Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/7ef2637f2fd9c7a0a7847658d9b0a2/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/7ef2637f2fd9c7a0a7847658d9b0a2/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/09dddab5469ffaf92efc8ac01cf1aa/aih-tih-sc-7c610c-R1_B23WHYVLT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/09dddab5469ffaf92efc8ac01cf1aa/aih-tih-sc-7c610c-R1_B23WHYVLT4_1_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory