Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e1/92ea70de7325eaa5e4e48d7b553477/aih-tih-sc-c55577-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/5ccf384c47b916a12766c6b8a738c8/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/5ccf384c47b916a12766c6b8a738c8/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory