Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9d/938abe7f19a8b6af90edbca74e3d06/aih-tih-sc-18a6f2-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/2a0f9c2e5d411e8ada5eb1a64e38cd/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/2a0f9c2e5d411e8ada5eb1a64e38cd/.command.run
==> STAGING COMPLETE (3 inputs)

PAIRED_END_BAM_INPUT
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paired = 190978757
unpaired = 3581081
MERGED PAIRED END READS = 190978757
MATES PROCESSED = 385538595
TOTAL READS     = 194559838
DISTINCT READS  = 4.34652e+07
DISTINCT COUNTS = 1800
MAX COUNT       = 742873
COUNTS OF 1     = 1.27375e+07
MAX TERMS       = 100
OBSERVED COUNTS (742874)
1	12737520
2	7762709
3	5730146
4	4284204
5	3169536
6	2328710
7	1706336
8	1250574
9	920870
10	684718
11	515614
12	392761
13	304593
14	238949
15	190593
16	154349
17	126437
18	105144
19	88918
20	75538
21	64529
22	55567
23	48554
24	42615
25	37425
26	32959
27	29430
28	26249
29	23351
30	20786
31	18885
32	16965
33	15443
34	13798
35	12673
36	11438
37	10496
38	9710
39	9040
40	8320
41	7483
42	7008
43	6484
44	6066
45	5667
46	5359
47	5087
48	4794
49	4477
50	4295
51	4054
52	3862
53	3631
54	3384
55	3243
56	2965
57	2835
58	2807
59	2687
60	2479
61	2534
62	2384
63	2249
64	2142
65	2111
66	1962
67	1924
68	1876
69	1899
70	1670
71	1645
72	1615
73	1560
74	1491
75	1393
76	1361
77	1329
78	1295
79	1260
80	1250
81	1148
82	1159
83	1161
84	1121
85	1070
86	1038
87	951
88	894
89	942
90	899
91	878
92	880
93	870
94	784
95	742
96	755
97	732
98	714
99	706
100	701
101	662
102	674
103	623
104	598
105	581
106	672
107	576
108	622
109	579
110	531
111	521
112	495
113	505
114	481
115	472
116	456
117	449
118	466
119	472
120	446
121	428
122	432
123	391
124	403
125	382
126	391
127	386
128	347
129	387
130	347
131	357
132	338
133	340
134	311
135	303
136	315
137	328
138	302
139	283
140	292
141	273
142	300
143	293
144	289
145	259
146	284
147	291
148	274
149	294
150	271
151	244
152	251
153	281
154	256
155	242
156	215
157	216
158	217
159	237
160	224
161	223
162	228
163	222
164	225
165	204
166	198
167	216
168	196
169	194
170	212
171	215
172	183
173	194
174	176
175	176
176	165
177	169
178	173
179	174
180	190
181	153
182	167
183	165
184	154
185	155
186	165
187	175
188	163
189	163
190	140
191	142
192	153
193	133
194	114
195	120
196	138
197	138
198	121
199	125
200	121
201	119
202	121
203	105
204	130
205	123
206	118
207	113
208	101
209	111
210	108
211	103
212	107
213	120
214	112
215	114
216	110
217	107
218	111
219	121
220	103
221	100
222	91
223	110
224	86
225	96
226	88
227	92
228	113
229	107
230	88
231	104
232	83
233	100
234	102
235	80
236	87
237	88
238	72
239	82
240	90
241	77
242	77
243	80
244	83
245	74
246	75
247	80
248	62
249	72
250	71
251	78
252	87
253	72
254	75
255	69
256	67
257	67
258	79
259	77
260	66
261	60
262	71
263	68
264	61
265	79
266	68
267	62
268	62
269	66
270	72
271	63
272	72
273	79
274	67
275	51
276	60
277	56
278	60
279	66
280	61
281	41
282	48
283	69
284	59
285	56
286	56
287	56
288	37
289	43
290	52
291	62
292	51
293	49
294	43
295	49
296	59
297	43
298	51
299	48
300	52
301	48
302	57
303	53
304	49
305	46
306	52
307	49
308	41
309	42
310	50
311	46
312	42
313	39
314	47
315	45
316	35
317	34
318	29
319	49
320	39
321	31
322	36
323	34
324	39
325	47
326	38
327	35
328	31
329	32
330	36
331	41
332	50
333	42
334	33
335	36
336	44
337	37
338	30
339	35
340	26
341	51
342	33
343	30
344	40
345	33
346	40
347	39
348	34
349	31
350	42
351	27
352	25
353	25
354	28
355	28
356	38
357	31
358	35
359	32
360	23
361	33
362	30
363	30
364	30
365	42
366	39
367	27
368	22
369	34
370	36
371	27
372	21
373	34
374	25
375	21
376	23
377	37
378	23
379	28
380	18
381	28
382	24
383	31
384	27
385	23
386	22
387	23
388	21
389	23
390	33
391	21
392	30
393	25
394	13
395	26
396	26
397	21
398	20
399	28
400	26
401	15
402	26
403	28
404	25
405	15
406	21
407	24
408	27
409	34
410	25
411	17
412	20
413	22
414	15
415	17
416	25
417	24
418	20
419	21
420	22
421	20
422	20
423	16
424	25
425	24
426	26
427	14
428	24
429	24
430	16
431	22
432	18
433	19
434	14
435	24
436	22
437	23
438	18
439	15
440	17
441	20
442	16
443	13
444	13
445	10
446	17
447	19
448	17
449	13
450	18
451	17
452	18
453	16
454	18
455	14
456	20
457	20
458	10
459	17
460	15
461	20
462	6
463	17
464	18
465	19
466	16
467	14
468	11
469	24
470	12
471	12
472	14
473	10
474	22
475	14
476	15
477	16
478	14
479	17
480	11
481	17
482	11
483	16
484	9
485	15
486	18
487	11
488	9
489	19
490	12
491	9
492	18
493	11
494	12
495	10
496	17
497	15
498	8
499	12
500	10
501	16
502	11
503	9
504	9
505	14
506	12
507	16
508	11
509	11
510	13
511	8
512	15
513	13
514	6
515	13
516	8
517	12
518	12
519	9
520	6
521	12
522	8
523	14
524	7
525	16
526	16
527	4
528	8
529	11
530	13
531	14
532	15
533	11
534	5
535	13
536	9
537	7
538	21
539	11
540	12
541	7
542	6
543	12
544	11
545	15
546	9
547	10
548	5
549	14
550	4
551	10
552	10
553	13
554	8
555	9
556	5
557	8
558	7
559	7
560	8
561	15
562	11
563	11
564	11
565	6
566	2
567	12
568	11
569	8
570	9
571	9
572	9
573	4
574	9
575	6
576	7
577	6
578	14
579	12
580	8
581	9
582	10
583	8
584	9
585	17
586	10
587	4
588	5
589	7
590	9
591	10
592	12
593	11
594	5
595	9
596	10
597	15
598	9
599	16
600	7
601	3
602	12
603	9
604	8
605	10
606	5
607	8
608	5
609	9
610	10
611	6
612	7
613	3
614	5
615	5
616	9
617	14
618	12
619	5
620	10
621	13
622	8
623	16
624	11
625	10
626	9
627	8
628	6
629	5
630	11
631	7
632	12
633	3
634	15
635	6
636	8
637	1
638	5
639	5
640	5
641	7
