Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/1f1f6a2a4221906cea2b92e4132536/aih-tih-sc-a3a521-R1_B23WHYVLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/11/fbffaf3b44a59031d531044f3820d9/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/11/fbffaf3b44a59031d531044f3820d9/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory