.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (FFPE_V4_0002_RNA_0001_B23WHYVLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a2/0aec5f6454d8d356a132a7f7172fa3/.command.log
Size: 720 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (FFPE_V4_0002_RNA_0001_B23WHYVLT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7c/581934224744da0b5d447bbc1d3bf5/FFPE_V4_0002_RNA_0001_B23WHYVLT4_1.md.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a2/0aec5f6454d8d356a132a7f7172fa3/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a2/0aec5f6454d8d356a132a7f7172fa3/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7c/581934224744da0b5d447bbc1d3bf5/FFPE_V4_0002_RNA_0001_B23WHYVLT4_1.md.bai
==> STAGING COMPLETE (4 inputs)

+ seqtool saturation -region chr20 FFPE_V4_0002_RNA_0001_B23WHYVLT4_1.md.bam
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0002_RNA_0001_B23WHYVLT4_1.md.bai