AIH curated blacklist: matched 2 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 96
Pass (FILTER=PASS): 11 (11.5%)
Fail (FILTER=FAIL): 85 (88.5%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 2
All 2 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 22
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(low<high): 9
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 4
confidence_below_min(medium<high): 3
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 3
total_reads_below_min(3.0<8.0): 2
confidence_below_min(medium<high);aih_curated_blacklist: 2
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 2
total_reads_below_min(7.0<8.0): 1
total_reads_below_min(6.0<8.0): 1
total_reads_below_min(4.0<8.0): 1
Breakdown by confidence:
high: 11 pass, 5 fail (total: 16)
low: 0 pass, 34 fail (total: 34)
medium: 0 pass, 46 fail (total: 46)
Arriba filter: 96 rows -> 11 PASS; wrote aih-tih-sc-62dadb-R1_B23WHYVLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-62dadb-R1_B23WHYVLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-62dadb-R1_B23WHYVLT4_1.arriba.fusions.filter_summary.txt