=42892.91/min [2580000], rate=42976.12/min [2590000], rate=43070.95/min [2600000], rate=43165.47/min [2610000], rate=43259.67/min [2620000], rate=43317.72/min [2630000], rate=43387.41/min -building interval tree based on /tmp/nxf.A6DtlzMNVR/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=100000.00/min [20000], rate=100000.00/min [30000], rate=120000.00/min [40000], rate=126315.79/min [50000], rate=111111.11/min [60000], rate=100000.00/min [70000], rate=95454.55/min [80000], rate=92307.69/min [90000], rate=100000.00/min [100000], rate=111111.11/min [110000], rate=110000.00/min [120000], rate=116129.03/min [130000], rate=113043.48/min [140000], rate=112000.00/min [150000], rate=111111.11/min [160000], rate=109090.91/min [170000], rate=107368.42/min [180000], rate=110204.08/min [190000], rate=115151.52/min [200000], rate=117647.06/min [210000], rate=120000.00/min [220000], rate=122222.22/min [230000], rate=123214.29/min [240000], rate=125217.39/min [250000], rate=126050.42/min [260000], rate=127868.85/min [270000], rate=131707.32/min [280000], rate=135483.87/min [290000], rate=140322.58/min [300000], rate=145161.29/min [310000], rate=145312.50/min [320000], rate=144360.90/min [330000], rate=143478.26/min [340000], rate=141666.67/min [350000], rate=141891.89/min [360000], rate=142105.26/min [370000], rate=137888.20/min [380000], rate=134117.65/min [390000], rate=132203.39/min [400000], rate=129729.73/min [410000], rate=132258.06/min [420000], rate=134759.36/min [430000], rate=133678.76/min [440000], rate=135384.62/min [450000], rate=133663.37/min [460000], rate=132692.31/min [470000], rate=131775.70/min [480000], rate=130909.09/min [490000], rate=129515.42/min [500000], rate=131004.37/min [510000], rate=133624.45/min [520000], rate=133333.33/min [530000], rate=134177.22/min [540000], rate=135000.00/min [550000], rate=135802.47/min [560000], rate=136032.39/min [570000], rate=136254.98/min [580000], rate=137007.87/min [590000], rate=139370.08/min [600000], rate=141176.47/min [610000], rate=143529.41/min [620000], rate=145882.35/min [630000], rate=144827.59/min [640000], rate=144360.90/min [650000], rate=142857.14/min [660000], rate=143478.26/min [670000], rate=143571.43/min [680000], rate=141666.67/min [690000], rate=139864.86/min [700000], rate=138157.89/min [710000], rate=136977.49/min [720000], rate=137142.86/min [730000], rate=139047.62/min [740000], rate=139184.95/min [750000], rate=140186.92/min [760000], rate=139449.54/min [770000], rate=138738.74/min [780000], rate=139285.71/min [790000], rate=139823.01/min [800000], rate=138728.32/min [810000], rate=138857.14/min [820000], rate=140571.43/min [830000], rate=140677.97/min [840000], rate=141176.47/min [850000], rate=141666.67/min [860000], rate=142148.76/min [870000], rate=142234.33/min [880000], rate=141935.48/min [890000], rate=143163.54/min [900000], rate=144772.12/min [910000], rate=146380.70/min [920000], rate=146808.51/min [930000], rate=146842.11/min [940000], rate=146493.51/min [950000], rate=145780.05/min [960000], rate=145454.55/min [970000], rate=145864.66/min [980000], rate=145185.19/min [990000], rate=143825.67/min [1000000], rate=142517.81/min [1010000], rate=141588.79/min [1020000], rate=140366.97/min [1030000], rate=141418.76/min [1040000], rate=142791.76/min [1050000], rate=142212.19/min [1060000], rate=142921.35/min [1070000], rate=142035.40/min [1080000], rate=142105.26/min [1090000], rate=142794.76/min [1100000], rate=142241.38/min [1110000], rate=141401.27/min [1120000], rate=142675.16/min [1130000], rate=143340.38/min [1140000], rate=143396.23/min [1150000], rate=143750.00/min [1160000], rate=144099.38/min [1170000], rate=144444.44/min [1180000], rate=144489.80/min [1190000], rate=144827.59/min [1200000], rate=145748.99/min [1210000], rate=146963.56/min [1220000], rate=147878.79/min [1230000], rate=141923.08/min [1240000], rate=128055.08/min [1250000], rate=116099.07/min [1260000], rate=107539.12/min [1270000], rate=101329.79/min [1280000], rate=95522.39/min [1290000], rate=88054.61/min [1300000], rate=81675.39/min [1310000], rate=77821.78/min [1320000], rate=75717.02/min [1330000], rate=72810.22/min [1340000], rate=70526.32/min [1350000], rate=67556.30/min [1360000], rate=65542.17/min [1370000], rate=63968.87/min [1380000], rate=62774.83/min [1390000], rate=61054.17/min [1400000], rate=56949.15/min [1410000], rate=54475.21/min [1420000], rate=52886.41/min [1430000], rate=52285.19/min [1440000], rate=51736.53/min [1450000], rate=50230.95/min [1460000], rate=49829.35/min [1470000], rate=49439.46/min [1480000], rate=48710.92/min [1490000], rate=47553.19/min [1500000], rate=46753.25/min [1510000], rate=46271.71/min [1520000], rate=45440.96/min [1530000], rate=45243.96/min [1540000], rate=45227.61/min [1550000], rate=45211.47/min [1560000], rate=45239.25/min [1570000], rate=45201.54/min [1580000], rate=45164.36/min [1590000], rate=45127.72/min [1600000], rate=45091.59/min [1610000], rate=45119.10/min [1620000], rate=45062.59/min [1630000], rate=44882.97/min [1640000], rate=44324.32/min [1650000], rate=43844.11/min [1660000], rate=43493.45/min [1670000], rate=43208.28/min [1680000], rate=42911.88/min [1690000], rate=42676.77/min [1700000], rate=42500.00/min [1710000], rate=42361.68/min [1720000], rate=42469.14/min [1730000], rate=42558.43/min [1740000], rate=42664.49/min [1750000], rate=42752.44/min [1760000], rate=42891.96/min [1770000], rate=43030.79/min [1780000], rate=42960.58/min [1790000], rate=42788.84/min [1800000], rate=42738.43/min [1810000], rate=42355.69/min [1820000], rate=42032.33/min [1830000], rate=41860.47/min [1840000], rate=41613.27/min [1850000], rate=41387.02/min [1860000], rate=41256.93/min [1870000], rate=41265.17/min [1880000], rate=41333.82/min [1890000], rate=41432.23/min [1900000], rate=41499.82/min [1910000], rate=41597.10/min [1920000], rate=41708.91/min [1930000], rate=41820.15/min [1940000], rate=41930.84/min [1950000], rate=42056.07/min [1960000], rate=42195.91/min [1970000], rate=42335.24/min [1980000], rate=42443.73/min [1990000], rate=42235.59/min [2000000], rate=41987.40/min [2010000], rate=41701.24/min [2020000], rate=41450.07/min [2030000], rate=41162.55/min [2040000], rate=40991.29/min [2050000], rate=40755.47/min [2060000], rate=40537.88/min [2070000], rate=40403.38/min [2080000], rate=39897.70/min [2090000], rate=39633.38/min [2100000], rate=39585.30/min [2110000], rate=39488.46/min [2120000], rate=39271.38/min [2130000], rate=39154.41/min [2140000], rate=39158.28/min [2150000], rate=39174.01/min [2160000], rate=39118.62/min [2170000], rate=39122.60/min [2180000], rate=39126.53/min [2190000], rate=39130.43/min [2200000], rate=39076.38/min [2210000], rate=39068.95/min [2220000], rate=39073.04/min [2230000], rate=39065.69/min [2240000], rate=39024.39/min [2250000], rate=39039.91/min [2260000], rate=39044.05/min [2270000], rate=39003.44/min [2280000], rate=38996.58/min [2290000], rate=39011.93/min [2300000], rate=38950.04/min [2310000], rate=38747.55/min [2320000], rate=38634.47/min [2330000], rate=38554.88/min [2340000], rate=38476.29/min [2350000], rate=38419.62/min [2360000], rate=38405.21/min [2370000], rate=38401.30/min [2380000], rate=38376.78/min [2390000], rate=38362.76/min [2400000], rate=38369.30/min [2410000], rate=38355.44/min [2420000], rate=38382.24/min [2430000], rate=38388.63/min [2440000], rate=38415.11/min [2450000], rate=38421.33/min [2460000], rate=38427.49/min [2470000], rate=38443.58/min [2480000], rate=38469.49/min [2490000], rate=38495.23/min [2500000], rate=38520.80/min [2510000], rate=38556.07/min [2520000], rate=38600.97/min [2530000], rate=38655.46/min [2540000], rate=38709.68/min [2550000], rate=38773.44/min [2560000], rate=38827.10/min [2570000], rate=38900.10/min [2580000], rate=38982.62/min [2590000], rate=39064.86/min [2600000], rate=39146.80/min [2610000], rate=39228.46/min [2620000], rate=39319.66/min [2630000], rate=39263.50/min [2640000], rate=39159.46/min [2650000], rate=39085.55/min [2660000], rate=38993.40/min [2670000], rate=38978.10/min [2680000], rate=38934.62/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.A6DtlzMNVR/ctat_genome_lib_build_dir --filt_file /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 18000000.00 reads per min processed... 24000000.00 reads per min processed... 15000000.00 reads per min processed... 18000000.00 reads per min processed... 14000000.00 reads per min processed... 16000000.00 reads per min processed... 13500000.00 reads per min processed... 15000000.00 reads per min processed... 16500000.00 reads per min processed... 12000000.00 reads per min processed... 11142857.14 reads per min processed... 10500000.00 reads per min processed... 10000000.00 reads per min processed... 9600000.00 reads per min processed... 9272727.27 reads per min processed... 9000000.00 reads per min processed... 8142857.14 reads per min processed... 8000000.00 reads per min processed... 7875000.00 reads per min processed... 7764705.88 reads per min processed... 7666666.67 reads per min processed... 7578947.37 reads per min processed... 7500000.00 reads per min processed... 7428571.43 reads per min processed... 7043478.26 reads per min processed... 6720000.00 reads per min processed... 6692307.69 reads per min processed... 6666666.67 reads per min processed... 6642857.14 reads per min processed... 6400000.00 reads per min processed... 6387096.77 reads per min processed... 6375000.00 reads per min processed... 6363636.36 reads per min processed... 6171428.57 reads per min processed... 6166666.67 reads per min processed... 6162162.16 reads per min processed... 6157894.74 reads per min processed... 6153846.15 reads per min processed... 6150000.00 reads per min processed... 6146341.46 reads per min processed... 6142857.14 reads per min processed... 6139534.88 reads per min processed... 6136363.64 reads per min processed... 6133333.33 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6109090.91 reads per min processed... 