Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/60ed2737b146ef18f525f067027e7a/aih-tih-sc-37dd87-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/013786bf60e48795a82bf865049234/ref_annot.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/9dfe12ad70f2156c76ee501f8259b7/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/9dfe12ad70f2156c76ee501f8259b7/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/0f55d65d70970a51c7e941a8ab0b71/aih-tih-sc-37dd87-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam
==> STAGING COMPLETE (5 inputs)

null device 
          1 
null device 
          1 
total = 336098816
[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-37dd87-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	336098816
Known Splicing Events:	333225037
Partial Novel Splicing Events:	1848917
Novel Splicing Events:	936990
Filtered Splicing Events:	87872

Total splicing  Junctions:	600263
Known Splicing Junctions:	284855
Partial Novel Splicing Junctions:	187365
Novel Splicing Junctions:	128043

===================================================================
Create BED file ...
Create Interact file ...