642	9
643	5
644	4
645	10
646	10
647	2
648	7
649	8
650	5
651	9
652	3
653	4
654	8
655	3
656	5
657	11
658	6
659	5
660	3
661	4
662	7
663	7
664	8
665	12
666	11
667	5
668	4
669	7
670	6
671	9
672	7
673	5
674	3
675	3
676	7
677	8
678	9
679	8
680	4
681	8
682	7
683	3
684	8
685	12
686	1
687	4
688	3
689	11
690	7
691	2
692	4
693	5
694	4
695	3
696	3
697	7
698	6
699	6
700	8
701	12
702	2
703	6
704	5
705	6
706	4
707	5
708	12
709	8
710	9
711	5
712	7
713	1
714	5
715	5
716	3
717	10
718	9
719	4
720	4
721	6
722	6
723	5
724	4
725	2
726	5
727	3
728	6
729	8
730	6
731	11
732	4
733	6
734	5
735	8
736	5
737	3
738	4
739	5
740	5
741	2
742	4
743	4
744	2
745	6
746	6
747	3
748	4
749	4
750	2
751	3
752	3
753	4
754	2
755	3
756	4
757	3
758	3
759	4
760	5
761	3
762	4
763	4
764	5
765	5
766	10
767	4
768	2
769	6
770	3
771	6
772	2
773	7
774	2
775	3
776	8
777	3
778	6
779	3
780	6
781	3
782	6
783	7
784	4
785	4
786	2
787	2
788	6
789	4
790	2
791	4
792	7
793	2
794	5
795	3
796	5
797	6
799	1
800	3
801	6
802	3
803	3
804	3
805	3
806	4
807	2
808	2
809	6
810	6
811	2
812	4
813	2
814	3
816	5
818	5
819	4
820	10
821	4
822	2
823	4
824	5
825	4
826	2
827	3
828	4
829	5
830	9
831	8
832	3
833	4
834	3
835	3
836	2
837	4
838	1
839	5
840	3
841	2
842	7
843	4
844	5
845	2
846	3
847	4
848	4
849	9
850	3
851	8
852	2
853	3
854	3
855	1
856	2
857	5
858	4
859	7
860	2
861	3
862	1
863	2
864	4
865	5
866	1
867	3
868	9
869	3
870	2
871	2
872	2
873	1
874	4
875	6
876	3
877	3
878	3
879	2
880	3
881	1
882	4
883	2
884	2
885	2
886	4
887	4
888	1
889	2
890	2
891	4
892	5
893	5
895	5
896	2
897	2
898	2
899	2
900	3
901	4
902	2
903	1
904	2
905	5
906	1
907	9
908	3
910	3
911	1
912	1
913	1
914	1
915	3
916	3
917	6
918	3
919	2
920	5
921	1
922	3
923	1
924	9
925	2
926	6
927	1
929	1
930	5
931	2
932	4
933	6
934	1
935	3
936	1
937	2
938	7
940	2
942	1
943	2
944	2
945	1
946	1
947	2
948	3
949	2
950	5
951	5
952	1
953	4
954	2
955	5
956	3
957	3
959	1
960	2
961	1
962	2
963	1
964	2
966	4
967	2
968	3
969	2
970	1
971	6
972	5
973	5
974	4
976	2
977	3
978	1
979	2
981	1
983	1
984	1
985	2
986	4
987	3
988	3
989	2
990	3
991	1
992	3
993	2
994	2
995	6
997	3
998	1
999	2
1000	2
1002	6
1003	4
1004	2
1005	2
1006	2
1007	1
1008	3
1009	1
1011	1
1012	2
1014	2
1015	4
1016	1
1017	1
1019	3
1020	2
1021	1
1022	3
1023	1
1024	2
1025	1
1026	1
1027	2
1028	4
1029	2
1030	3
1031	4
1032	1
1033	1
1034	4
1035	4
1036	2
1037	2
1038	2
1039	3
1040	4
1042	1
1043	2
1044	4
1045	3
1046	1
1047	1
1048	2
1049	2
1050	2
1051	2
1052	4
1053	1
1054	1
1055	1
1056	1
1057	5
1058	5
1059	1
1060	2
1061	1
1062	1
1063	1
1064	1
1065	4
1066	3
1068	2
1069	3
1070	3
1072	2
1073	2
1074	1
1075	6
1076	1
1077	2
1078	1
1079	1
1080	3
1081	2
1082	2
1085	2
1086	2
1087	1
1088	5
1089	1
1090	1
1091	2
1092	1
1093	3
1094	2