6107142.86 reads per min processed... 6214285.71 reads per min processed... 6210526.32 reads per min processed... 6315789.47 reads per min processed... 6310344.83 reads per min processed... 6413793.10 reads per min processed... 6517241.38 reads per min processed... 6508474.58 reads per min processed... 6610169.49 reads per min processed... 6600000.00 reads per min processed... 6590163.93 reads per min processed... 6580645.16 reads per min processed... 6571428.57 reads per min processed... 6562500.00 reads per min processed... 6454545.45 reads per min processed... 6447761.19 reads per min processed... 6441176.47 reads per min processed... 6434782.61 reads per min processed... 6428571.43 reads per min processed... 6422535.21 reads per min processed... 6416666.67 reads per min processed... 6410958.90 reads per min processed... 6405405.41 reads per min processed... 6315789.47 reads per min processed... 6311688.31 reads per min processed... 6307692.31 reads per min processed... 6303797.47 reads per min processed... 6300000.00 reads per min processed... 6296296.30 reads per min processed... 6292682.93 reads per min processed... 6289156.63 reads per min processed... 6285714.29 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.A6DtlzMNVR/aih-tih-sc-89cc59-R1_B23WHYVLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.A6DtlzMNVR/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -256312.318877 EM: Round [1] log likelihood: -256046.345474 EM: Round [2] log likelihood: -255957.261371 EM: Round [3] log likelihood: -255916.253827 EM: Round [4] log likelihood: -255894.805045 EM: Round [5] log likelihood: -255882.691279 EM: Round [6] log likelihood: -255875.434515 EM: Round [7] log likelihood: -255870.855149 EM: Round [8] log likelihood: -255867.823921 EM: Round [9] log likelihood: -255865.728950 EM: Round [10] log likelihood: -255864.225115 EM: Round [11] log likelihood: -255863.109938 EM: Round [12] log likelihood: -255862.259960 EM: Round [13] log likelihood: -255861.597068 EM: Round [14] log likelihood: -255861.070087 EM: Round [15] log likelihood: -255860.644388 EM: Round [16] log likelihood: -255860.295843 EM: Round [17] log likelihood: -255860.007190 EM: Round [18] log likelihood: -255859.765788 EM: Round [19] log likelihood: -255859.562188 EM: Round [20] log likelihood: -255859.389195 EM: Round [21] log likelihood: -255859.241245 EM: Round [22] log likelihood: -255859.113974 EM: Round [23] log likelihood: -255859.003915 EM: Round [24] log likelihood: -255858.908286 EM: Round [25] log likelihood: -255858.824831 EM: Round [26] log likelihood: -255858.751705 EM: Round [27] log likelihood: -255858.687387 EM: Round [28] log likelihood: -255858.630617 EM: Round [29] log likelihood: -255858.580340 EM: Round [30] log likelihood: -255858.535673 EM: Round [31] log likelihood: -255858.495870 EM: Round [32] log likelihood: -255858.460298 EM: Round [33] log likelihood: -255858.428420 EM: Round [34] log likelihood: -255858.399775 EM: Round [35] log likelihood: -255858.373969 EM: Round [36] log likelihood: -255858.350662 EM: Round [37] log likelihood: -255858.329562 EM: Round [38] log likelihood: -255858.310415 EM: Round [39] log likelihood: -255858.293002 EM: Round [40] log likelihood: -255858.277130 EM: Round [41] log likelihood: -255858.262633 EM: Round [42] log likelihood: -255858.249364 EM: Round [43] log likelihood: -255858.237196 EM: Round [44] log likelihood: -255858.226016 EM: Round [45] log likelihood: -255858.215725 EM: Round [46] log likelihood: -255858.206235 EM: Round [47] log likelihood: -255858.197469 EM: Round [48] log likelihood: -255858.189358 EM: Round [49] log likelihood: -255858.181842 EM: Round [50] log likelihood: -255858.174866 EM: Round [51] log likelihood: -255858.168382 EM: Round [52] log likelihood: -255858.162348 EM: Round [53] log likelihood: -255858.156723 EM: Round [54] log likelihood: -255858.151474 EM: Round [55] log likelihood: -255858.146569 EM: Round [56] log likelihood: -255858.141981 EM: Round [57] log likelihood: -255858.137684 EM: Round [58] log likelihood: -255858.133655 EM: Round [59] log likelihood: -255858.129874 EM: Round [60] log likelihood: -255858.126322 EM: Round [61] log likelihood: -255858.122981 EM: Round [62] log likelihood: -255858.119837 EM: Round [63] log likelihood: -255858.116875 EM: Round [64] log likelihood: -255858.114083 EM: Round [65] log likelihood: -255858.111448 EM: Round [66] log likelihood: -255858.108960 EM: Round [67] log likelihood: -255858.106609 EM: Round [68] log likelihood: -255858.104386 EM: Round [69] log likelihood: -255858.102282 EM: Round [70] log likelihood: -255858.100290 EM: Round [71] log likelihood: -255858.098402 EM: Round [72] log likelihood: -255858.096613 EM: Round [73] log likelihood: -255858.094916 EM: Round [74] log likelihood: -255858.093305 EM: Round [75] log likelihood: -255858.091775 EM: Round [76] log likelihood: -255858.090322 EM: Round [77] log likelihood: -255858.088941 EM: Round [78] log likelihood: -255858.087627 EM: Round [79] log likelihood: -255858.086377 EM: Round [80] log likelihood: -255858.085188 EM: Round [81] log likelihood: -255858.084055 EM: Round [82] log likelihood: -255858.082976 EM: Round [83] log likelihood: -255858.081948 EM: Round [84] log likelihood: -255858.080968 EM: Round [85] log likelihood: -255858.080033 EM: Round [86] log likelihood: -255858.079141 EM: Round [87] log likelihood: -255858.078290 EM: Round [88] log likelihood: -255858.077477 EM: Round [89] log likelihood: -255858.076701 EM: Round [90] log likelihood: -255858.075959 EM: Round [91] log likelihood: -255858.075250 EM: Round [92] log likelihood: -255858.074573 EM: Round [93] log likelihood: -255858.073925 EM: Round [94] log likelihood: -255858.073306 EM: Round [95] log likelihood: -255858.072713 EM: Round [96] log likelihood: -255858.072145 EM: Round [97] log likelihood: -255858.071602 EM: Round [98] log likelihood: -255858.071082 EM: Round [99] log likelihood: -255858.070584 EM: Round [100] log likelihood: -255858.070106 EM: Round [101] log likelihood: -255858.069649 EM: Round [102] log likelihood: -255858.069210 EM: Round [103] log likelihood: -255858.068790 EM: Round [104] log likelihood: -255858.068387 EM: Round [105] log likelihood: -255858.068000 EM: Round [106] log likelihood: -255858.067629 EM: Round [107] log likelihood: -255858.067272 EM: Round [108] log likelihood: -255858.066930 EM: Round [109] log likelihood: -255858.066602 EM: Round [110] log likelihood: -255858.066287 EM: Round [111] log likelihood: -255858.065984 EM: Round [112] log likelihood: -255858.065693 EM: Round [113] log likelihood: -255858.065413 EM: Round [114] log likelihood: -255858.065144 EM: Round [115] log likelihood: -255858.064886 EM: Round [116] log likelihood: -255858.064637 EM: Round [117] log likelihood: -255858.064398 EM: Round [118] log likelihood: -255858.064168 EM: Round [119] log likelihood: -255858.063947 EM: Round [120] log likelihood: -255858.063734 EM: Round [121] log likelihood: -255858.063528 EM: Round [122] log likelihood: -255858.063331 EM: Round [123] log likelihood: -255858.063141 EM: Round [124] log likelihood: -255858.062958 EM: Round [125] log likelihood: -255858.062781 EM: Round [126] log likelihood: -255858.062611 EM: Round [127] log likelihood: -255858.062447 EM: Round [128] log likelihood: -255858.062289 EM: Round [129] log likelihood: -255858.062137 EM: Round [130] log likelihood: -255858.061990 EM: Round [131] log likelihood: -255858.061848 EM: Round [132] log likelihood: -255858.061712 EM: Round [133] log likelihood: -255858.061580 EM: Round [134] log likelihood: -255858.061452 EM: Round [135] log likelihood: -255858.061329 EM: Round [136] log likelihood: -255858.061211 EM: Round [137] log likelihood: -255858.061096 EM: Round [138] log likelihood: -255858.060986 EM: Round [139] log likelihood: -255858.060879 EM: Round [140] log likelihood: -255858.060775 EM: Round [141] log likelihood: -255858.060676 EM: Stopping iterations at round 141 due to insufficient improvement in likelihood. EM: Starting log likelihood: -255512.291449 EM: Round [1] log likelihood: -255304.433705 EM: Round [2] log likelihood: -255235.231417 EM: Round [3] log likelihood: -255203.822120 EM: Round [4] log likelihood: -255187.567607 EM: Round [5] log likelihood: -255178.449021 EM: Round [6] log likelihood: -255173.001400 EM: Round [7] log likelihood: -255169.560211 EM: Round [8] log likelihood: -255167.273665 EM: Round [9] log likelihood: -255165.684478 EM: Round [10] log likelihood: -255164.536132 EM: Round [11] log likelihood: -255163.678503 EM: Round [12] log likelihood: -255163.020091 EM: Round [13] log likelihood: -255162.502935 EM: Round [14] log likelihood: -255162.088982 EM: Round [15] log likelihood: -255161.752405 EM: Round [16] log likelihood: -255161.475140 EM: Round [17] log likelihood: -255161.244213 EM: Round [18] log likelihood: -255161.050076 EM: Round [19] log likelihood: -255160.885557 EM: Round [20] log likelihood: -255160.745166 EM: Round [21] log likelihood: -255160.624634 EM: Round [22] log likelihood: -255160.520593 EM: Round [23] log likelihood: -255160.430351 EM: Round [24] log likelihood: -255160.351737 EM: Round [25] log likelihood: -255160.282977 EM: Round [26] log likelihood: -255160.222616 EM: Round [27] log likelihood: -255160.169445 EM: Round [28] log likelihood: -255160.122457 EM: Round [29] log likelihood: -255160.080808 EM: Round [30] log likelihood: -255160.043785 EM: Round [31] log likelihood: -255160.010782 EM: Round [32] log likelihood: -255159.981287 EM: Round [33] log likelihood: -255159.954858 EM: Round [34] log likelihood: -255159.931120 EM: Round [35] log likelihood: -255159.909749 EM: Round [36] log likelihood: -255159.890463 EM: Round [37] log likelihood: -255159.873021 EM: Round [38] log likelihood: -255159.857212 EM: Round [39] log likelihood: -255159.842854 EM: Round [40] log likelihood: -255159.829787 EM: Round [41] log likelihood: -255159.817871 EM: Round [42] log