File Info
- Filename
- aih-tih-sc-97c26d-R1_B23WHYVLT4_1.fusions.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/67/3ea6b5fc6bd982740e4940491f57f6/aih-tih-sc-97c26d-R1_B23WHYVLT4_1.fusions.csv
- Size
- 4.2 KB
- Task
- NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (aih-tih-sc-97c26d-R1_B23WHYVLT4_1)
- Attempt
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| H4-16--CD163 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr12:14770679#chr12:7488087,reading-frame: .,type: deletion,split_reads1: 1,split_reads2: 22,discordant_mates: 0,coverage1: 76,coverage2: 362,confidence: high | position: chr12:14770679:-#chr12:7488087:-,junction_reads: 23,spanning_reads: 0,ffmp: 0.2083 | |
| HS3ST3B1--ZNF287 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr17:14302072#chr17:16553426,reading-frame: out-of-frame,type: inversion,split_reads1: 5,split_reads2: 15,discordant_mates: 0,coverage1: 453,coverage2: 150,confidence: high | position: chr17:14302072:+#chr17:16553426:-,junction_reads: 22,spanning_reads: 0,ffmp: 0.1992 | |
| HS3ST3B1--LRRC75A | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr17:14302072#chr17:16462386,reading-frame: out-of-frame,type: inversion,split_reads1: 2,split_reads2: 17,discordant_mates: 0,coverage1: 453,coverage2: 423,confidence: high | position: chr17:14302072:+#chr17:16462386:-,junction_reads: 19,spanning_reads: 0,ffmp: 0.172 | |
| SMG1P1--GAS7 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr16:22437492:+#chr17:10019897:-,junction_reads: 11,spanning_reads: 0,ffmp: 0.0498 | ||
| PURB--CDHR3 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr7:44882858:-#chr7:106030792:+,junction_reads: 11,spanning_reads: 0,ffmp: 0.0996 | ||
| MAP2--ERBB4 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr2:209507641#chr2:212124903,reading-frame: .,type: inversion,split_reads1: 7,split_reads2: 3,discordant_mates: 0,coverage1: 23,coverage2: 4520,confidence: high | position: chr2:209507641:+#chr2:212124903:-,junction_reads: 11,spanning_reads: 0,ffmp: 0.0996 | |
| MPRIP--ASIC2 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr17:17161356#chr17:33028392,reading-frame: in-frame,type: inversion,split_reads1: 2,split_reads2: 7,discordant_mates: 0,coverage1: 478,coverage2: 99,confidence: high | position: chr17:17161356:+#chr17:33028392:-,junction_reads: 9,spanning_reads: 0,ffmp: 0.0815 | |
| ULK2--ANKRD30BP1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:19841489:-#chr21:13413790:-,junction_reads: 8,spanning_reads: 0,ffmp: 0.0724 | ||
| POLR3E--RNA5-8SP2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr16:22328587#chr16:34226366,reading-frame: out-of-frame,type: deletion,split_reads1: 19,split_reads2: 5,discordant_mates: 0,coverage1: 2223,coverage2: 63,confidence: high | ||
| POLR3E--BCLAF1P2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr16:22328587#chr16:34226366,reading-frame: out-of-frame,type: deletion,split_reads1: 19,split_reads2: 5,discordant_mates: 0,coverage1: 2223,coverage2: 63,confidence: high | ||
| TVP23C--CDRT4 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr17:15545785#chr17:15440285,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 11,split_reads2: 12,discordant_mates: 0,coverage1: 771,coverage2: 268,confidence: high | |
| TXNDC11--AC109495.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr16:11730645#chr16:17762322,reading-frame: out-of-frame,type: inversion,split_reads1: 11,split_reads2: 1,discordant_mates: 0,coverage1: 1172,coverage2: 3,confidence: high | ||
| TXNDC11--AC025277.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr16:11730645#chr16:17762322,reading-frame: out-of-frame,type: inversion,split_reads1: 11,split_reads2: 1,discordant_mates: 0,coverage1: 1172,coverage2: 3,confidence: high | ||
| MPRIP--POLDIP2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:17042971#chr17:28348168,reading-frame: out-of-frame,type: deletion/5'-5',split_reads1: 7,split_reads2: 3,discordant_mates: 0,coverage1: 829,coverage2: 2173,confidence: high | ||
| SPNS1--ABCC1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr16:28979471#chr16:15997732,reading-frame: out-of-frame,type: inversion/3'-3',split_reads1: 7,split_reads2: 2,discordant_mates: 0,coverage1: 696,coverage2: 5,confidence: high | ||
| CRK--AC004253.2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:1436620#chr17:31851376,reading-frame: out-of-frame,type: inversion,split_reads1: 6,split_reads2: 2,discordant_mates: 0,coverage1: 316,coverage2: 3,confidence: high | ||
| CRK--COPRS | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:1436620#chr17:31851376,reading-frame: out-of-frame,type: inversion,split_reads1: 6,split_reads2: 2,discordant_mates: 0,coverage1: 316,coverage2: 3,confidence: high |
18 rows