1096	3
1097	5
1098	1
1099	2
1100	2
1101	2
1102	1
1103	2
1104	2
1105	2
1106	2
1107	1
1108	1
1110	1
1111	2
1112	1
1113	3
1114	2
1117	1
1118	2
1119	2
1120	1
1121	1
1124	1
1125	3
1126	2
1128	1
1129	1
1130	3
1134	3
1135	4
1136	1
1137	3
1138	2
1139	2
1140	3
1141	1
1142	2
1143	2
1144	2
1145	3
1149	2
1150	2
1152	2
1155	4
1156	1
1157	1
1158	1
1159	1
1160	1
1161	4
1164	4
1165	2
1166	1
1167	2
1168	2
1169	2
1170	1
1171	1
1172	2
1173	4
1174	2
1175	3
1177	2
1179	2
1181	3
1183	2
1184	1
1185	1
1186	1
1188	1
1189	2
1190	1
1191	2
1193	1
1194	3
1195	1
1198	1
1199	2
1200	3
1201	1
1203	1
1204	3
1205	1
1207	1
1208	3
1209	3
1210	3
1211	1
1212	2
1213	2
1214	2
1216	1
1217	3
1218	2
1219	2
1220	2
1221	1
1222	3
1223	3
1228	1
1229	3
1230	1
1231	1
1232	3
1234	1
1237	2
1239	1
1242	2
1243	1
1244	1
1246	1
1247	1
1249	1
1250	1
1251	3
1252	1
1253	2
1255	3
1256	1
1257	2
1258	4
1259	3
1260	2
1261	1
1262	2
1265	1
1268	1
1270	2
1271	1
1272	4
1273	4
1274	1
1275	2
1276	1
1277	2
1280	2
1282	1
1283	1
1284	2
1285	1
1286	2
1287	2
1288	1
1289	3
1291	1
1292	2
1293	2
1294	2
1296	1
1298	1
1300	1
1304	1
1306	1
1307	2
1308	2
1309	3
1310	3
1311	1
1312	1
1313	1
1316	1
1317	1
1319	2
1320	1
1321	1
1323	3
1324	2
1329	2
1330	1
1333	1
1334	1
1335	2
1337	1
1338	1
1339	1
1341	2
1342	1
1344	1
1345	2
1346	1
1347	1
1348	2
1349	3
1350	1
1351	1
1353	1
1354	2
1356	1
1357	2
1360	1
1361	2
1362	1
1364	2
1365	1
1366	1
1367	1
1371	2
1372	1
1373	1
1374	1
1376	1
1377	3
1379	2
1380	2
1381	1
1383	2
1385	1
1386	2
1388	2
1389	1
1391	1
1392	2
1394	1
1395	4
1398	2
1399	1
1401	1
1403	2
1404	1
1405	1
1406	2
1407	2
1409	1
1410	1
1418	1
1420	2
1421	1
1425	2
1426	1
1428	1
1431	1
1433	3
1435	2
1438	1
1439	2
1440	1
1443	1
1445	1
1447	1
1448	1
1452	1
1453	1
1454	1
1457	5
1459	1
1460	1
1461	1
1462	1
1463	1
1464	1
1466	2
1470	1
1471	1
1472	1
1473	1
1476	1
1477	3
1478	1
1479	1
1481	3
1482	2
1483	1
1485	3
1486	3
1487	1
1488	2
1489	1
1491	2
1492	1
1493	1
1495	1
1496	1
1497	1
1498	2
1500	1
1501	1
1502	1
1503	1
1504	2
1505	1
1508	1
1509	2
1510	1
1511	1
1513	1
1517	1
1518	1
1520	1
1521	1
1522	2
1525	1
1526	1
1527	1
1530	1
1531	2
1536	4
1537	1
1539	1
1540	1
1542	1
1543	3
1544	2
1547	1
1549	1
1550	2
1552	1
1555	2
1556	1
1560	1
1562	2
1563	1
1564	3
1565	1
1567	1
1570	1
1572	1
1576	2
1577	1
1578	1
1579	2
1581	1
1583	2
1585	1
1588	1
1591	1
1595	1
1598	3
1600	1
1602	1
1605	1
1606	1
1611	2
1613	2
1616	1
1617	2
1618	2
1620	1
1623	1
1624	1
1626	1
1628	2
1631	1
1633	3
1636	1
1639	2
1642	1
1644	1
1646	1
1650	2
1651	1
1654	1
1655	1
1656	1
1658	1
1661	1
1668	1
1669	1
1670	1
1675	1
1677	1
1679	1
1680	1
1681	1
1683	1
1684	1
1694	2
1695	2
1696	1
1701	1
1708	1
1710	2
1711	1
1712	1
1715	1
1720	1
1721	2
1723	1
1726	2
1727	2
1728	1
1730	1