likelihood: -255159.806984 EM: Round [43] log likelihood: -255159.797020 EM: Round [44] log likelihood: -255159.787882 EM: Round [45] log likelihood: -255159.779489 EM: Round [46] log likelihood: -255159.771766 EM: Round [47] log likelihood: -255159.764649 EM: Round [48] log likelihood: -255159.758079 EM: Round [49] log likelihood: -255159.752005 EM: Round [50] log likelihood: -255159.746382 EM: Round [51] log likelihood: -255159.741168 EM: Round [52] log likelihood: -255159.736328 EM: Round [53] log likelihood: -255159.731828 EM: Round [54] log likelihood: -255159.727640 EM: Round [55] log likelihood: -255159.723737 EM: Round [56] log likelihood: -255159.720095 EM: Round [57] log likelihood: -255159.716693 EM: Round [58] log likelihood: -255159.713512 EM: Round [59] log likelihood: -255159.710534 EM: Round [60] log likelihood: -255159.707744 EM: Round [61] log likelihood: -255159.705127 EM: Round [62] log likelihood: -255159.702670 EM: Round [63] log likelihood: -255159.700362 EM: Round [64] log likelihood: -255159.698191 EM: Round [65] log likelihood: -255159.696147 EM: Round [66] log likelihood: -255159.694222 EM: Round [67] log likelihood: -255159.692408 EM: Round [68] log likelihood: -255159.690696 EM: Round [69] log likelihood: -255159.689080 EM: Round [70] log likelihood: -255159.687553 EM: Round [71] log likelihood: -255159.686110 EM: Round [72] log likelihood: -255159.684744 EM: Round [73] log likelihood: -255159.683452 EM: Round [74] log likelihood: -255159.682228 EM: Round [75] log likelihood: -255159.681068 EM: Round [76] log likelihood: -255159.679968 EM: Round [77] log likelihood: -255159.678925 EM: Round [78] log likelihood: -255159.677934 EM: Round [79] log likelihood: -255159.676994 EM: Round [80] log likelihood: -255159.676100 EM: Round [81] log likelihood: -255159.675250 EM: Round [82] log likelihood: -255159.674442 EM: Round [83] log likelihood: -255159.673673 EM: Round [84] log likelihood: -255159.672941 EM: Round [85] log likelihood: -255159.672244 EM: Round [86] log likelihood: -255159.671580 EM: Round [87] log likelihood: -255159.670947 EM: Round [88] log likelihood: -255159.670343 EM: Round [89] log likelihood: -255159.669767 EM: Round [90] log likelihood: -255159.669217 EM: Round [91] log likelihood: -255159.668693 EM: Round [92] log likelihood: -255159.668192 EM: Round [93] log likelihood: -255159.667713 EM: Round [94] log likelihood: -255159.667255 EM: Round [95] log likelihood: -255159.666818 EM: Round [96] log likelihood: -255159.666399 EM: Round [97] log likelihood: -255159.665999 EM: Round [98] log likelihood: -255159.665616 EM: Round [99] log likelihood: -255159.665249 EM: Round [100] log likelihood: -255159.664898 EM: Round [101] log likelihood: -255159.664562 EM: Round [102] log likelihood: -255159.664239 EM: Round [103] log likelihood: -255159.663930 EM: Round [104] log likelihood: -255159.663634 EM: Round [105] log likelihood: -255159.663349 EM: Round [106] log likelihood: -255159.663077 EM: Round [107] log likelihood: -255159.662815 EM: Round [108] log likelihood: -255159.662563 EM: Round [109] log likelihood: -255159.662322 EM: Round [110] log likelihood: -255159.662090 EM: Round [111] log likelihood: -255159.661868 EM: Round [112] log likelihood: -255159.661654 EM: Round [113] log likelihood: -255159.661448 EM: Round [114] log likelihood: -255159.661250 EM: Round [115] log likelihood: -255159.661060 EM: Round [116] log likelihood: -255159.660876 EM: Round [117] log likelihood: -255159.660700 EM: Round [118] log likelihood: -255159.660531 EM: Round [119] log likelihood: -255159.660367 EM: Round [120] log likelihood: -255159.660210 EM: Round [121] log likelihood: -255159.660058 EM: Round [122] log likelihood: -255159.659912 EM: Round [123] log likelihood: -255159.659772 EM: Round [124] log likelihood: -255159.659636 EM: Round [125] log likelihood: -255159.659505 EM: Round [126] log likelihood: -255159.659379 EM: Round [127] log likelihood: -255159.659257 EM: Round [128] log likelihood: -255159.659140 EM: Round [129] log likelihood: -255159.659026 EM: Round [130] log likelihood: -255159.658917 EM: Round [131] log likelihood: -255159.658811 EM: Round [132] log likelihood: -255159.658709 EM: Round [133] log likelihood: -255159.658610 EM: Stopping iterations at round 133 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.A6DtlzMNVR/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.A6DtlzMNVR/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.A6DtlzMNVR/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 176316506 > /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.A6DtlzMNVR/ctat_genome_lib_build_dir > /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.A6DtlzMNVR/ctat_genome_lib_build_dir --annotate /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.A6DtlzMNVR/ctat_genome_lib_build_dir -done, see /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.A6DtlzMNVR/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 1086, filtered: 8907) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.A6DtlzMNVR/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.A6DtlzMNVR/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000267790.1] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000278399.1] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000243753.5] WARNING, no entry stored in dbm for [ENSG00000181126.13] WARNING, no entry stored in dbm for [ENSG00000204622.11] WARNING, no entry stored in dbm for [ENSG00000235290.1] WARNING, no entry stored in dbm for [ENSG00000284639.1] WARNING, no entry stored in dbm for [ENSG00000248618.1] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000225851.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000232226.2] WARNING, no entry stored in dbm for [ENSG00000254632.2] WARNING, no entry stored in dbm for [ENSG00000255177.2] WARNING, no entry stored in dbm for [ENSG00000230479.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000234793.1] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [ENSG00000173209.23] WARNING, no entry stored in dbm for [ENSG00000243980.3] WARNING, no entry stored in dbm for [ENSG00000263740.2] WARNING, no entry stored in dbm for [ENSG00000275716.1] WARNING, no entry stored in dbm for [ENSG00000204623.9] WARNING, no entry stored in dbm for [ENSG00000228623.6] WARNING, no entry stored in dbm for [ENSG00000273313.1] WARNING, no entry stored in dbm for [ENSG00000271699.5] WARNING, no entry stored in dbm for [ENSG00000224555.3] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000250764.1] WARNING, no entry stored in dbm for [ENSG00000269032.1] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000270495.1] WARNING, no entry stored in dbm for [ENSG00000286939.1] WARNING, no entry stored in dbm for [ENSG00000225594.1] WARNING, no entry stored in dbm for [ENSG00000284707.2] WARNING, no entry stored in dbm for [ENSG00000257495.5] WARNING, no entry stored in dbm for [ENSG00000177640.16] WARNING, no entry stored in dbm for [ENSG00000267871.6] WARNING, no entry stored in dbm for [ENSG00000216754.2] WARNING, no entry stored in dbm for [ENSG00000236562.4] WARNING, no entry stored in dbm for [ENSG00000283103.3] WARNING, no entry stored in dbm for [ENSG00000267273.1] WARNING, no entry stored in dbm for [ENSG00000237234.7] WARNING, no entry stored in dbm for [ENSG00000246273.8] WARNING, no entry stored in dbm for [ENSG00000262445.3] WARNING, no entry stored in dbm for [ENSG00000213468.7] WARNING, no entry stored in dbm for [ENSG00000230807.1] WARNING, no entry stored in dbm for [ENSG00000261586.2] WARNING, no entry stored in dbm for [ENSG00000271797.1] WARNING, no entry stored in dbm for [ENSG00000277159.1] WARNING, no entry stored in dbm for [ENSG00000261625.1] WARNING, no entry stored in dbm for [ENSG00000262313.1] WARNING, no entry stored in dbm for [ENSG00000232600.3] WARNING, no entry stored in dbm for [ENSG00000227755.1] WARNING, no entry stored in dbm for [ENSG00000244376.3] WARNING, no entry stored in dbm for [ENSG00000234911.2] WARNING, no entry stored in dbm for [ENSG00000226210.3] WARNING, no entry stored in dbm for [ENSG00000273125.2] WARNING, no entry stored in dbm for [ENSG00000241316.8] WARNING, no entry stored in dbm for [ENSG00000068781.21] WARNING, no entry stored in dbm for [ENSG00000278531.1] WARNING, no entry stored in dbm for [ENSG00000206633.1] WARNING, no entry stored in dbm for [ENSG00000175061.18] WARNING, no entry stored in dbm for [ENSG00000268364.2] WARNING, no entry stored in dbm for [ENSG00000218537.1] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000268287.1] WARNING, no entry stored in dbm for [ENSG00000262801.6] WARNING, no entry stored in dbm for [ENSG00000266290.1] WARNING, no entry stored in dbm for [ENSG00000197536.11] WARNING, no entry stored in dbm for [ENSG00000285887.1] WARNING, no entry stored in dbm for [ENSG00000284986.1] WARNING, no entry stored in dbm for [ENSG00000256092.2] WARNING, no entry stored in dbm for [ENSG00000204959.4] WARNING, no entry stored in dbm for [ENSG00000257122.5] WARNING, no entry stored in dbm for [ENSG00000260413.1] WARNING, no entry stored in dbm for [ENSG00000214331.8] WARNING, no entry stored in dbm for [ENSG00000232228.1] WARNING, no entry stored in dbm for [ENSG00000253945.1] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000238778.1] WARNING, no entry stored in dbm for [ENSG00000263069.6] WARNING, no entry stored in dbm for [ENSG00000201875.1] WARNING, no entry stored in dbm for [ENSG00000200794.1] WARNING, no entry stored in dbm for [ENSG00000269653.1] WARNING, no entry stored in dbm for [ENSG00000254722.1] WARNING, no entry stored in dbm for [ENSG00000237601.1] WARNING, no entry stored in dbm for [ENSG00000249859.12] WARNING, no entry stored in dbm for [ENSG00000224729.6] WARNING, no entry stored in dbm for [ENSG00000176753.5] WARNING, no entry stored in dbm for [ENSG00000273125.2] WARNING, no entry stored in dbm for [ENSG00000225470.8] WARNING, no entry stored in dbm for [ENSG00000262879.6] WARNING, no entry stored in dbm for [ENSG00000225469.3] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000224729.6] WARNING, no entry stored in dbm for [ENSG00000287433.1] WARNING, no entry stored in dbm for [ENSG00000230606.11] WARNING, no entry stored in dbm for [ENSG00000257906.3] WARNING, no entry stored in dbm for [ENSG00000273125.2] WARNING, no entry stored in dbm for [ENSG00000260917.1] WARNING, no entry stored in dbm for [ENSG00000232684.1] WARNING, no entry stored in dbm for [ENSG00000187621.15] WARNING, no entry stored in dbm for [ENSG00000255875.2] WARNING, no entry stored in dbm for [ENSG00000255875.2] WARNING, no entry stored in dbm for [ENSG00000223891.6] WARNING, no entry stored in dbm for [ENSG00000259424.1] WARNING, no entry stored in dbm for [ENSG00000183444.10] WARNING, no entry stored in dbm for [ENSG00000272449.2] WARNING, no entry stored in dbm for [ENSG00000232230.1] WARNING, no entry stored in dbm for [ENSG00000257489.6] WARNING, no entry stored in dbm for [ENSG00000261824.7] WARNING, no entry stored in dbm for [ENSG00000206337.12] WARNING, no entry stored in dbm for [ENSG00000283792.1] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000288549.1] WARNING, no entry stored in dbm for [ENSG00000287405.1] WARNING, no entry stored in dbm for [ENSG00000205361.8] WARNING, no entry stored in dbm for [ENSG00000198886.2] WARNING, no entry stored in dbm for [ENSG00000249899.6] WARNING, no entry stored in dbm for [ENSG00000235989.4] WARNING, no entry stored in dbm for [ENSG00000236172.7] WARNING, no entry stored in dbm for [ENSG00000228526.7] WARNING, no entry stored in dbm for [ENSG00000267519.6] WARNING, no entry stored in dbm for [ENSG00000270069.1] WARNING, no entry stored in dbm for [ENSG00000274270.1] WARNING, no entry stored in dbm for [ENSG00000235848.4] WARNING, no entry stored in dbm for [ENSG00000255108.1] WARNING, no entry stored in dbm for [ENSG00000272267.2] WARNING, no entry stored in dbm for [ENSG00000267278.6] WARNING, no entry stored in dbm for [ENSG00000248973.3] WARNING, no entry stored in dbm for [ENSG00000233304.7] WARNING, no entry stored in dbm for [ENSG00000286295.1] WARNING, no entry stored in dbm for [ENSG00000247708.8] WARNING, no entry stored in dbm for [ENSG00000251580.3] WARNING, no entry stored in dbm for [ENSG00000228159.2] WARNING, no entry stored in dbm for [ENSG00000234928.1] WARNING, no entry stored in dbm for [ENSG00000227755.1] WARNING, no entry stored in dbm for [ENSG00000232100.1] WARNING, no entry stored in dbm for [ENSG00000255171.7] WARNING, no entry stored in dbm for [ENSG00000251396.7] WARNING, no entry stored in dbm for [ENSG00000224259.7] WARNING, no entry stored in dbm for [ENSG00000233117.4] WARNING, no entry stored in dbm for [ENSG00000255185.6] WARNING, no entry stored in dbm for [ENSG00000237854.3] WARNING, no entry stored in dbm for [ENSG00000277476.1] WARNING, no entry stored in dbm for [ENSG00000276758.1] WARNING, no entry stored in dbm for [ENSG00000224729.6] WARNING, no entry stored in dbm for [ENSG00000255815.3] WARNING, no entry stored in dbm for [ENSG00000229222.1] WARNING, no entry stored in dbm for [ENSG00000281344.1] WARNING, no entry stored in dbm for [ENSG00000260338.2] WARNING, no entry stored in dbm for [ENSG00000240761.1] WARNING, no entry stored in dbm for [ENSG00000229880.1] WARNING, no entry stored in dbm for [ENSG00000183199.6] WARNING, no entry stored in dbm for [ENSG00000287579.1] WARNING, no entry stored in dbm for [ENSG00000229251.3] WARNING, no entry stored in dbm for [ENSG00000179362.14] WARNING, no entry stored in dbm for [ENSG00000214176.9] WARNING, no entry stored in dbm for [ENSG00000214433.4] WARNING, no entry stored in dbm for [ENSG00000249375.8] WARNING, no entry stored in dbm for [ENSG00000245904.4] WARNING, no entry stored in dbm for [ENSG00000268218.1] WARNING, no entry stored in dbm for [ENSG00000118976.5] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000247809.9] WARNING, no entry stored in dbm for [ENSG00000223652.2] WARNING, no entry stored in dbm for [ENSG00000251602.7] WARNING, no entry stored in dbm for [ENSG00000231528.3] WARNING, no entry stored in dbm for [ENSG00000231528.3] WARNING, no entry stored in dbm for [ENSG00000223566.1] WARNING, no entry stored in dbm for [ENSG00000229124.7] WARNING, no entry stored in dbm for [ENSG00000234152.1] WARNING, no entry stored in dbm for [ENSG00000177359.20] WARNING, no entry stored in dbm for [ENSG00000278903.3] WARNING, no entry stored in dbm for [ENSG00000230239.1] WARNING, no entry stored in dbm for [ENSG00000268287.1] WARNING, no entry stored in dbm for [ENSG00000257817.2] WARNING, no entry stored in dbm for [ENSG00000231646.6] WARNING, no entry stored in dbm for [ENSG00000229358.3] WARNING, no entry stored in dbm for [ENSG00000221844.2] WARNING, no entry stored in dbm for [ENSG00000279726.2] WARNING, no entry stored in dbm for [ENSG00000224533.4] WARNING, no entry stored in dbm for [ENSG00000254275.6] WARNING, no