1731	1
1741	1
1742	1
1743	1
1745	2
1749	1
1750	1
1751	2
1752	1
1754	2
1755	1
1762	2
1764	1
1768	1
1777	2
1778	2
1780	1
1781	1
1787	1
1789	1
1801	1
1802	1
1803	2
1806	1
1821	1
1824	1
1826	1
1827	1
1832	1
1834	1
1837	1
1841	2
1842	1
1843	1
1846	1
1849	1
1851	1
1853	2
1857	1
1858	1
1859	1
1862	1
1863	1
1866	2
1869	1
1870	1
1871	2
1873	2
1878	1
1884	1
1886	1
1890	1
1893	1
1898	1
1908	2
1912	1
1917	1
1918	1
1920	1
1921	1
1922	1
1927	1
1928	1
1930	1
1931	1
1937	1
1940	1
1942	1
1945	1
1946	1
1950	1
1952	1
1955	1
1956	1
1957	1
1961	1
1963	2
1964	1
1970	1
1972	1
1974	1
1975	2
1976	1
1977	1
1984	2
1985	1
1986	1
1990	1
1992	2
1996	1
1999	1
2000	1
2003	1
2007	2
2008	1
2011	1
2014	2
2015	1
2016	2
2022	1
2026	1
2037	1
2038	1
2040	1
2041	1
2049	1
2061	1
2064	1
2072	1
2079	1
2080	1
2085	1
2088	2
2093	1
2096	1
2104	1
2112	1
2119	1
2126	1
2130	1
2134	1
2140	1
2146	1
2151	1
2158	1
2160	1
2162	1
2164	1
2165	1
2170	1
2173	1
2180	1
2185	1
2188	1
2191	1
2193	1
2194	1
2198	1
2202	2
2219	1
2220	1
2222	1
2225	1
2229	1
2230	1
2231	1
2232	1
2236	1
2239	1
2241	1
2248	1
2249	1
2253	2
2254	1
2273	1
2274	1
2281	1
2283	1
2302	1
2304	1
2309	1
2311	1
2319	1
2322	1
2326	1
2328	2
2334	1
2337	2
2345	1
2346	1
2357	1
2362	1
2369	1
2372	1
2376	1
2382	1
2388	1
2395	1
2396	1
2404	1
2413	2
2416	1
2417	1
2421	1
2422	1
2426	1
2431	1
2447	1
2470	2
2480	1
2493	1
2497	1
2508	1
2518	1
2520	2
2521	1
2530	1
2533	1
2536	1
2541	1
2544	1
2549	1
2558	1
2564	1
2565	1
2584	1
2589	1
2599	1
2602	1
2604	1
2609	1
2627	1
2631	1
2643	1
2644	1
2648	1
2657	1
2661	1
2679	1
2683	1
2733	1
2760	1
2764	1
2778	1
2788	1
2790	1
2794	1
2798	1
2803	1
2809	1
2827	1
2830	1
2840	1
2854	1
2880	2
2900	1
2901	1
2903	1
2909	1
2921	1
2930	1
2950	1
2952	1
2999	1
3005	1
3013	1
3020	1
3036	1
3040	1
3049	1
3052	1
3061	1
3065	1
3093	2
3101	1
3105	1
3112	1
3134	1
3143	1
3160	1
3227	1
3241	1
3246	1
3259	1
3264	1
3280	1
3287	1
3295	1
3316	1
3322	1
3335	1
3350	1
3351	1
3393	1
3400	1
3470	1
3510	1
3512	1
3575	1
3594	1
3601	1
3605	1
3626	1
3671	1
3680	1
3696	1
3703	1
3708	1
3713	1
3727	1
3735	1
3742	1
3754	2
3761	1
3778	1
3815	1
3867	1
3868	1
3895	1
3905	1
4012	1
4023	1
4027	1
4041	1
4069	1
4190	1
4193	1
4206	1
4220	1
4314	1
4341	1
4353	1
4641	1
4675	1
4682	1
4742	1
4791	1
4846	1
4909	1
5076	1
5081	1
5108	1
5115	1
5129	1
5154	1
5231	1
5327	1
6057	1
6291	1
6494	1
6575	1
6715	1
6717	1
6808	1
7067	1
7200	1
7253	1
7462	1
7533	1
8152	1
10700	1
12445	1
14749	1
15339	1
21709	1
27482	1
742873	1

[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
._...._...__._...._.._.._.__._........_._......._._..._.._._.......__...
....__..._............._._.___....._..._.....__.............
[COMPUTING CONFIDENCE INTERVALS]
[WRITING OUTPUT]