entry stored in dbm for [ENSG00000222041.11] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000280018.4] WARNING, no entry stored in dbm for [ENSG00000080947.15] WARNING, no entry stored in dbm for [ENSG00000236008.3] WARNING, no entry stored in dbm for [ENSG00000168405.17] WARNING, no entry stored in dbm for [ENSG00000237945.7] WARNING, no entry stored in dbm for [ENSG00000259755.1] WARNING, no entry stored in dbm for [ENSG00000204790.9] WARNING, no entry stored in dbm for [ENSG00000225339.4] WARNING, no entry stored in dbm for [ENSG00000277449.1] WARNING, no entry stored in dbm for [ENSG00000223773.7] WARNING, no entry stored in dbm for [ENSG00000251264.1] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000260693.1] WARNING, no entry stored in dbm for [ENSG00000236060.2] WARNING, no entry stored in dbm for [ENSG00000226983.3] WARNING, no entry stored in dbm for [ENSG00000251209.9] WARNING, no entry stored in dbm for [ENSG00000204352.4] WARNING, no entry stored in dbm for [ENSG00000261393.1] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000283541.1] WARNING, no entry stored in dbm for [ENSG00000254783.1] WARNING, no entry stored in dbm for [ENSG00000279649.1] WARNING, no entry stored in dbm for [ENSG00000224729.6] WARNING, no entry stored in dbm for [ENSG00000259225.7] WARNING, no entry stored in dbm for [ENSG00000232800.1] WARNING, no entry stored in dbm for [ENSG00000224729.6] WARNING, no entry stored in dbm for [ENSG00000286167.1] WARNING, no entry stored in dbm for [ENSG00000273986.1] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000273387.1] WARNING, no entry stored in dbm for [ENSG00000254765.1] WARNING, no entry stored in dbm for [ENSG00000218732.1] WARNING, no entry stored in dbm for [ENSG00000204790.9] WARNING, no entry stored in dbm for [ENSG00000286961.1] WARNING, no entry stored in dbm for [ENSG00000255136.3] WARNING, no entry stored in dbm for [ENSG00000273199.1] WARNING, no entry stored in dbm for [ENSG00000286536.1] WARNING, no entry stored in dbm for [ENSG00000261025.1] WARNING, no entry stored in dbm for [ENSG00000227619.3] WARNING, no entry stored in dbm for [ENSG00000279631.1] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [ENSG00000229862.5] WARNING, no entry stored in dbm for [ENSG00000285646.2] WARNING, no entry stored in dbm for [ENSG00000285887.1] WARNING, no entry stored in dbm for [ENSG00000286459.1] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000266931.2] WARNING, no entry stored in dbm for [ENSG00000188460.4] WARNING, no entry stored in dbm for [ENSG00000247151.7] WARNING, no entry stored in dbm for [ENSG00000231668.2] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000286830.1] WARNING, no entry stored in dbm for [ENSG00000250999.2] WARNING, no entry stored in dbm for [ENSG00000214135.8] WARNING, no entry stored in dbm for [ENSG00000282692.1] WARNING, no entry stored in dbm for [ENSG00000286619.1] WARNING, no entry stored in dbm for [ENSG00000286619.1] WARNING, no entry stored in dbm for [ENSG00000277511.1] WARNING, no entry stored in dbm for [ENSG00000250049.7] WARNING, no entry stored in dbm for [ENSG00000248376.2] WARNING, no entry stored in dbm for [ENSG00000213661.3] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000254035.1] WARNING, no entry stored in dbm for [ENSG00000259727.1] WARNING, no entry stored in dbm for [ENSG00000228981.3] WARNING, no entry stored in dbm for [ENSG00000287931.1] WARNING, no entry stored in dbm for [ENSG00000248126.1] WARNING, no entry stored in dbm for [ENSG00000266283.1] WARNING, no entry stored in dbm for [ENSG00000287105.1] WARNING, no entry stored in dbm for [ENSG00000234129.8] WARNING, no entry stored in dbm for [ENSG00000257817.2] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000256694.1] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000286207.1] WARNING, no entry stored in dbm for [ENSG00000268636.1] WARNING, no entry stored in dbm for [ENSG00000270504.1] WARNING, no entry stored in dbm for [ENSG00000269025.2] WARNING, no entry stored in dbm for [ENSG00000270087.5] WARNING, no entry stored in dbm for [ENSG00000267345.1] WARNING, no entry stored in dbm for [ENSG00000238045.9] WARNING, no entry stored in dbm for [ENSG00000214331.8] WARNING, no entry stored in dbm for [ENSG00000273557.1] WARNING, no entry stored in dbm for [ENSG00000253955.2] WARNING, no entry stored in dbm for [ENSG00000270453.1] WARNING, no entry stored in dbm for [ENSG00000286739.1] WARNING, no entry stored in dbm for [ENSG00000277458.1] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000265287.2] WARNING, no entry stored in dbm for [ENSG00000277476.1] WARNING, no entry stored in dbm for [ENSG00000227757.3] WARNING, no entry stored in dbm for [ENSG00000248015.7] WARNING, no entry stored in dbm for [ENSG00000258695.2] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000230305.2] * STAR-Fusion complete. See output: /tmp/nxf.A6DtlzMNVR/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)